RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Hdgfl1Q2VPR5 283 aa9.47□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Ctage5Q8R311 779 aa9.47□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Krt34Q9D646 392 aa9.47□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Nfxl1E9Q8I7 918 aaKnown RBP9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Parp1P11103 1013 aaKnown RBP9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Zfp781Q0P5U5 243 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Bst2Q8R2Q8 172 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Ccdc89Q9DA73 370 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Tmem191cQ9JJB1 302 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Epb41l3Q9WV92 929 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 FosP01101 380 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Alppl2P24823 529 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Rpl13P47963 211 aaKnown RBP9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Sap30bpQ02614 308 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Fmnl3Q6ZPF4 1028 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Arid5bQ8BM75 1188 aaKnown RBP9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Sh3bp5lQ99LH9 392 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Sept14Q9DA97 430 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Tob2Q9JM55 345 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Sox5P35710 763 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Gcnt1Q09324 428 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Plcg2Q8CIH5 1265 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Lrit1Q8K099 624 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Sirt2Q8VDQ8 389 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Erlin1Q91X78 346 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 ChmQ9QXG2 665 aa9.46□□□□□ -0.89
Sf3b1-201ENSMUST00000027127 Vmn2r71L7N2D8 855 aa9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Nxf2Q4ZGD8 691 aa9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Nsrp1Q5NCR9 542 aa9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Cc2d1bQ8BRN9 848 aa9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ccdc113Q8C5T8 377 aa9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ndufb9Q9CQJ8 179 aa9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Serpinb12Q9D7P9 423 aa9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 SmapQ9R0P4 181 aaKnown RBP9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ulk4Q3V129 1303 aa9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Serpina16D3Z660 418 aa9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Gm3893E9Q1I1 302 aa9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ftl1P29391 183 aa9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Top1Q04750 767 aaKnown RBP9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Plekha7Q3UIL6 1118 aaKnown RBP9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Pnma5Q5DTT8 618 aa9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Glra4Q61603 456 aa9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Atxn2lQ7TQH0 1049 aaKnown RBP9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Mei4Q8BRM6 389 aa9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Eef1gQ9D8N0 437 aaKnown RBP9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Mtmr2Q9Z2D1 643 aa9.46□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Olfr247E9PVJ7 320 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Olfr819K7N727 320 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Rad23aP54726 363 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 PodnQ7TQ62 611 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Mettl5Q8K1A0 209 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Abcb6Q9DC29 842 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ifi207E9Q3L4 978 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Serpinc1P32261 465 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Cdh15P33146 784 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Kcnb1Q03717 857 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ccdc51Q3URS9 406 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Fam161bQ8CB59 589 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ndufv1Q91YT0 464 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Cfap53Q9D439 514 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Grem2O88273 168 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Mcm6P97311 821 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Rpusd2Q149F1 553 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Nom1Q3UFM5 854 aaKnown RBP9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Prkag3Q8BGM7 489 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Psmd2Q8VDM4 908 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Q91WD4 421 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Tgs1Q923W1 853 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 NenfQ9CQ45 171 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 EhhadhQ9DBM2 718 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Tmod2Q9JKK7 351 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Tjp1P39447 1745 aaKnown RBP9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ric8aQ3TIR3 530 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Heg1E9Q7X6 1337 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 4930523C07RikE9Q2T4 99 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Mum1l1Q4VA55 681 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Pip5kl1Q6U7H8 395 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Snd1Q78PY7 910 aaKnown RBP9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Naa15Q80UM3 865 aaKnown RBP9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Hook3Q8BUK6 718 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Hgh1Q8C3I8 393 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Smc1bQ920F6 1248 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ubxn8Q9QZ49 277 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Atp1a4Q9WV27 1032 aa9.45□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Nbr1P97432 988 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Skap1Q3UUV5 355 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ctdp1Q7TSG2 960 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 CenphQ9QYM8 241 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Pcdha4O88689 947 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Nr5a1P33242 462 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Samsn1P57725 372 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ccdc38Q8CDN8 563 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Mfap3lQ9D3X9 409 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Mad2l2Q9D752 211 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Plcb1Q9Z1B3 1216 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Serpinb6bO08804 377 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Pla2g4bP0C871 782 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Vars2Q3U2A8 1060 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Nt5c2Q3V1L4 560 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Oxr1Q4KMM3 866 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms