RNA–Protein interactions for RNA: ENSMUST00000032962.10

Cln3-201, Transcript of Battenin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Cln3, Length 2,386 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-201ENSMUST00000032962 Bcs1lQ9CZP5 418 aa13.36□□□□□ -0.27
Cln3-201ENSMUST00000032962 Samsn1P57725 372 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 OsbpQ3B7Z2 805 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Akap4Q60662 849 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Scnn1aQ61180 699 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Zfp341Q6PGC9 846 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Lrrc24Q8BHA1 521 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Bola3Q8CEI1 110 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Frat2Q8K025 231 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Hps3Q91VB4 1002 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Gbp7Q91Z40 638 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Clic4Q9QYB1 253 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Celf2Q9Z0H4 508 aaKnown RBP13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Cfap99A0A140LIX9 648 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Pramel3A2AHA7 463 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Gm7903A2AWL1 463 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 AV320801A2AWL3 467 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Gm15023L7MUB4 467 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Nfil3O08750 462 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Dnajb6O54946 365 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Fez2Q6TYB5 348 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Ranbp6Q8BIV3 1105 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Dnm3Q8BZ98 863 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 C8aQ8K182 587 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Tdrd3Q91W18 743 aaKnown RBP13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Gtpbp4Q99ME9 634 aaKnown RBP13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Homer1Q9Z2Y3 366 aa13.35□□□□□ -0.27
Cln3-201ENSMUST00000032962 Cxcl9P18340 126 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Mybl2P48972 704 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Irx2P81066 474 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Otud5Q3U2S4 566 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Fbxo28Q8BIG4 368 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Fam53cQ8BXQ8 393 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Terf2ipQ91VL8 393 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Nop2Q922K7 793 aaKnown RBP13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Tmod2Q9JKK7 351 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 A0A1W2P6Q8 802 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Gm9048A0A1W2P7H4 802 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 A0A1W2P7Z8 802 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Gm9046A0A1W2P855 802 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Jakmip2D3YXK0 820 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Arhgef2Q60875 985 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Cep131Q62036 1060 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Tpcn2Q8BWC0 731 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Gpcpd1Q8C0L9 675 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Rbm28Q8CGC6 750 aaKnown RBP13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Slc18a1Q8R090 521 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Usp33Q8R5K2 909 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Stk38Q91VJ4 465 aa13.34□□□□□ -0.27
Cln3-201ENSMUST00000032962 Tspoap1Q7TNF8 1846 aa13.33□□□□□ -0.28
Cln3-201ENSMUST00000032962 Ccdc88aQ5SNZ0 1873 aa13.33□□□□□ -0.28
Cln3-201ENSMUST00000032962 Pappa2E9PZ87 1789 aa13.33□□□□□ -0.28
Cln3-201ENSMUST00000032962 Bin1O08539 588 aaKnown RBP13.33□□□□□ -0.28
Cln3-201ENSMUST00000032962 Kif2aP28740 705 aa13.33□□□□□ -0.28
Cln3-201ENSMUST00000032962 Bri3bpQ8BXV2 253 aa13.33□□□□□ -0.28
Cln3-201ENSMUST00000032962 Srek1Q8BZX4 494 aaKnown RBP13.33□□□□□ -0.28
Cln3-201ENSMUST00000032962 Spata32Q8C5V0 334 aa13.33□□□□□ -0.28
Cln3-201ENSMUST00000032962 Ttll1Q91V51 423 aa13.33□□□□□ -0.28
Cln3-201ENSMUST00000032962 Snapc2Q91XA5 359 aa13.33□□□□□ -0.28
Cln3-201ENSMUST00000032962 Ddx27Q921N6 760 aaKnown RBP13.33□□□□□ -0.28
Cln3-201ENSMUST00000032962 Aldh1b1Q9CZS1 519 aa13.33□□□□□ -0.28
Cln3-201ENSMUST00000032962 S1pr4Q9Z0L1 386 aa13.33□□□□□ -0.28
Cln3-201ENSMUST00000032962 Tulp1Q9Z273 543 aa13.33□□□□□ -0.28
Cln3-201ENSMUST00000032962 AfdnQ9QZQ1 1820 aaKnown RBP13.33□□□□□ -0.28
Cln3-201ENSMUST00000032962 Ccdc121E9Q6D3 323 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 Ppef1O35655 650 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 H2afxP27661 143 aaKnown RBP13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 Fbln1Q08879 705 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 Cdc37Q61081 379 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 TicrrQ8BQ33 1889 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 Gimap7Q8R379 293 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 Serpinb6bO08804 377 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 CtshP49935 333 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 Oxr1Q4KMM3 866 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 Haus6Q6NV99 933 aaKnown RBP13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 Spag5Q7TME2 1165 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 U2af1l4Q8BGJ9 220 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 Triml1Q8BVP1 470 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 Onecut3Q8K557 490 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 Vmn1r199Q8R280 367 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 SdsQ8VBT2 327 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 SynrgQ5SV85 1306 aa13.32□□□□□ -0.28
Cln3-201ENSMUST00000032962 Zfp597E9Q6S0 419 aa13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Eps15P42567 897 aa13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Kcnj4P52189 445 aa13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Sptlc2P97363 560 aaKnown RBP13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 MycbpapQ5SUV2 932 aa13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Ddx55Q6ZPL9 600 aaKnown RBP13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Mei4Q8BRM6 389 aa13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Zfp202Q8C879 641 aa13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Gm43638A0A0J9YU36 694 aa13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Zmynd8A2A484 1235 aaKnown RBP13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Eif5P59325 429 aaKnown RBP13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Yy1Q00899 414 aa13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Tfcp2l1Q3UNW5 479 aa13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Slc9c1Q6UJY2 1175 aa13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Yeats4Q9CR11 227 aaKnown RBP13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Tfap4Q9JIZ5 338 aa13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Stxbp4Q9WV89 557 aa13.31□□□□□ -0.28
Cln3-201ENSMUST00000032962 Kcna1P16388 495 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms