RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	PPH21	P23594	369 aa		5.89	□□□□□ -1.47
CSL4	YNL232W	MIH1	P23748	554 aa		5.89	□□□□□ -1.47
CSL4	YNL232W	LYP1	P32487	611 aa		5.89	□□□□□ -1.47
CSL4	YNL232W	DUT1	P33317	147 aa		5.89	□□□□□ -1.47
CSL4	YNL232W	TFC3	P34111	1160 aa		5.89	□□□□□ -1.47
CSL4	YNL232W	SRB2	P34162	210 aa		5.89	□□□□□ -1.47
CSL4	YNL232W	RAD26	P40352	1085 aa		5.89	□□□□□ -1.47
CSL4	YNL232W	PUS2	P53167	370 aa		5.89	□□□□□ -1.47
CSL4	YNL232W	YTP1	P53584	459 aa		5.89	□□□□□ -1.47
CSL4	YNL232W	ENA2	Q01896	1091 aa		5.89	□□□□□ -1.47
CSL4	YNL232W	POB3	Q04636	552 aa	Known RBP	5.89	□□□□□ -1.47
CSL4	YNL232W	COG4	Q06096	861 aa		5.89	□□□□□ -1.47
CSL4	YNL232W	AAD4	Q07747	329 aa		5.89	□□□□□ -1.47
CSL4	YNL232W	TMA46	Q12000	345 aa	Known RBP	5.89	□□□□□ -1.47
CSL4	YNL232W	YPL066W	Q12194	479 aa		5.89	□□□□□ -1.47
CSL4	YNL232W	ENA5	Q12691	1091 aa		5.89	□□□□□ -1.47
CSL4	YNL232W	INH1	P01097	85 aa		5.88	□□□□□ -1.47
CSL4	YNL232W	RED1	P14291	827 aa		5.88	□□□□□ -1.47
CSL4	YNL232W	MRPL8	P22353	238 aa		5.88	□□□□□ -1.47
CSL4	YNL232W	KAR9	P32526	644 aa		5.88	□□□□□ -1.47
CSL4	YNL232W	SAC6	P32599	642 aa	Known RBP	5.88	□□□□□ -1.47
CSL4	YNL232W	KAP104	P38217	918 aa	Known RBP	5.88	□□□□□ -1.47
CSL4	YNL232W	FSH1	P38777	243 aa	Known RBP	5.88	□□□□□ -1.47
CSL4	YNL232W	YER189W	P40104	122 aa		5.88	□□□□□ -1.47
CSL4	YNL232W	PHO86	P46956	311 aa		5.88	□□□□□ -1.47
CSL4	YNL232W	CTK3	P46963	296 aa	Predicted RBP	5.88	□□□□□ -1.47
CSL4	YNL232W	SET2	P46995	733 aa	Known RBP	5.88	□□□□□ -1.47
CSL4	YNL232W	UBX6	P47049	396 aa		5.88	□□□□□ -1.47
CSL4	YNL232W	HOP2	P53187	214 aa		5.88	□□□□□ -1.47
CSL4	YNL232W	INA17	Q02888	182 aa		5.88	□□□□□ -1.47
CSL4	YNL232W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	5.88	□□□□□ -1.47	not detected
CSL4	YNL232W	APL5	Q08951	932 aa	Known RBP	5.88	□□□□□ -1.47
CSL4	YNL232W	GLE1	Q12315	538 aa		5.88	□□□□□ -1.47
CSL4	YNL232W	HIS1	P00498	297 aa	Known RBP	5.87	□□□□□ -1.47
CSL4	YNL232W	MIS1	P09440	975 aa	Known RBP	5.87	□□□□□ -1.47
CSL4	YNL232W	YKR104W	P0CE69	306 aa		5.87	□□□□□ -1.47
CSL4	YNL232W	MNE1	P24720	663 aa		5.87	□□□□□ -1.47
CSL4	YNL232W	SNT1	P25357	1226 aa		5.87	□□□□□ -1.47
CSL4	YNL232W	ADY2	P25613	283 aa		5.87	□□□□□ -1.47
CSL4	YNL232W	GYP6	P32806	458 aa		5.87	□□□□□ -1.47
CSL4	YNL232W	YKL050C	P35736	922 aa		5.87	□□□□□ -1.47
CSL4	YNL232W	PIM1	P36775	1133 aa		5.87	□□□□□ -1.47
CSL4	YNL232W	SRP68	P38687	599 aa	Known RBP	5.87	□□□□□ -1.47
CSL4	YNL232W	PRM9	P39551	298 aa		5.87	□□□□□ -1.47
CSL4	YNL232W	PAN6	P40459	309 aa		5.87	□□□□□ -1.47
CSL4	YNL232W	CHA4	P43634	648 aa		5.87	□□□□□ -1.47
CSL4	YNL232W	YGR237C	P50089	785 aa		5.87	□□□□□ -1.47
CSL4	YNL232W	STP3	Q05937	343 aa		5.87	□□□□□ -1.47
CSL4	YNL232W	BSC6	Q08280	497 aa		5.87	□□□□□ -1.47
CSL4	YNL232W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.87	□□□□□ -1.47	not detected
CSL4	YNL232W	ALY1	P36117	915 aa		5.86	□□□□□ -1.47
CSL4	YNL232W	PXL1	P36166	706 aa		5.86	□□□□□ -1.47
CSL4	YNL232W	SPT8	P38915	602 aa		5.86	□□□□□ -1.47
CSL4	YNL232W	SPG5	P42933	373 aa		5.86	□□□□□ -1.47
CSL4	YNL232W	HXT16	P47185	567 aa		5.86	□□□□□ -1.47
CSL4	YNL232W	ASN2	P49090	572 aa	Known RBP	5.86	□□□□□ -1.47
CSL4	YNL232W	PEX31	P53203	462 aa		5.86	□□□□□ -1.47
CSL4	YNL232W	INP2	Q03824	705 aa		5.86	□□□□□ -1.47
CSL4	YNL232W	YPR114W	Q06107	315 aa		5.86	□□□□□ -1.47
CSL4	YNL232W	AIM39	Q08223	395 aa		5.86	□□□□□ -1.47
CSL4	YNL232W	GUP2	Q08929	609 aa		5.86	□□□□□ -1.47
CSL4	YNL232W	YPL272C	Q08984	517 aa		5.86	□□□□□ -1.47
CSL4	YNL232W	RPS3	P05750	240 aa	Known RBP	5.85	□□□□□ -1.47
CSL4	YNL232W	TUB1	P09733	447 aa	Known RBP	5.85	□□□□□ -1.47
CSL4	YNL232W	MPH2	P0CD99	609 aa		5.85	□□□□□ -1.47
CSL4	YNL232W	INO1	P11986	533 aa		5.85	□□□□□ -1.47
CSL4	YNL232W	PUT4	P15380	627 aa		5.85	□□□□□ -1.47
CSL4	YNL232W	HEM3	P28789	327 aa		5.85	□□□□□ -1.47
CSL4	YNL232W	YPT53	P36019	220 aa		5.85	□□□□□ -1.47
CSL4	YNL232W	BCD1	P38772	366 aa		5.85	□□□□□ -1.47
CSL4	YNL232W	TMA108	P40462	946 aa		5.85	□□□□□ -1.47
CSL4	YNL232W	SAP185	P40856	1058 aa		5.85	□□□□□ -1.47
CSL4	YNL232W	AIP1	P46680	615 aa	Known RBP	5.85	□□□□□ -1.47
CSL4	YNL232W	RPS10B	P46784	105 aa	Known RBP	5.85	□□□□□ -1.47
CSL4	YNL232W	EXG2	P52911	562 aa		5.85	□□□□□ -1.47
CSL4	YNL232W	CWC22	P53333	577 aa	Known RBP	5.85	□□□□□ -1.47
CSL4	YNL232W	YGR283C	P53336	341 aa	Predicted RBP	5.85	□□□□□ -1.47
CSL4	YNL232W	IPI3	P53877	555 aa		5.85	□□□□□ -1.47
CSL4	YNL232W	VAC7	P53950	1165 aa		5.85	□□□□□ -1.47
CSL4	YNL232W	TRS23	Q03784	219 aa		5.85	□□□□□ -1.47
CSL4	YNL232W	PPN1	Q04119	674 aa		5.85	□□□□□ -1.47
CSL4	YNL232W	UFO1	Q04511	668 aa		5.85	□□□□□ -1.47
CSL4	YNL232W	YOL024W	Q08172	172 aa		5.85	□□□□□ -1.47
CSL4	YNL232W	RPS10A	Q08745	105 aa	Predicted RBP	5.85	□□□□□ -1.47
CSL4	YNL232W	RPL22A	P05749	121 aa	Known RBP	5.84	□□□□□ -1.47
CSL4	YNL232W	CDC33	P07260	213 aa	Known RBP	5.84	□□□□□ -1.47
CSL4	YNL232W	MTF2	P10849	440 aa		5.84	□□□□□ -1.47
CSL4	YNL232W	GLN4	P13188	809 aa	Known RBP	5.84	□□□□□ -1.47
CSL4	YNL232W	LDB16	P25587	256 aa		5.84	□□□□□ -1.47
CSL4	YNL232W	LYS9	P38999	446 aa		5.84	□□□□□ -1.47
CSL4	YNL232W	FAU1	P40099	211 aa		5.84	□□□□□ -1.47
CSL4	YNL232W	ZIM17	P42844	174 aa		5.84	□□□□□ -1.47
CSL4	YNL232W	ALK1	P43633	760 aa	Known RBP	5.84	□□□□□ -1.47
CSL4	YNL232W	PMT3	P47190	753 aa		5.84	□□□□□ -1.47
CSL4	YNL232W	YGL260W	P53056	76 aa		5.84	□□□□□ -1.47
CSL4	YNL232W	TYW3	P53177	273 aa		5.84	□□□□□ -1.47
CSL4	YNL232W	YNL040W	P53960	456 aa	Predicted RBP	5.84	□□□□□ -1.47
CSL4	YNL232W	EGD1	Q02642	157 aa	Known RBP	5.84	□□□□□ -1.47
CSL4	YNL232W	ELP3	Q02908	557 aa	Known RBP	5.84	□□□□□ -1.47
CSL4	YNL232W	YAP7	Q08182	245 aa		5.84	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms