RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Znf830Q8R1N0 363 aaKnown RBP11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Pcdhb15Q91Y04 786 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Sept14Q9DA97 430 aa11.38□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Sema3fO88632 785 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Lmnb2P21619 596 aaKnown RBP11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Dact3Q0PHV7 610 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 WaplQ65Z40 1200 aaKnown RBP11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Znf526Q8BI66 675 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Terb1Q8C0V1 768 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Alx1Q8C8B0 326 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 McamQ8R2Y2 648 aaKnown RBP11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Ttll1Q91V51 423 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Ppp2r5dQ91V89 594 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Ulk4Q3V129 1303 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Ehbp1l1Q99MS7 1716 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Gm38392E9Q2A2 434 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Rbm15bQ6PHZ5 887 aaKnown RBP11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Krt9Q6RHW0 743 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Dnm3Q8BZ98 863 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Gpcpd1Q8C0L9 675 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Psmd2Q8VDM4 908 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Ribc1Q9D0B8 379 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Fam217aQ9D9W6 419 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 IcoslgQ9JHJ8 322 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Mroh8E9PYI4 1049 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Samd15F6XZJ7 620 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Acap3Q6NXL5 833 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Slc51bQ80WK2 128 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Kcnv2Q8CFS6 562 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Arl6ip4Q9JM93 229 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 H2-OaQ9QWV1 250 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Caprin2Q05A80 1031 aaKnown RBP11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Wdr70Q3TWF6 657 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Lamc2Q61092 1191 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Clec16aQ80U30 1036 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Bsdc1Q80Y55 427 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Ppm1mQ8BU27 406 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 IarsQ8BU30 1262 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Atp6v0a4Q920R6 833 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Stx17Q9D0I4 301 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Q9DAQ4 598 aa11.37□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Rnf123Q5XPI3 1314 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Sik3Q6P4S6 1311 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Trim59Q922Y2 403 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Abcb6Q9DC29 842 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Gja10Q9WUS4 505 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Bfsp1A2AMT1 669 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Gna14P30677 355 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Samsn1P57725 372 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Wdr3Q8BHB4 942 aaKnown RBP11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Spata4Q8K3V1 295 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 DexiQ9WUQ7 95 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Trpm1Q2TV84 1622 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Acad12D3Z7X0 555 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Rab34Q64008 259 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Jade3Q6IE82 823 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Gigyf2Q6Y7W8 1291 aaKnown RBP11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Tmx4Q8C0L0 335 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Nr2e3Q9QXZ7 395 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Gm4297D3YWB7 211 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Krt78E9Q0F0 1068 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Casp12O08736 419 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Exosc10P56960 887 aaKnown RBP11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Tex35Q14BK3 207 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Anks6Q6GQX6 883 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Krt77Q6IFZ6 572 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Fgd5Q80UZ0 1219 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Scyl2Q8CFE4 930 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Msantd4Q91YU3 345 aa11.36□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Rgs12Q8CGE9 1381 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Lins1Q3U1D0 764 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Ovgp1Q62010 721 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 SnrkQ8VDU5 748 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Tsnaxip1Q99P25 704 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Thap12Q9CUX1 758 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 NkapQ9D0F4 415 aaKnown RBP11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Saal1Q9D2C2 474 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Krt34Q9D646 392 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Styxl1Q9DAR2 321 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Taok1Q5F2E8 1001 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Bbs9Q811G0 885 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Rcor2Q8C796 523 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 PdclQ9DBX2 301 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Abcc10Q8R4P9 1501 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Anks1aP59672 1150 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Dok7Q18PE0 504 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Pank4Q80YV4 820 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Strip1Q8C079 837 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Rsad2Q8CBB9 362 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 GlyctkQ8QZY2 523 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Cbwd1Q8VEH6 393 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Hps3Q91VB4 1002 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 1700020D05RikQ99PB1 294 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Cst12Q9DAN8 128 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Eif4enif1Q9EST3 983 aaKnown RBP11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Gm6121L7MUF1 212 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Lnx1O70263 728 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Actn3O88990 900 aaKnown RBP11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Il7P10168 154 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Cct6aP80317 531 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 124.9 ms