RNA–Protein interactions for RNA: YMR154C

RIM13, Transcript of Calpain-like cysteine protease, yeast

Gene RIM13, Length 2,184 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM13	YMR154C	UIP3	P39547	235 aa		3.18	□□□□□ -1.9
RIM13	YMR154C	YJL107C	P42947	387 aa		3.18	□□□□□ -1.9
RIM13	YMR154C	NMD5	P46970	1048 aa		3.18	□□□□□ -1.9
RIM13	YMR154C	SNU56	Q03782	492 aa	Known RBP	3.18	□□□□□ -1.9
RIM13	YMR154C	RPC11	Q04307	110 aa	Predicted RBP	3.18	□□□□□ -1.9
RIM13	YMR154C	MFB1	Q04922	465 aa		3.18	□□□□□ -1.9
RIM13	YMR154C	HUA2	Q12134	243 aa		3.18	□□□□□ -1.9
RIM13	YMR154C	ERG11	P10614	530 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	OCT1	P35999	772 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	LHS1	P36016	881 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	YBL029W	P38201	376 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	DIA4	P38705	446 aa	Predicted RBP	3.17	□□□□□ -1.9
RIM13	YMR154C	RGI2	P40188	164 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	PKP1	P40530	394 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	DPB11	P47027	764 aa	Predicted RBP	3.17	□□□□□ -1.9
RIM13	YMR154C	IST1	P53843	298 aa	Predicted RBP	3.17	□□□□□ -1.9
RIM13	YMR154C	TPO3	Q06451	622 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	YEH1	Q07804	573 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	INH1	P01097	85 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	GAL4	P04386	881 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	SEC53	P07283	254 aa	Known RBP	3.17	□□□□□ -1.9
RIM13	YMR154C	ARD1	P07347	238 aa	Predicted RBP	3.17	□□□□□ -1.9
RIM13	YMR154C	KGD1	P20967	1014 aa	Known RBP	3.17	□□□□□ -1.9
RIM13	YMR154C	PRE8	P23639	250 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	PXL1	P36166	706 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	RKM3	P38222	552 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	ARN1	P38731	627 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	YEL057C	P39983	233 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	GLO1	P50107	326 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	STR3	P53101	465 aa	Known RBP	3.17	□□□□□ -1.9
RIM13	YMR154C	LCL3	P53153	274 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	ATP23	P53722	227 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	ASI1	P54074	624 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	TCO89	Q08921	799 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	INP53	Q12271	1107 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	YPT6	Q99260	215 aa		3.17	□□□□□ -1.9
RIM13	YMR154C	YPT1	P01123	206 aa	Known RBP	3.16	□□□□□ -1.9
RIM13	YMR154C	GCN4	P03069	281 aa		3.16	□□□□□ -1.9
RIM13	YMR154C	TKL1	P23254	680 aa	Known RBP	3.16	□□□□□ -1.9
RIM13	YMR154C	CLB2	P24869	491 aa		3.16	□□□□□ -1.9
RIM13	YMR154C	SPO22	P40511	975 aa		3.16	□□□□□ -1.9
RIM13	YMR154C	IRC7	P43623	340 aa		3.16	□□□□□ -1.9
RIM13	YMR154C	ORC5	P50874	479 aa		3.16	□□□□□ -1.9
RIM13	YMR154C	MAK10	Q02197	733 aa		3.16	□□□□□ -1.9
RIM13	YMR154C	UTP21	Q06078	939 aa	Predicted RBP	3.16	□□□□□ -1.9
RIM13	YMR154C	PSR1	Q07800	427 aa		3.16	□□□□□ -1.9
RIM13	YMR154C	YOR389W	Q08912	624 aa		3.16	□□□□□ -1.9
RIM13	YMR154C	NDJ1	Q12366	352 aa		3.16	□□□□□ -1.9
RIM13	YMR154C	HXK2	P04807	486 aa	Known RBP	3.15	□□□□□ -1.9
RIM13	YMR154C	YMR085W	P0CF18	432 aa		3.15	□□□□□ -1.9
RIM13	YMR154C	MRP2	P10663	115 aa	Predicted RBP	3.15	□□□□□ -1.9
RIM13	YMR154C	HOM2	P13663	365 aa	Known RBP	3.15	□□□□□ -1.9
RIM13	YMR154C	CBS1	P14066	229 aa		3.15	□□□□□ -1.9
RIM13	YMR154C	APN1	P22936	367 aa		3.15	□□□□□ -1.9
RIM13	YMR154C	SGM1	P47166	707 aa		3.15	□□□□□ -1.9
RIM13	YMR154C	RPS7B	P48164	190 aa	Known RBP	3.15	□□□□□ -1.9
RIM13	YMR154C	YPL071C	Q02864	156 aa		3.15	□□□□□ -1.9
RIM13	YMR154C	RSC9	Q03124	581 aa		3.15	□□□□□ -1.9
RIM13	YMR154C	PFA4	Q12006	378 aa		3.15	□□□□□ -1.9
RIM13	YMR154C	RCN2	Q12044	265 aa		3.15	□□□□□ -1.9
RIM13	YMR154C	TAH18	Q12181	623 aa		3.15	□□□□□ -1.9
RIM13	YMR154C	YCR006C	P25350	157 aa		3.15	□□□□□ -1.91
RIM13	YMR154C	SRO77	P38163	1010 aa		3.15	□□□□□ -1.91
RIM13	YMR154C	ELO1	P39540	310 aa		3.15	□□□□□ -1.91
RIM13	YMR154C	BUR6	P40096	142 aa		3.15	□□□□□ -1.91
RIM13	YMR154C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
RIM13	YMR154C	MET28	P40573	187 aa		3.15	□□□□□ -1.91
RIM13	YMR154C	APT1	P49435	187 aa	Known RBP	3.15	□□□□□ -1.91
RIM13	YMR154C	YTP1	P53584	459 aa		3.15	□□□□□ -1.91
RIM13	YMR154C	MRPL19	P53875	158 aa		3.15	□□□□□ -1.91
RIM13	YMR154C	EFM6	P53970	246 aa		3.15	□□□□□ -1.91
RIM13	YMR154C	LGE1	Q02796	332 aa	Known RBP	3.15	□□□□□ -1.91
RIM13	YMR154C	YML037C	Q03703	340 aa		3.15	□□□□□ -1.91
RIM13	YMR154C	FRE3	Q08905	711 aa		3.15	□□□□□ -1.91
RIM13	YMR154C	ARG3	P05150	338 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	NUP1	P20676	1076 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	ERG3	P32353	365 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	NPL6	P32832	435 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	TIF3	P34167	436 aa	Known RBP	3.14	□□□□□ -1.91
RIM13	YMR154C	RPS10B	P46784	105 aa	Known RBP	3.14	□□□□□ -1.91
RIM13	YMR154C	YGR250C	P53316	781 aa	Known RBP	3.14	□□□□□ -1.91
RIM13	YMR154C	ARP9	Q05123	467 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	COQ11	Q05892	277 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	PDR8	Q06149	701 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	LUC7	Q07508	261 aa	Predicted RBP	3.14	□□□□□ -1.91
RIM13	YMR154C	MCH4	Q08268	501 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	BUD7	Q08754	746 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	SCM3	Q12334	223 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	TAD3	Q9URQ3	322 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	PGK1	P00560	416 aa	Known RBP	3.14	□□□□□ -1.91
RIM13	YMR154C	ROX1	P25042	368 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	PUP3	P25451	205 aa	Known RBP	3.14	□□□□□ -1.91
RIM13	YMR154C	PGS1	P25578	521 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	NFU1	P32860	256 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	AGP2	P38090	596 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	LEU5	P38702	357 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	IDP3	P53982	420 aa	Known RBP	3.14	□□□□□ -1.91
RIM13	YMR154C	RPS10A	Q08745	105 aa	Predicted RBP	3.14	□□□□□ -1.91
RIM13	YMR154C	GRX6	Q12438	231 aa		3.14	□□□□□ -1.91
RIM13	YMR154C	YNL162W-A	Q3E7A8	72 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms