RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W SET6Q12529 373 aa1.44□□□□□ -2.18
SGF11YPL047W RPL15AP05748 204 aaKnown RBP1.43□□□□□ -2.18
SGF11YPL047W YML003WP0CF16 290 aa1.43□□□□□ -2.18
SGF11YPL047W POL3P15436 1097 aa1.43□□□□□ -2.18
SGF11YPL047W SIR1P21691 654 aa1.43□□□□□ -2.18
SGF11YPL047W MCK1P21965 375 aaKnown RBP1.43□□□□□ -2.18
SGF11YPL047W MTC6P38849 526 aa1.43□□□□□ -2.18
SGF11YPL047W YFR016CP43597 1233 aaKnown RBP1.43□□□□□ -2.18
SGF11YPL047W MAD3P47074 515 aa1.43□□□□□ -2.18
SGF11YPL047W YJR120WP47157 116 aa1.43□□□□□ -2.18
SGF11YPL047W PEX14P53112 341 aa1.43□□□□□ -2.18
SGF11YPL047W YGL082WP53155 381 aa1.43□□□□□ -2.18
SGF11YPL047W EIS1Q05050 843 aaKnown RBP1.43□□□□□ -2.18
SGF11YPL047W SWT1Q12104 458 aa1.43□□□□□ -2.18
SGF11YPL047W TMA17Q12513 150 aa1.43□□□□□ -2.18
SGF11YPL047W ADE3P07245 946 aaKnown RBP1.42□□□□□ -2.18
SGF11YPL047W SRP54P20424 541 aaKnown RBP1.42□□□□□ -2.18
SGF11YPL047W MRC1P25588 1096 aa1.42□□□□□ -2.18
SGF11YPL047W MCM4P30665 933 aaKnown RBP1.42□□□□□ -2.18
SGF11YPL047W YEL045CP32616 141 aa1.42□□□□□ -2.18
SGF11YPL047W GRX4P32642 244 aa1.42□□□□□ -2.18
SGF11YPL047W YNK1P36010 153 aaKnown RBP1.42□□□□□ -2.18
SGF11YPL047W PHD1P36093 366 aa1.42□□□□□ -2.18
SGF11YPL047W SRO77P38163 1010 aa1.42□□□□□ -2.18
SGF11YPL047W YIL060WP40519 144 aa1.42□□□□□ -2.18
SGF11YPL047W RPN11P43588 306 aaKnown RBP1.42□□□□□ -2.18
SGF11YPL047W RTT101P47050 842 aa1.42□□□□□ -2.18
SGF11YPL047W COS10P52924 374 aa1.42□□□□□ -2.18
SGF11YPL047W HCR1Q05775 265 aaKnown RBP1.42□□□□□ -2.18
SGF11YPL047W STP3Q05937 343 aa1.42□□□□□ -2.18
SGF11YPL047W CRN1Q06440 651 aa1.42□□□□□ -2.18
SGF11YPL047W CSR1Q06705 408 aaKnown RBP1.42□□□□□ -2.18
SGF11YPL047W FMP45Q07651 309 aa1.42□□□□□ -2.18
SGF11YPL047W MTF1P14908 341 aaKnown RBP1.41□□□□□ -2.18
SGF11YPL047W GAC1P28006 793 aa1.41□□□□□ -2.18
SGF11YPL047W ACH1P32316 526 aa1.41□□□□□ -2.18
SGF11YPL047W ARP2P32381 391 aaKnown RBP1.41□□□□□ -2.18
SGF11YPL047W HXT1P32465 570 aa1.41□□□□□ -2.18
SGF11YPL047W NDC1P32500 655 aa1.41□□□□□ -2.18
SGF11YPL047W MSN2P33748 704 aa1.41□□□□□ -2.18
SGF11YPL047W SPC34P36131 295 aa1.41□□□□□ -2.18
SGF11YPL047W GEX2P36173 615 aa1.41□□□□□ -2.18
SGF11YPL047W AAP1P37898 856 aaKnown RBP1.41□□□□□ -2.18
SGF11YPL047W PTH1P38876 190 aaKnown RBP1.41□□□□□ -2.18
SGF11YPL047W PHO90P39535 881 aa1.41□□□□□ -2.18
SGF11YPL047W YER130CP39959 443 aa1.41□□□□□ -2.18
SGF11YPL047W YIL161WP40449 235 aaKnown RBP1.41□□□□□ -2.18
SGF11YPL047W IMA1P53051 589 aa1.41□□□□□ -2.18
SGF11YPL047W RPM2Q02773 1202 aa1.41□□□□□ -2.18
SGF11YPL047W MSS11Q03825 758 aa1.41□□□□□ -2.18
SGF11YPL047W ERP1Q05359 219 aaKnown RBP1.41□□□□□ -2.18
SGF11YPL047W HEL2Q05580 639 aaKnown RBP1.41□□□□□ -2.18
SGF11YPL047W IWR1Q07532 353 aaPredicted RBP1.41□□□□□ -2.18
SGF11YPL047W RDR1Q08904 546 aa1.41□□□□□ -2.18
SGF11YPL047W ARP6Q12509 438 aa1.41□□□□□ -2.18
SGF11YPL047W SPO16P17122 198 aa1.4□□□□□ -2.19
SGF11YPL047W ATS1P31386 333 aa1.4□□□□□ -2.19
SGF11YPL047W PTR2P32901 601 aa1.4□□□□□ -2.19
SGF11YPL047W NUP120P35729 1037 aa1.4□□□□□ -2.19
SGF11YPL047W MIA40P36046 403 aa1.4□□□□□ -2.19
SGF11YPL047W NTR2P36118 322 aaPredicted RBP1.4□□□□□ -2.19
SGF11YPL047W AGP2P38090 596 aa1.4□□□□□ -2.19
SGF11YPL047W TIF5P38431 405 aaKnown RBP1.4□□□□□ -2.19
SGF11YPL047W ECM10P39987 644 aa1.4□□□□□ -2.19
SGF11YPL047W RPR2P40571 144 aa1.4□□□□□ -2.19
SGF11YPL047W AXL1P40851 1208 aa1.4□□□□□ -2.19
SGF11YPL047W SMK1P41808 388 aa1.4□□□□□ -2.19
SGF11YPL047W IDP2P41939 412 aa1.4□□□□□ -2.19
SGF11YPL047W NNF2P53253 936 aa1.4□□□□□ -2.19
SGF11YPL047W CEG1Q01159 459 aaPredicted RBP1.4□□□□□ -2.19
SGF11YPL047W RSM28Q03430 361 aa1.4□□□□□ -2.19
SGF11YPL047W GRC3Q07845 632 aa1.4□□□□□ -2.19
SGF11YPL047W MIS1P09440 975 aaKnown RBP1.39□□□□□ -2.19
SGF11YPL047W SWI4P25302 1093 aaKnown RBP1.39□□□□□ -2.19
SGF11YPL047W FSH1P38777 243 aaKnown RBP1.39□□□□□ -2.19
SGF11YPL047W YTA12P40341 825 aa1.39□□□□□ -2.19
SGF11YPL047W YFR020WP43600 232 aa1.39□□□□□ -2.19
SGF11YPL047W SDT1P53078 280 aa1.39□□□□□ -2.19
SGF11YPL047W PKP2P53170 491 aa1.39□□□□□ -2.19
SGF11YPL047W SOL4P53315 255 aa1.39□□□□□ -2.19
SGF11YPL047W RBA50Q04418 439 aa1.39□□□□□ -2.19
SGF11YPL047W CDC45Q08032 650 aa1.39□□□□□ -2.19
SGF11YPL047W TYR1P20049 452 aa1.38□□□□□ -2.19
SGF11YPL047W SEC62P21825 274 aa1.38□□□□□ -2.19
SGF11YPL047W SPC110P32380 944 aa1.38□□□□□ -2.19
SGF11YPL047W ESL2P36168 1195 aa1.38□□□□□ -2.19
SGF11YPL047W MTC4P38335 694 aaKnown RBP1.38□□□□□ -2.19
SGF11YPL047W ERR3P42222 437 aa1.38□□□□□ -2.19
SGF11YPL047W YGL039WP53183 348 aaKnown RBP1.38□□□□□ -2.19
SGF11YPL047W TEP1P53916 434 aa1.38□□□□□ -2.19
SGF11YPL047W ATG26Q06321 1198 aa1.38□□□□□ -2.19
SGF11YPL047W BRE1Q07457 700 aaKnown RBP1.38□□□□□ -2.19
SGF11YPL047W PDH1Q12428 516 aaKnown RBP1.38□□□□□ -2.19
SGF11YPL047W ATP2P00830 511 aaKnown RBP1.37□□□□□ -2.19
SGF11YPL047W RPL20AP0CX23 172 aaKnown RBP1.37□□□□□ -2.19
SGF11YPL047W RPL20BP0CX24 172 aaPredicted RBP1.37□□□□□ -2.19
SGF11YPL047W NAT1P12945 854 aaKnown RBP1.37□□□□□ -2.19
SGF11YPL047W CMK1P27466 446 aaKnown RBP1.37□□□□□ -2.19
SGF11YPL047W VPS17P32913 551 aa1.37□□□□□ -2.19
SGF11YPL047W APM3P38153 483 aa1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms