RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Krt39Q6IFX4 482 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Fbxo11Q7TPD1 930 aaKnown RBP13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Slc35g1Q8BY79 368 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Tbx22Q8K402 517 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Telo2Q9DC40 840 aaKnown RBP13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Gpaa1Q9WTK3 621 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Klhl34A2AI76 644 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 InhbeO08717 350 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Pcdha4O88689 947 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Map3k7clP58500 142 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 1700013D24RikQ0P521 120 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Rnf40Q3U319 1001 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 MaeaQ4VC33 396 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 AsnsQ61024 561 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Cacna2d2Q6PHS9 1154 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Ctdspl2Q8BG15 465 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Hps6Q8BLY7 805 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Stk39Q9Z1W9 556 aa13.54□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Taf4E9QAP7 1042 aaKnown RBP13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Gna14P30677 355 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Ddx17Q501J6 650 aaKnown RBP13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Gpcpd1Q8C0L9 675 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Kcnv2Q8CFS6 562 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Plcg2Q8CIH5 1265 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 NkapQ9D0F4 415 aaKnown RBP13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 AdkP55264 361 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Pla2g4eQ50L42 875 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Dpp8Q80YA7 892 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Anks1bQ8BIZ1 1259 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Efcab8Q8C9R9 203 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Zcchc8Q9CYA6 709 aaKnown RBP13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Fam217aQ9D9W6 419 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 ZfxP17012 799 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Gna15P30678 374 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Fdx1P46656 188 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 LrmpQ60664 539 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Zbtb7bQ64321 544 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 RgmbQ7TQ33 436 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Dph5Q9CWQ0 281 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Med10Q9CXU0 135 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Cdk12Q14AX6 1484 aaKnown RBP13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Tex13cD3YU32 604 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Gm6583E9Q8Z1 469 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Enc1O35709 589 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Sh3bp1P55194 680 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Ankrd23Q812A3 306 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Cbwd1Q8VEH6 393 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Nrbp1Q99J45 535 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Add3Q9QYB5 706 aaKnown RBP13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Znf521Q6KAS7 1311 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Rnf17Q99MV7 1640 aa13.53□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Surf1P09925 306 aa13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Oxsr1Q6P9R2 527 aa13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Pank4Q80YV4 820 aa13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Prpf3Q922U1 683 aaKnown RBP13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Tmem191cQ9JJB1 302 aa13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 GsdmeQ9Z2D3 512 aa13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Ercc5P35689 1170 aa13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Traf5P70191 558 aa13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Surf6P70279 355 aaKnown RBP13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Ccdc110Q3V125 848 aa13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Ovgp1Q62010 721 aa13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Vps52Q8C754 723 aaKnown RBP13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Appl2Q8K3G9 662 aa13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Kctd10Q922M3 315 aa13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Abcb6Q9DC29 842 aa13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Frmpd4A2AFR3 1320 aa13.52□□□□□ -0.24
Ldb3-201ENSMUST00000022327 Hecw1Q8K4P8 1604 aa13.52□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Rnaseh1O70338 285 aa13.52□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Psmc4P54775 418 aa13.52□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ddx49Q4FZF3 480 aaKnown RBP13.52□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Sval3Q76I99 144 aa13.52□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Bbs9Q811G0 885 aa13.52□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Add2Q9QYB8 725 aa13.52□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Parp2O88554 559 aa13.52□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Pde6aP27664 859 aa13.52□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Cd22P35329 862 aa13.52□□□□□ -0.25
Ldb3-201ENSMUST00000022327 NeblQ0II04 452 aa13.52□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Skap1Q3UUV5 355 aa13.52□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Tpd52l2Q9CYZ2 220 aaKnown RBP13.52□□□□□ -0.25
Ldb3-201ENSMUST00000022327 SyncQ9EPM5 470 aa13.52□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Mroh6V9GX81 722 aa13.52□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Heatr4E9Q357 955 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Tom1l2Q5SRX1 507 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ttll4Q80UG8 1193 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Bola2Q8BGS2 86 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Rcor2Q8C796 523 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Gtpbp10Q8K013 366 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Slc18a1Q8R090 521 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Tnni3P48787 211 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 DeptorQ570Y9 409 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 RbsnQ80Y56 783 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Spata4Q8K3V1 295 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Tfap4Q9JIZ5 338 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Pus7B7ZNL8 666 aaKnown RBP13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Mroh8E9PYI4 1049 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Sept2P42208 361 aaKnown RBP13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 GabpaQ00422 454 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Panx2Q6IMP4 677 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Tekt2Q922G7 430 aa13.51□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms