RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 MeiocA2AG06 965 aa18.18■□□□□ 0.5
Trim28-201ENSMUST00000005705 Kifc2O08672 792 aa18.18■□□□□ 0.5
Trim28-201ENSMUST00000005705 ErmnQ5EBJ4 281 aa18.18■□□□□ 0.5
Trim28-201ENSMUST00000005705 Igbp1Q61249 340 aa18.18■□□□□ 0.5
Trim28-201ENSMUST00000005705 Fhod1Q6P9Q4 1197 aa18.18■□□□□ 0.5
Trim28-201ENSMUST00000005705 Lrrc41Q8K1C9 807 aa18.18■□□□□ 0.5
Trim28-201ENSMUST00000005705 Stag1Q9D3E6 1258 aa18.18■□□□□ 0.5
Trim28-201ENSMUST00000005705 Irx5Q9JKQ4 484 aa18.18■□□□□ 0.5
Trim28-201ENSMUST00000005705 Arap2Q8BZ05 1703 aa18.18■□□□□ 0.5
Trim28-201ENSMUST00000005705 Ddx23D3Z0M9 819 aaKnown RBP18.18■□□□□ 0.5
Trim28-201ENSMUST00000005705 Tuft1O08970 390 aa18.18■□□□□ 0.5
Trim28-201ENSMUST00000005705 Usp5P56399 858 aaKnown RBP18.18■□□□□ 0.5
Trim28-201ENSMUST00000005705 Ube2q2Q8K2Z8 378 aa18.18■□□□□ 0.5
Trim28-201ENSMUST00000005705 LpxnQ99N69 386 aa18.18■□□□□ 0.5
Trim28-201ENSMUST00000005705 Pola2P33611 600 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Tcp11Q01755 566 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Hdgfl1Q2VPR5 283 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Jade2Q6ZQF7 829 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Tas2r124Q7M718 309 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Slc4a8Q8JZR6 1089 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Tmem60Q8K174 133 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Ankrd31A0A140LI88 1765 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Frmd7A2AD83 703 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Gm4307E9PZY4 289 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Gm4312K9J7E2 289 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Top1Q04750 767 aaKnown RBP18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Rasal3Q8C2K5 1041 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Krt222Q8CCX5 294 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Cd274Q9EP73 290 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Lrp6O88572 1613 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Ap1g2O88512 791 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Bap1Q99PU7 728 aa18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Sf3a3Q9D554 501 aaKnown RBP18.17■□□□□ 0.5
Trim28-201ENSMUST00000005705 Cyp26c1B2RXA7 518 aa18.16■□□□□ 0.5
Trim28-201ENSMUST00000005705 Epb41l2O70318 988 aaKnown RBP18.16■□□□□ 0.5
Trim28-201ENSMUST00000005705 Rnf40Q3U319 1001 aa18.16■□□□□ 0.5
Trim28-201ENSMUST00000005705 Zbtb39Q6PDK0 712 aa18.16■□□□□ 0.5
Trim28-201ENSMUST00000005705 Epn1Q80VP1 575 aa18.16■□□□□ 0.5
Trim28-201ENSMUST00000005705 Sash3Q8K352 380 aa18.16■□□□□ 0.5
Trim28-201ENSMUST00000005705 Asic2Q925H0 512 aa18.16■□□□□ 0.5
Trim28-201ENSMUST00000005705 Card14Q99KF0 999 aa18.16■□□□□ 0.5
Trim28-201ENSMUST00000005705 Scgb2b18A0A087WPA9 112 aa18.16■□□□□ 0.5
Trim28-201ENSMUST00000005705 Sec23aQ01405 765 aa18.16■□□□□ 0.5
Trim28-201ENSMUST00000005705 Mettl5Q8K1A0 209 aa18.16■□□□□ 0.5
Trim28-201ENSMUST00000005705 Myo1hQ9D6A1 958 aa18.16■□□□□ 0.5
Trim28-201ENSMUST00000005705 PappaQ8R4K8 1624 aa18.16■□□□□ 0.5
Trim28-201ENSMUST00000005705 Spocd1B1ASB6 936 aa18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 DlatQ8BMF4 642 aa18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Gm13023A2A8N2 498 aa18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Rexo5D3YW29 759 aa18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 NfixP70257 488 aa18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Snai1Q02085 264 aa18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 KhsrpQ3U0V1 748 aaKnown RBP18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Pm20d1Q8C165 503 aa18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Syf2Q9D198 242 aaKnown RBP18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Saal1Q9D2C2 474 aa18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Cul4bA2A432 970 aaKnown RBP18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Greb1lB9EJV3 1913 aa18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Api5O35841 504 aaKnown RBP18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Ppp1r7Q3UM45 361 aa18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 HrQ61645 1182 aa18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Gpbp1Q6NXH3 473 aaKnown RBP18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Tmem39aQ9CYC3 486 aa18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Copb1Q9JIF7 953 aa18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Lmbr1Q9JIT0 490 aa18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Clip2Q9Z0H8 1047 aa18.15■□□□□ 0.5
Trim28-201ENSMUST00000005705 Pla2g4aP47713 748 aa18.14■□□□□ 0.49
Trim28-201ENSMUST00000005705 Asic1Q6NXK8 526 aa18.14■□□□□ 0.49
Trim28-201ENSMUST00000005705 Cdca7Q9D0M2 382 aa18.14■□□□□ 0.49
Trim28-201ENSMUST00000005705 CenphQ9QYM8 241 aa18.14■□□□□ 0.49
Trim28-201ENSMUST00000005705 Cnbd1B1AWM0 430 aa18.14■□□□□ 0.49
Trim28-201ENSMUST00000005705 Foxn2E9Q7L6 429 aa18.14■□□□□ 0.49
Trim28-201ENSMUST00000005705 Tmem132bF7BAB2 1078 aa18.14■□□□□ 0.49
Trim28-201ENSMUST00000005705 Pak1O88643 545 aa18.14■□□□□ 0.49
Trim28-201ENSMUST00000005705 Tpp1O89023 562 aa18.14■□□□□ 0.49
Trim28-201ENSMUST00000005705 Mcm7Q61881 719 aaKnown RBP18.14■□□□□ 0.49
Trim28-201ENSMUST00000005705 Slc20a2Q80UP8 656 aa18.14■□□□□ 0.49
Trim28-201ENSMUST00000005705 Sh3bp5lQ99LH9 392 aa18.14■□□□□ 0.49
Trim28-201ENSMUST00000005705 Ccdc24E9PUW8 296 aa18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Dnajc21E9Q8D0 531 aa18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Hps5P59438 1126 aa18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Rbm26Q6NZN0 1012 aaKnown RBP18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Gimap8Q75N62 688 aa18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Sde2Q8K1J5 448 aaKnown RBP18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Ccdc83Q9D4V3 305 aa18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Itga2bQ9QUM0 1033 aa18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Nr2e3Q9QXZ7 395 aa18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Uso1Q9Z1Z0 959 aaKnown RBP18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Ftl1P29391 183 aa18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Rps8P62242 208 aaKnown RBP18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Dok7Q18PE0 504 aa18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Ttll4Q80UG8 1193 aa18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Dbndd2Q9CRD4 158 aa18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 NesQ6P5H2 1864 aaKnown RBP18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Gm7356A0A087WSA6 508 aa18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 4932429P05RikA2ADI4 785 aa18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Snap25P60879 206 aa18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Nlrp2Q4PLS0 1046 aaKnown RBP18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Slc9a1Q61165 820 aa18.13■□□□□ 0.49
Trim28-201ENSMUST00000005705 Hexim1Q8R409 356 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms