RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Zfp949E9Q732 603 aa9.79□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Gm1979E9QAN3 267 aa9.79□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Gm21671G3UY31 267 aa9.79□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Zfp715G3X9T1 886 aa9.79□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Csf1P07141 552 aa9.79□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 GabrdP22933 449 aa9.79□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Sf3b6P59708 125 aaKnown RBP9.79□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Enox1Q8BHR2 643 aaKnown RBP9.79□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Pnma3Q8JZW8 466 aa9.79□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Serinc2Q8K0E7 450 aa9.79□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Chst15Q91XQ5 561 aa9.79□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Ly6iQ9WU67 134 aa9.79□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Knop1Q9Z2Q2 478 aaKnown RBP9.79□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Depdc5P61460 1591 aa9.79□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 NesQ6P5H2 1864 aaKnown RBP9.79□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Abca8bQ8K440 1620 aa9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Fignl2J3QK54 644 aa9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Vamp4O70480 141 aa9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 GdnfP48540 211 aa9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Nup43P59235 380 aa9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Gsk3aQ2NL51 490 aa9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 DtlQ3TLR7 729 aa9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Armcx5Q3UZB0 606 aa9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Krt72Q6IME9 520 aa9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 B4galnt3Q6L8S8 986 aa9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Cpsf6Q6NVF9 551 aaKnown RBP9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Ankib1Q6ZPS6 1085 aa9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Mtmr6Q8VE11 617 aa9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Nop2Q922K7 793 aaKnown RBP9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Kif19Q99PT9 997 aa9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Arhgef11Q68FM7 1552 aa9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Arap1Q4LDD4 1452 aa9.78□□□□□ -0.84
Ccdc54-201ENSMUST00000062439 Setd5Q5XJV7 1441 aa9.77□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Atp10dQ8K2X1 1416 aa9.77□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Gm5152L7N200 190 aa9.77□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 MstnO08689 376 aa9.77□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Pabpc1P29341 636 aaKnown RBP9.77□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Ybx1P62960 322 aaKnown RBP9.77□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 C87499Q3UX49 493 aa9.77□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Tab3Q571K4 716 aa9.77□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Tmem151bQ68FE7 561 aa9.77□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 LppQ8BFW7 613 aa9.77□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 NsmfQ99NF2 532 aa9.77□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Pidd1Q9ERV7 915 aa9.77□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Fancd2Q80V62 1450 aa9.77□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Zfyve16Q80U44 1528 aa9.77□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Kif27Q7M6Z4 1394 aa9.76□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Eea1Q8BL66 1411 aa9.76□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Cyp26a1O55127 497 aa9.76□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Man1c1Q6NXK9 625 aa9.76□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Myo1hQ9D6A1 958 aa9.76□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Gm21981D3Z6Q6 369 aa9.75□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Dsc1P55849 886 aa9.75□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Hsf5Q5ND04 624 aa9.75□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Cyb5d2Q5SSH8 263 aa9.75□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 FcgrtQ61559 365 aa9.75□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Cyfip1Q7TMB8 1253 aa9.75□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Fam214bQ8BR27 538 aa9.75□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Cmtm4Q8CJ61 208 aa9.75□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Vmn1r24Q8R2D6 296 aa9.75□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Rhobtb2Q91V93 728 aa9.75□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Mkrn2Q9ERV1 416 aaKnown RBP9.75□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Cdc42bpaQ3UU96 1719 aa9.75□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 AglF8VPN4 1532 aa9.75□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Magi1Q6RHR9 1471 aa9.74□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 P01649 108 aa9.74□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Col6a2Q02788 1034 aa9.74□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Nom1Q3UFM5 854 aaKnown RBP9.74□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Slc10a7Q5PT53 340 aa9.74□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Heatr6Q6P1G0 1184 aaKnown RBP9.74□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Cyp26b1Q811W2 512 aa9.74□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Slco4c1Q8BGD4 722 aa9.74□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Mrpl49Q9CQ40 166 aa9.74□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Vwa7Q9JHA8 891 aa9.74□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Gipc2Q9Z2H7 314 aa9.74□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Prex2Q3LAC4 1598 aa9.74□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Tmem92B7ZWI3 162 aa9.73□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Myl1P05977 188 aa9.73□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Pou4f1P17208 421 aa9.73□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Bpifa1P97361 278 aa9.73□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Ppm1hQ3UYC0 513 aa9.73□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Adam1aQ60813 791 aa9.73□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Ripor1Q68FE6 1223 aa9.73□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Rnf214Q8BFU3 668 aaKnown RBP9.73□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Neto1Q8R4I7 533 aa9.73□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Ttc1Q91Z38 292 aa9.73□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Ppp1r3gQ9CW07 347 aa9.73□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Nif3l1Q9EQ80 376 aa9.73□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Bcar3Q9QZK2 820 aa9.73□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Fbln5Q9WVH9 448 aa9.73□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Klrc1Q9Z202 244 aa9.73□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Apol8A2VDH7 339 aaKnown RBP9.72□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Ptch2O35595 1182 aa9.72□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Pde8aO88502 823 aa9.72□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Csf1rP09581 977 aa9.72□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 FasP25446 327 aa9.72□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Fosl1P48755 273 aa9.72□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Ephb3P54754 993 aaKnown RBP9.72□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 Znf569Q80W31 679 aa9.72□□□□□ -0.85
Ccdc54-201ENSMUST00000062439 FntbQ8K2I1 437 aa9.72□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms