RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Ift20Q61025 132 aa11.14□□□□□ -0.63
Copb1-201ENSMUST00000033012 Tbc1d5Q80XQ2 815 aa11.14□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ccdc28bQ8CEG5 200 aa11.14□□□□□ -0.63
Copb1-201ENSMUST00000033012 Mrps25Q9D125 171 aaKnown RBP11.14□□□□□ -0.63
Copb1-201ENSMUST00000033012 Pkd2l2Q9JLG4 621 aa11.14□□□□□ -0.63
Copb1-201ENSMUST00000033012 Itsn1Q9Z0R4 1714 aa11.14□□□□□ -0.63
Copb1-201ENSMUST00000033012 Camta1A2A891 1682 aa11.14□□□□□ -0.63
Copb1-201ENSMUST00000033012 Nck2O55033 380 aa11.14□□□□□ -0.63
Copb1-201ENSMUST00000033012 Atp2a2O55143 1044 aaKnown RBP11.14□□□□□ -0.63
Copb1-201ENSMUST00000033012 Dnm2P39054 870 aaKnown RBP11.14□□□□□ -0.63
Copb1-201ENSMUST00000033012 Fam207aP58468 219 aaKnown RBP11.14□□□□□ -0.63
Copb1-201ENSMUST00000033012 Pald1P70261 859 aa11.14□□□□□ -0.63
Copb1-201ENSMUST00000033012 Antxr2Q6DFX2 487 aa11.14□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ccdc182Q9D9C6 152 aa11.14□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ecm29Q6PDI5 1840 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ulk4Q3V129 1303 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Fbf1A2A870 1173 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ccdc170D3YXL0 722 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Gap43P06837 227 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Cxcr2P35343 359 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Gfpt1P47856 697 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Tbc1d2bQ3U0J8 965 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Trim37Q6PCX9 961 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 WhrnQ80VW5 918 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Rassf9Q8K342 435 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ccdc43Q9CR29 222 aaKnown RBP11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Q9D9H8 365 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Atp6v1g2Q9WTT4 118 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 GpiP06745 558 aaKnown RBP11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Il7P10168 154 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 VimP20152 466 aaKnown RBP11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Hspd1P63038 573 aaKnown RBP11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Slc51bQ80WK2 128 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Cnot10Q8BH15 744 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ttc26Q8BS45 554 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Znf24Q91VN1 368 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Txndc5Q91W90 417 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ubxn6Q99PL6 442 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Smco2Q9DA21 347 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Krt27Q9Z320 448 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Nwd2Q6P5U7 1742 aa11.13□□□□□ -0.63
Copb1-201ENSMUST00000033012 Apba1B2RUJ5 842 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Nr1i2O54915 431 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Tcp1P11983 556 aaKnown RBP11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 RpsaP14206 295 aaKnown RBP11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Krit1Q6S5J6 736 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Fermt3Q8K1B8 665 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Pus3Q9JI38 481 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Myh7Q91Z83 1935 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Gm28919A0A087WP35 240 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Gm21680A0A0G2JGR8 267 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 PurbO35295 324 aaKnown RBP11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Xrcc6P23475 608 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Cyp2d10P24456 504 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ercc5P35689 1170 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Agbl1Q09M05 972 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Lrrcc1Q69ZB0 1026 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Tekt3Q6X6Z7 490 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Anapc5Q8BTZ4 740 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Sept14Q9DA97 430 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ankrd2Q9WV06 328 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Plcb1Q9Z1B3 1216 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ahdc1Q6PAL7 1594 aaKnown RBP11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 CluhQ5SW19 1315 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Hspa9P38647 679 aaKnown RBP11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Adam6bQ6IMH7 756 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 NostrinQ6WKZ7 506 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Dnph1Q80VJ3 173 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Smndc1Q8BGT7 238 aaKnown RBP11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Cep128Q8BI22 1102 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 GlmnQ8BZM1 596 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Spata2Q8K004 515 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Mical1Q8VDP3 1048 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ankrd49Q8VE42 238 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Rmi1Q9D4G9 616 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Sh2b2Q9JID9 621 aa11.12□□□□□ -0.63
Copb1-201ENSMUST00000033012 Col20a1Q923P0 1320 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Gm3415J3QMS8 315 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ifnar1P33896 590 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Dnm1P39053 867 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Tmtc1Q3UV71 942 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Kctd16Q5DTY9 427 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Gpr139Q80UC8 345 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ano2Q8CFW1 1002 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Toe1Q9D2E2 511 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Sil1Q9EPK6 465 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 MefvQ9JJ26 767 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Flt4P35917 1363 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Gm1758F6VZZ1 202 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Zfp105G3X9I0 524 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ampd3O08739 766 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Tmod1P49813 359 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Hsd17b1P51656 344 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Pex1Q5BL07 1284 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 HellsQ60848 821 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Map3k2Q61083 619 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Jade2Q6ZQF7 829 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Ppfia2Q8BSS9 1257 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 RalylQ8BTF8 293 aa11.11□□□□□ -0.63
Copb1-201ENSMUST00000033012 Scfd2Q8BTY8 684 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms