RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Sap30bpQ02614 308 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Ptpn18Q61152 453 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Haus6Q6NV99 933 aaKnown RBP9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Usp50Q6P8X6 390 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Krt84Q99M73 603 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Arhgef25Q9CWR0 618 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Pidd1Q9ERV7 915 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Usp42B2RQC2 1324 aaKnown RBP9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Cyp3a59D3Z2W7 503 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Rnf216P58283 853 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Miga1Q4QQM5 600 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Kctd1Q5M956 257 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Spata7Q80VP2 582 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Ubxn10Q8BG34 277 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Plcg2Q8CIH5 1265 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Top1mtQ8R4U6 593 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Atp5c1Q91VR2 298 aaKnown RBP9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Zbtb43Q9DAI4 467 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Ddit3P35639 168 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Kif20aP97329 887 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 NfiaQ02780 532 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Gpatch11Q3UFS4 262 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Myo19Q5SV80 963 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Iws1Q8C1D8 766 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Usp44Q8C2S0 711 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Cog6Q8R3I3 657 aa9.33□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Btnl4A2CG29 586 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 OatP29758 439 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Map4k1P70218 827 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Babam1Q3UI43 333 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Pqbp1Q91VJ5 263 aaKnown RBP9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Sil1Q9EPK6 465 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 1700006A11RikB9EHI3 544 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 NfkbieO54910 364 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Slc6a20bO88575 635 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Chrm1P12657 460 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Nkx1-2P42580 305 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Pla2g6P97819 807 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Usp17leQ7M764 540 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Tcp11l1Q8BTG3 509 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Lrrc56Q8K375 552 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 RnpepQ8VCT3 650 aaKnown RBP9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Ankrd54Q91WK7 299 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 4921524L21RikQ9D5T2 438 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Mad2l2Q9D752 211 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Capn10Q9ESK3 666 aa9.32□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Ttc6G3UYY4 1857 aa9.31□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Samd11Q1RNF8 542 aa9.31□□□□□ -0.92
Ssr3-201ENSMUST00000029414 B4galnt3Q6L8S8 986 aa9.31□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Slc44a1Q6X893 653 aa9.31□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Zhx2Q8C0C0 836 aaKnown RBP9.31□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Ccdc178Q8CDV0 866 aa9.31□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Slc4a8Q8JZR6 1089 aa9.31□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Gm15448F6PZL4 682 aa9.31□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Map7O88735 730 aa9.31□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Ddx4Q61496 702 aa9.31□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Gigyf2Q6Y7W8 1291 aaKnown RBP9.31□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Ttc7aQ8BGB2 858 aa9.31□□□□□ -0.92
Ssr3-201ENSMUST00000029414 CenppQ9CZ92 286 aa9.31□□□□□ -0.92
Ssr3-201ENSMUST00000029414 KnstrnQ9D9Z1 312 aaKnown RBP9.31□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Lipo1J3QME6 396 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Scg2Q03517 617 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Pus7lQ8CE46 702 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Rassf8Q8CJ96 419 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Taco1Q8K0Z7 294 aaKnown RBP9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Pcdhb22Q91XZ8 794 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Clstn1Q9EPL2 979 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 ArcQ9WV31 396 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Wdr81Q5ND34 1934 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Prr16A3KMN5 304 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Ugt1a5B2RT14 529 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Il13ra2O88786 383 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Myl3P09542 204 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Pdia3P27773 505 aaKnown RBP9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 PtpreP49446 699 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Tnnt2P50752 301 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Pou2f2Q00196 463 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 HmgcrQ01237 887 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Vmn1r209Q5NC97 312 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Ccdc85aQ5SP85 500 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Ifit2Q64112 472 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 MslnlQ8C160 685 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Lonrf3Q9D4H7 753 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Chmp4cQ9D7F7 232 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Cspp1B2RX88 1205 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Stx8O88983 236 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Stim2P83093 746 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Sec23aQ01405 765 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Nom1Q3UFM5 854 aaKnown RBP9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Ttbk2Q3UVR3 1243 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 LrmpQ60664 539 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 PhkbQ7TSH2 1085 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Zdhhc15Q8BGJ0 337 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Hsdl1Q8BTX9 330 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Ak2Q9WTP6 239 aa9.3□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Obsl1D3YYU8 1804 aaKnown RBP9.29□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Rbm8a2A0A0N4SUH6 174 aa9.29□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Cst8P32766 142 aa9.29□□□□□ -0.92
Ssr3-201ENSMUST00000029414 Cep126Q0VBV7 1103 aa9.29□□□□□ -0.92
Ssr3-201ENSMUST00000029414 RubcnlQ3TD16 648 aa9.29□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms