RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Cep131Q62036 1060 aa18.47■□□□□ 0.55
Shh-201ENSMUST00000002708 Recql4Q75NR7 1216 aaKnown RBP18.47■□□□□ 0.55
Shh-201ENSMUST00000002708 NelfbQ8C4Y3 580 aa18.47■□□□□ 0.55
Shh-201ENSMUST00000002708 Sh2b1Q91ZM2 756 aa18.47■□□□□ 0.55
Shh-201ENSMUST00000002708 RtcbQ99LF4 505 aaKnown RBP18.47■□□□□ 0.55
Shh-201ENSMUST00000002708 Copb1Q9JIF7 953 aa18.47■□□□□ 0.55
Shh-201ENSMUST00000002708 Sorbs3Q9R1Z8 733 aa18.47■□□□□ 0.55
Shh-201ENSMUST00000002708 Zfyve9A2A8R0 1397 aa18.47■□□□□ 0.55
Shh-201ENSMUST00000002708 Enc1O35709 589 aa18.47■□□□□ 0.55
Shh-201ENSMUST00000002708 Pramel6Q810Y9 485 aa18.47■□□□□ 0.55
Shh-201ENSMUST00000002708 Fam161bQ8CB59 589 aa18.47■□□□□ 0.55
Shh-201ENSMUST00000002708 Tmem60Q8K174 133 aa18.47■□□□□ 0.55
Shh-201ENSMUST00000002708 E2f4Q8R0K9 410 aa18.47■□□□□ 0.55
Shh-201ENSMUST00000002708 Cfap45Q9D9U9 551 aa18.47■□□□□ 0.55
Shh-201ENSMUST00000002708 Kif13bA0A286YCV9 1847 aa18.47■□□□□ 0.55
Shh-201ENSMUST00000002708 Gm5134E9QAB5 671 aa18.46■□□□□ 0.55
Shh-201ENSMUST00000002708 Scgb2b19J3QM75 112 aa18.46■□□□□ 0.55
Shh-201ENSMUST00000002708 Kif3cO35066 796 aa18.46■□□□□ 0.55
Shh-201ENSMUST00000002708 Cct6aP80317 531 aaKnown RBP18.46■□□□□ 0.55
Shh-201ENSMUST00000002708 MmeQ61391 750 aa18.46■□□□□ 0.55
Shh-201ENSMUST00000002708 Nek5Q7TSC3 627 aa18.46■□□□□ 0.55
Shh-201ENSMUST00000002708 Cyp4f39Q8BGU0 532 aa18.46■□□□□ 0.55
Shh-201ENSMUST00000002708 NapgQ9CWZ7 312 aa18.46■□□□□ 0.55
Shh-201ENSMUST00000002708 Gm11983V9GXS8 105 aa18.46■□□□□ 0.55
Shh-201ENSMUST00000002708 LrmpQ60664 539 aa18.46■□□□□ 0.55
Shh-201ENSMUST00000002708 LpxnQ99N69 386 aa18.46■□□□□ 0.55
Shh-201ENSMUST00000002708 Ulk4Q3V129 1303 aa18.46■□□□□ 0.55
Shh-201ENSMUST00000002708 Ppfibp2O35711 882 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Esyt2Q3TZZ7 845 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Ccdc14Q8K2J4 934 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Slc5a4bQ91ZP4 660 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Brms1Q99N20 246 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Gm4307E9PZY4 289 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Gm3893E9Q1I1 302 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Gm4312K9J7E2 289 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 GpiP06745 558 aaKnown RBP18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Abcd1P48410 736 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Hdac4Q6NZM9 1076 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Ccdc93Q7TQK5 629 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 MtrrQ8C1A3 696 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Syf2Q9D198 242 aaKnown RBP18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Ubxn8Q9QZ49 277 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Ano3A2AHL1 981 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Apol7aB2RT54 418 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Nck2O55033 380 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Ccdc51Q3URS9 406 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Cnga2Q62398 664 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Fhod1Q6P9Q4 1197 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Scrn1Q9CZC8 414 aa18.45■□□□□ 0.54
Shh-201ENSMUST00000002708 Nfil3O08750 462 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 Pak1O88643 545 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 Spg7Q3ULF4 781 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 Cep112Q5PR68 954 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 Myo19Q5SV80 963 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 HrQ61645 1182 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 Madcam1Q61826 405 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 Epn1Q80VP1 575 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 Ccdc73Q8CDM4 1066 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 Mad2l2Q9D752 211 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 Znf609Q8BZ47 1413 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 Foxn2E9Q7L6 429 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 MthfslL7N466 203 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 Emc10Q3TAS6 258 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 Slc9a1Q61165 820 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 Q8C5C9 218 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 Dydc2Q9D3X8 139 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 Heg1E9Q7X6 1337 aa18.44■□□□□ 0.54
Shh-201ENSMUST00000002708 MeiocA2AG06 965 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Nr5a1P33242 462 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Tcp11Q01755 566 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Rpusd2Q149F1 553 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Cfap100Q80VN0 613 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Kctd3Q8BFX3 815 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Snapc4Q8BP86 1333 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Kif23E9Q5G3 953 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Ranbp1P34022 203 aaKnown RBP18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Scg2Q03517 617 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Igbp1Q61249 340 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Tacc1Q6Y685 774 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Tmem179Q8BHH9 233 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Phldb2Q8K1N2 1249 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Card14Q99KF0 999 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Uchl5Q9WUP7 329 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Sh3tc1G3X9F6 1346 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Zmym2Q9CU65 1376 aa18.43■□□□□ 0.54
Shh-201ENSMUST00000002708 Rc3h1Q4VGL6 1130 aaKnown RBP18.42■□□□□ 0.54
Shh-201ENSMUST00000002708 Atxn2lQ7TQH0 1049 aaKnown RBP18.42■□□□□ 0.54
Shh-201ENSMUST00000002708 Cd2apQ9JLQ0 637 aa18.42■□□□□ 0.54
Shh-201ENSMUST00000002708 Clip2Q9Z0H8 1047 aa18.42■□□□□ 0.54
Shh-201ENSMUST00000002708 Znf667Q2TL60 609 aa18.42■□□□□ 0.54
Shh-201ENSMUST00000002708 Lrit1Q8K099 624 aa18.42■□□□□ 0.54
Shh-201ENSMUST00000002708 Dbndd2Q9CRD4 158 aa18.42■□□□□ 0.54
Shh-201ENSMUST00000002708 Uso1Q9Z1Z0 959 aaKnown RBP18.42■□□□□ 0.54
Shh-201ENSMUST00000002708 PpardP35396 440 aa18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Usp5P56399 858 aaKnown RBP18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Trappc10Q3TLI0 1259 aa18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Ica1lQ3TY65 431 aa18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Eif3j1Q3UGC7 261 aaKnown RBP18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Armc2Q3URY6 854 aa18.41■□□□□ 0.54
Shh-201ENSMUST00000002708 Eif3j2Q66JS6 263 aa18.41■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms