RNA–Protein interactions for RNA: YPL246C

RBD2, Transcript of Possible rhomboid protease, yeast

Gene RBD2, Length 789 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RBD2	YPL246C	RIM4	P38741	713 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	LYS9	P38999	446 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	SSP120	P39931	234 aa	Known RBP	5.76	□□□□□ -1.49
RBD2	YPL246C	SPF1	P39986	1215 aa	Known RBP	5.76	□□□□□ -1.49
RBD2	YPL246C	DSE1	P40077	573 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	MAM33	P40513	266 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	MND2	P40577	368 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	ERR3	P42222	437 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	FAR3	P46671	204 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	STB4	P50104	949 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	MIG2	P53035	382 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	TAN1	P53072	289 aa	Predicted RBP	5.76	□□□□□ -1.49
RBD2	YPL246C	MCM6	P53091	1017 aa	Known RBP	5.76	□□□□□ -1.49
RBD2	YPL246C	COS6	P53344	381 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	ALG11	P53954	548 aa	Known RBP	5.76	□□□□□ -1.49
RBD2	YPL246C	SPO19	Q03029	223 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	HFD1	Q04458	532 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	FAR10	Q06001	478 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	ADY3	Q07732	790 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	YPR202W	Q08993	238 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	SVS1	Q12254	260 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	CTF3	Q12748	733 aa		5.76	□□□□□ -1.49
RBD2	YPL246C	STE2	D6VTK4	431 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	GPA2	P10823	449 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	ADE2	P21264	571 aa	Known RBP	5.75	□□□□□ -1.49
RBD2	YPL246C	SAN1	P22470	610 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	DPH5	P32469	300 aa	Predicted RBP	5.75	□□□□□ -1.49
RBD2	YPL246C	GDA1	P32621	518 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	RGT1	P32862	1170 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	MRP8	P35719	219 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	CTP1	P38152	299 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	PPE1	P38796	400 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	AIM18	P38884	321 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	MBP1	P39678	833 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	GVP36	P40531	326 aa	Known RBP	5.75	□□□□□ -1.49
RBD2	YPL246C	RFX1	P48743	811 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	MRM2	P53123	320 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	YGR127W	P53275	312 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	BUD32	P53323	261 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	MUB1	Q03162	620 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	YKU80	Q04437	629 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	ENT4	Q07872	247 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	YDL177C	Q12257	170 aa		5.75	□□□□□ -1.49
RBD2	YPL246C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
RBD2	YPL246C	PRP6	P19735	899 aa	Predicted RBP	5.74	□□□□□ -1.49
RBD2	YPL246C	VPS34	P22543	875 aa		5.74	□□□□□ -1.49
RBD2	YPL246C	HEM12	P32347	362 aa	Predicted RBP	5.74	□□□□□ -1.49
RBD2	YPL246C	STL1	P39932	569 aa		5.74	□□□□□ -1.49
RBD2	YPL246C	YAT2	P40017	923 aa		5.74	□□□□□ -1.49
RBD2	YPL246C	ATM1	P40416	690 aa		5.74	□□□□□ -1.49
RBD2	YPL246C	PFD1	P46988	109 aa		5.74	□□□□□ -1.49
RBD2	YPL246C	ASN2	P49090	572 aa	Known RBP	5.74	□□□□□ -1.49
RBD2	YPL246C	YTP1	P53584	459 aa		5.74	□□□□□ -1.49
RBD2	YPL246C	RCF2	P53721	224 aa		5.74	□□□□□ -1.49
RBD2	YPL246C	ASA1	Q06822	443 aa		5.74	□□□□□ -1.49
RBD2	YPL246C	TPO1	Q07824	586 aa		5.74	□□□□□ -1.49
RBD2	YPL246C	FMP25	Q08023	583 aa		5.74	□□□□□ -1.49
RBD2	YPL246C	CIR2	Q08822	631 aa		5.74	□□□□□ -1.49
RBD2	YPL246C	NKP1	Q12493	238 aa		5.74	□□□□□ -1.49
RBD2	YPL246C	KCS1	Q12494	1050 aa		5.74	□□□□□ -1.49
RBD2	YPL246C	ATG11	Q12527	1178 aa		5.74	□□□□□ -1.49
RBD2	YPL246C	RTP1	Q12751	981 aa		5.74	□□□□□ -1.49
RBD2	YPL246C	ATP2	P00830	511 aa	Known RBP	5.73	□□□□□ -1.49
RBD2	YPL246C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	not detected
RBD2	YPL246C	MSS51	P32335	436 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	PHA2	P32452	334 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	SPR1	P32603	445 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	BEM3	P32873	1128 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	KES1	P35844	434 aa	Known RBP	5.73	□□□□□ -1.49
RBD2	YPL246C	PDX3	P38075	228 aa	Known RBP	5.73	□□□□□ -1.49
RBD2	YPL246C	ATG12	P38316	186 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	OTU2	P38747	307 aa	Known RBP	5.73	□□□□□ -1.49
RBD2	YPL246C	SCS2	P40075	244 aa	Known RBP	5.73	□□□□□ -1.49
RBD2	YPL246C	FMP33	P46998	180 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	IML2	P47031	731 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	NMA2	P53204	395 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	GND2	P53319	492 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	SNO2	P53823	222 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	MRPL22	P53881	309 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	RIP-Chip
RBD2	YPL246C	SLU7	Q02775	382 aa	Known RBP	5.73	□□□□□ -1.49
RBD2	YPL246C	MSC2	Q03455	724 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	RSM24	Q03976	319 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	ARP9	Q05123	467 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	THI20	Q08224	551 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	NRT1	Q08485	598 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	RGS2	Q99188	309 aa		5.73	□□□□□ -1.49
RBD2	YPL246C	YPR089W	O13585	888 aa		5.72	□□□□□ -1.49
RBD2	YPL246C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	RIP-Chip
RBD2	YPL246C	TPK1	P06244	397 aa		5.72	□□□□□ -1.49
RBD2	YPL246C	ERG20	P08524	352 aa	Known RBP	5.72	□□□□□ -1.49
RBD2	YPL246C	TUB1	P09733	447 aa	Known RBP	5.72	□□□□□ -1.49
RBD2	YPL246C	GAS1	P22146	559 aa	Known RBP	5.72	□□□□□ -1.49
RBD2	YPL246C	LRE1	P25579	583 aa	Known RBP	5.72	□□□□□ -1.49
RBD2	YPL246C	YCL068C	P25593	260 aa		5.72	□□□□□ -1.49
RBD2	YPL246C	SRP101	P32916	621 aa		5.72	□□□□□ -1.49
RBD2	YPL246C	BIT2	P38346	545 aa		5.72	□□□□□ -1.49
RBD2	YPL246C	YHI9	P38765	294 aa		5.72	□□□□□ -1.49
RBD2	YPL246C	SEC31	P38968	1273 aa	Known RBP	5.72	□□□□□ -1.49
RBD2	YPL246C	MEF2	P39677	819 aa		5.72	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms