RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Rbm15bQ6PHZ5 887 aaKnown RBP10.98□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Atad3Q925I1 591 aa10.98□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Clic4Q9QYB1 253 aa10.98□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Nfe2l3Q9WTM4 660 aa10.98□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Crb1Q8VHS2 1405 aa10.98□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Zscan18E9PUD6 809 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Lmnb2P21619 596 aaKnown RBP10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Fam178bQ24JP3 464 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Ccdc174Q3U155 467 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Stxbp3Q60770 592 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Rexo1Q7TT28 1213 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Riox2Q8CD15 465 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Kcnj14Q8JZN3 434 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Emilin1Q99K41 1017 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Tsnaxip1Q99P25 704 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 IqcdQ9D3V1 458 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Cbx6Q9DBY5 414 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Kcnq5Q9JK45 933 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Med23Q80YQ2 1367 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Fam228bQ497Q6 232 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Ccdc14Q8K2J4 934 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Nod2Q8K3Z0 1020 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Sh2b1Q91ZM2 756 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Serpinb12Q9D7P9 423 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Eef1gQ9D8N0 437 aaKnown RBP10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 MycbpQ9EQS3 103 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Kif23E9Q5G3 953 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Samd15F6XZJ7 620 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Zdhhc9P59268 364 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Fgd5Q80UZ0 1219 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 SowahdQ8BY98 327 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Arhgap24Q8C4V1 747 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Usp42B2RQC2 1324 aaKnown RBP10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Nucks1Q80XU3 234 aaKnown RBP10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Sptlc3Q8BG54 563 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Cnot10Q8BH15 744 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Anks1bQ8BIZ1 1259 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 HhatQ8BMT9 499 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Tut1Q8R3F9 869 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Ciapin1Q8WTY4 309 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Pcdha12Q91Y18 950 aa10.97□□□□□ -0.65
Ldlr-201ENSMUST00000034713 A0A1W2P6Q8 802 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Gm9048A0A1W2P7H4 802 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 A0A1W2P7Z8 802 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Gm9046A0A1W2P855 802 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Rapgef1Q3UHC1 1224 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Slc44a1Q6X893 653 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Ints8Q80V86 995 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Ankk1Q8BZ25 745 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 AdpgkQ8VDL4 496 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 StrbpQ91WM1 672 aaKnown RBP10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Cabp7Q91ZM8 215 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Ppp2r3dQ9Z176 491 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Cacna2d3Q9Z1L5 1091 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Arap3Q8R5G7 1538 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Tldc2A2ACG1 198 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Trove2O08848 538 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Zbtb7aO88939 569 aaKnown RBP10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Parp1P11103 1013 aaKnown RBP10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Ms4a2P20490 235 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Celf1P28659 486 aaKnown RBP10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Eef1dP57776 281 aaKnown RBP10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Eef2P58252 858 aaKnown RBP10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Fkbp3Q62446 224 aaKnown RBP10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Sf3b3Q921M3 1217 aaKnown RBP10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Copb1Q9JIF7 953 aa10.96□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Slc27a1Q60714 646 aa10.96□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Osbpl1aQ91XL9 950 aa10.96□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Vps33aQ9D2N9 598 aa10.96□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Mei1Q9D4I2 1268 aa10.96□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Cul9Q80TT8 1865 aa10.96□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Lcmt1A0A0U1RNF2 332 aa10.96□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Fermt1P59113 677 aa10.96□□□□□ -0.66
Ldlr-201ENSMUST00000034713 EnahQ03173 802 aa10.96□□□□□ -0.66
Ldlr-201ENSMUST00000034713 CtcfQ61164 736 aaKnown RBP10.96□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Tktl2Q9D4D4 627 aa10.96□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Add2Q9QYB8 725 aa10.96□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ifi207E9Q3L4 978 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ncf2O70145 525 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Kifap3P70188 793 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Gtpbp6Q3U6U5 514 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ppp1r7Q3UM45 361 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Mdh1bQ5F204 500 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Slc30a9Q5IRJ6 567 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 SkiQ60698 725 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Nxf7Q80SZ6 620 aaKnown RBP10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Armcx3Q8BHS6 379 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Gimap7Q8R379 293 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Mxra7Q9CZH7 178 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Cd3dP04235 173 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Mdh1P14152 334 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Anks6Q6GQX6 883 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Krt39Q6IFX4 482 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Zfp317Q8C0Q5 607 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Tbc1d23Q8K0F1 684 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Usp11Q99K46 921 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Azi2Q9QYP6 405 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Npy5rO70342 466 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 DSCC1Q14AI0 399 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Lamc2Q61092 1191 aa10.95□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms