RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOS3	YPL116W	YDL129W	Q07555	291 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	REX4	Q08237	289 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	BDS1	Q08347	646 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	SKI7	Q08491	747 aa	Predicted RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	TY1B-BR	Q12193	1756 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	TY1B-GR3	Q12316	1755 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	LDB17	Q12342	491 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	PAA1	Q12447	191 aa	Known RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	SRF1	Q12516	437 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	TY1B-OR	Q92393	1755 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	PAN1	P32521	1480 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	UNG1	P12887	359 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	HAP4	P14064	554 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	PDX1	P16451	410 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	TEC1	P18412	486 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	AFT1	P22149	690 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	VPS34	P22543	875 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	HXT2	P23585	541 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	CNB1	P25296	175 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	CPR4	P25334	318 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	GID7	P25569	745 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	GCD7	P32502	381 aa	Predicted RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	SUA5	P32579	426 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	MKS1	P34072	584 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	MTH1	P35198	433 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	MGE1	P38523	228 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	FMO1	P38866	432 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	EGD2	P38879	174 aa	Known RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	SOP4	P39543	234 aa	Predicted RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	SOK1	P40317	901 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	FYV10	P40492	516 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	IBA57	P47158	497 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	RRN9	P53437	365 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	SSU72	P53538	206 aa	Predicted RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	PRM1	P53835	661 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	NAF1	P53919	492 aa	Known RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	YPL107W	Q02873	248 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	NOG1	Q02892	647 aa	Known RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	VHS1	Q03785	461 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	SNX41	Q04053	625 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	ARA2	Q04212	335 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	GTB1	Q04924	702 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	AIM41	Q12032	185 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	BAG7	Q12128	409 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	MDM20	Q12387	796 aa	Known RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	POL30	P15873	258 aa	Known RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	RGR1	P19263	1082 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	AAT2	P23542	418 aa	Known RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	CLB2	P24869	491 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	SCJ1	P25303	377 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	RRP7	P25368	297 aa	Predicted RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	BOS1	P25385	244 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	ATG22	P25568	528 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	ATP7	P30902	174 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	ACH1	P32316	526 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	TFC1	P32367	649 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	PET309	P32522	965 aa	Predicted RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	PET127	P32606	800 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	CDC13	P32797	924 aa	Known RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	YBL055C	P34220	418 aa	Predicted RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	ANR2	P36090	516 aa	Predicted RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	DID4	P36108	232 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
HOS3	YPL116W	TSC10	P38342	320 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	PRS2	P38620	318 aa	Known RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	CCT4	P39078	528 aa	Known RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	FHL1	P39521	936 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	RSP5	P39940	809 aa	Known RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	YAT2	P40017	923 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	YJL068C	P40363	299 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	VHR1	P40522	640 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	GAB1	P41733	394 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	HXT14	P42833	540 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	CTH1	P47976	325 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	ATF2	P53296	535 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	BOP3	P53958	396 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	ALO1	P54783	526 aa	Known RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	SMA1	Q02651	245 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	RNY1	Q02933	434 aa	Known RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	YPL034W	Q03083	165 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	NGL2	Q03264	515 aa	Known RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	SSY1	Q03770	852 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	PLM2	Q04383	521 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	BCH1	Q05029	724 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	RQC1	Q05468	723 aa	Known RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	HRQ1	Q05549	1077 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	CRR1	Q05790	422 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	GPN3	Q06543	272 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
HOS3	YPL116W	SDO1	Q07953	250 aa	Known RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	TRE1	Q08919	783 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	VAM3	Q12241	283 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	RPN6	Q12377	434 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	DCN1	Q12395	269 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	RPO41	P13433	1351 aa	Known RBP	4.06	□□□□□ -1.76
HOS3	YPL116W	DCD1	P06773	312 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	RAD7	P06779	565 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	SPT3	P06844	337 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	HMG2	P12684	1045 aa		4.06	□□□□□ -1.76
HOS3	YPL116W	PRI2	P20457	528 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms