RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Lrrfip1Q3UZ39 729 aaKnown RBP13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Nop9Q8BMC4 636 aaKnown RBP13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Spata16Q8C636 571 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Stap2Q8R0L1 411 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Apol7aB2RT54 418 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Stim2P83093 746 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Meis3P97368 378 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Tbc1d2bQ3U0J8 965 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Ccdc148Q6P5U8 527 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Krit1Q6S5J6 736 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Jade2Q6ZQF7 829 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Ccdc38Q8CDN8 563 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Ttc14Q9CSP9 761 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Lonrf3Q9D4H7 753 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Dnajc7Q9QYI3 494 aa13.45□□□□□ -0.26
Rfx1-201ENSMUST00000005600 AfdnQ9QZQ1 1820 aaKnown RBP13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Nmt2O70311 529 aa13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Nr5a1P33242 462 aa13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Kiaa1211Q5PR69 1207 aa13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Gngt1Q61012 74 aa13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Tnrc6cQ3UHC0 1690 aaKnown RBP13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Gm5134E9QAB5 671 aa13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Pla2g4aP47713 748 aa13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Ssrp1Q08943 708 aaKnown RBP13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Asic1Q6NXK8 526 aa13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Q91WD4 421 aa13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 EpgnQ924X1 152 aa13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Pkd2l2Q9JLG4 621 aa13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Parp1P11103 1013 aaKnown RBP13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Pde1cQ64338 706 aa13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 D130040H23RikQ8BII3 405 aa13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Vmn1r218Q8R261 298 aa13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 HdlbpQ8VDJ3 1268 aaKnown RBP13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Osbpl1aQ91XL9 950 aa13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Ssc5dQ8BV57 1371 aa13.44□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Krt78E9Q0F0 1068 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Zfpm1O35615 995 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Zfp781Q0P5U5 243 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Hirip3Q8BLH7 601 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 DlatQ8BMF4 642 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Tmem134Q8R0J4 195 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 CpvlQ9D3S9 478 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Cdhr2E9Q7P9 1308 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Pfkfb3A7UAK5 555 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Akr1c19G3X9Y6 323 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Tuft1O08970 390 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Klra1P20937 262 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 GscQ02591 256 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 HrQ61645 1182 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Papd7Q6PB75 542 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Setdb2Q8C267 713 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Trp53inp1Q9QXE4 239 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Sel1lQ9Z2G6 790 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Znf609Q8BZ47 1413 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 4931408C20RikE9PWP9 1381 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Scgb2b11A0A087WR49 112 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Ddx23D3Z0M9 819 aaKnown RBP13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Mapkapk5O54992 473 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Nap1l2P51860 460 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 IntuQ059U7 942 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Ccdc157Q5SPX1 718 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Bap1Q99PU7 728 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Efhd1Q9D4J1 240 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Pex3Q9QXY9 372 aa13.43□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Gm28919A0A087WP35 240 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Arhgap6O54834 987 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Mars2Q499X9 586 aaKnown RBP13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Sycp1Q62209 993 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Sept9Q80UG5 583 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Slx1bQ8BX32 270 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Gm1993A6X8I0 212 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 SlxD3Z347 212 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Gm4307E9PZY4 289 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Gm4312K9J7E2 289 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Erich4Q3UNU4 136 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Znf496Q5SXI5 585 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Krt40Q6IFX3 439 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Fam177a1Q8BR63 207 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Slc13a4Q8BZ82 625 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Usp27Q8CEG8 438 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Atp1a1Q8VDN2 1023 aaKnown RBP13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Mtfr1lQ9CWE0 289 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Popdc2Q9ES82 367 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Herc3A6H6S0 1050 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Rbm15bQ6PHZ5 887 aaKnown RBP13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Tekt3Q6X6Z7 490 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Spats2Q8K1N4 545 aaKnown RBP13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Psma7Q9Z2U0 248 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Slc9a1Q61165 820 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Ube2q2Q8K2Z8 378 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Ushbp1Q8R370 680 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Six6os1Q9CTN5 574 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Mss51Q9D5Z5 446 aa13.42□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Gfpt1P47856 697 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Cep95Q8BVV7 827 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Tldc1Q8K0P3 455 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Eif3cQ8R1B4 911 aaKnown RBP13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Arap2Q8BZ05 1703 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Nr1i2O54915 431 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Hmgb1P63158 215 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms