RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C RPL43AP0CX25 92 aaKnown RBP3.5□□□□□ -1.85
SDO1YLR022C RPL43BP0CX26 92 aa3.5□□□□□ -1.85
SDO1YLR022C GAC1P28006 793 aa3.5□□□□□ -1.85
SDO1YLR022C HXT4P32467 576 aa3.5□□□□□ -1.85
SDO1YLR022C LOT5P34234 306 aa3.5□□□□□ -1.85
SDO1YLR022C KTR3P38130 404 aaPredicted RBP3.5□□□□□ -1.85
SDO1YLR022C RNR4P49723 345 aaKnown RBP3.5□□□□□ -1.85
SDO1YLR022C ZPR1P53303 486 aaKnown RBP3.5□□□□□ -1.85
SDO1YLR022C MDM1Q01846 1127 aa3.5□□□□□ -1.85
SDO1YLR022C RTK1Q12100 620 aaPredicted RBP3.5□□□□□ -1.85
SDO1YLR022C TAH18Q12181 623 aa3.5□□□□□ -1.85
SDO1YLR022C VPS33P20795 691 aa3.49□□□□□ -1.85
SDO1YLR022C DGR2P32330 852 aa3.49□□□□□ -1.85
SDO1YLR022C EAF5P39995 279 aa3.49□□□□□ -1.85
SDO1YLR022C XBP1P40489 647 aa3.49□□□□□ -1.85
SDO1YLR022C SAP4P53036 818 aa3.49□□□□□ -1.85
SDO1YLR022C PEF1P53238 335 aa3.49□□□□□ -1.85
SDO1YLR022C SLG1P54867 378 aa3.49□□□□□ -1.85
SDO1YLR022C YDL144CQ07589 356 aa3.49□□□□□ -1.85
SDO1YLR022C TGS1Q12052 315 aa3.49□□□□□ -1.85
SDO1YLR022C SPE3Q12074 293 aaKnown RBP3.49□□□□□ -1.85
SDO1YLR022C RVB2Q12464 471 aaKnown RBP3.49□□□□□ -1.85
SDO1YLR022C ARP6Q12509 438 aa3.49□□□□□ -1.85
SDO1YLR022C SRP54P20424 541 aaKnown RBP3.48□□□□□ -1.85
SDO1YLR022C ATP12P22135 325 aa3.48□□□□□ -1.85
SDO1YLR022C ANP1P32629 500 aa3.48□□□□□ -1.85
SDO1YLR022C MYO3P36006 1272 aa3.48□□□□□ -1.85
SDO1YLR022C YPT10P38146 199 aa3.48□□□□□ -1.85
SDO1YLR022C SRP68P38687 599 aaKnown RBP3.48□□□□□ -1.85
SDO1YLR022C YJL193WP39542 402 aa3.48□□□□□ -1.85
SDO1YLR022C GPP2P40106 250 aaKnown RBP3.48□□□□□ -1.85
SDO1YLR022C ULP2P40537 1034 aaPredicted RBP3.48□□□□□ -1.85
SDO1YLR022C GAT1P43574 510 aa3.48□□□□□ -1.85
SDO1YLR022C PSP1P50896 841 aaKnown RBP3.48□□□□□ -1.85
SDO1YLR022C MLC1P53141 149 aa3.48□□□□□ -1.85
SDO1YLR022C YOR389WQ08912 624 aa3.48□□□□□ -1.85
SDO1YLR022C YPL278CQ08990 100 aa3.48□□□□□ -1.85
SDO1YLR022C YBR056W-AI2HB52 66 aa3.47□□□□□ -1.85
SDO1YLR022C GLN3P18494 730 aa3.47□□□□□ -1.85
SDO1YLR022C RNR3P21672 869 aaKnown RBP3.47□□□□□ -1.85
SDO1YLR022C RPC34P32910 317 aa3.47□□□□□ -1.85
SDO1YLR022C RMA1P36001 430 aaKnown RBP3.47□□□□□ -1.85
SDO1YLR022C UBP11P36026 717 aa3.47□□□□□ -1.85
SDO1YLR022C SRX1P36077 127 aa3.47□□□□□ -1.85
SDO1YLR022C YPS6P40583 537 aa3.47□□□□□ -1.85
SDO1YLR022C IRC5P43610 853 aa3.47□□□□□ -1.85
SDO1YLR022C ADA2Q02336 434 aa3.47□□□□□ -1.85
SDO1YLR022C GFD1Q04839 188 aaKnown RBP3.47□□□□□ -1.85
SDO1YLR022C HEL2Q05580 639 aaKnown RBP3.47□□□□□ -1.85
SDO1YLR022C ORM2Q06144 216 aa3.47□□□□□ -1.85
SDO1YLR022C NGL1Q08213 363 aaKnown RBP3.47□□□□□ -1.85
SDO1YLR022C YPR027CQ12079 277 aa3.47□□□□□ -1.85
SDO1YLR022C SUL2Q12325 893 aa3.47□□□□□ -1.85
SDO1YLR022C PDR18P53756 1333 aa3.46□□□□□ -1.85
SDO1YLR022C AQY1P0CD91 305 aa3.46□□□□□ -1.86
SDO1YLR022C AEP2P22136 580 aa3.46□□□□□ -1.86
SDO1YLR022C GSY2P27472 705 aa3.46□□□□□ -1.86
SDO1YLR022C IMP2'P32351 346 aa3.46□□□□□ -1.86
SDO1YLR022C DAL3P32459 195 aa3.46□□□□□ -1.86
SDO1YLR022C GCD7P32502 381 aaPredicted RBP3.46□□□□□ -1.86
SDO1YLR022C SWE1P32944 819 aa3.46□□□□□ -1.86
SDO1YLR022C APD1P38281 316 aa3.46□□□□□ -1.86
SDO1YLR022C OSH3P38713 996 aaKnown RBP3.46□□□□□ -1.86
SDO1YLR022C YNG2P38806 282 aaKnown RBP3.46□□□□□ -1.86
SDO1YLR022C YFL015CP43578 164 aa3.46□□□□□ -1.86
SDO1YLR022C YGL036WP53185 909 aaPredicted RBP3.46□□□□□ -1.86
SDO1YLR022C SMA1Q02651 245 aa3.46□□□□□ -1.86
SDO1YLR022C PHM6Q05637 104 aa3.46□□□□□ -1.86
SDO1YLR022C SMC5Q08204 1093 aa3.46□□□□□ -1.86
SDO1YLR022C RMP1Q12530 201 aa3.46□□□□□ -1.86
SDO1YLR022C VPS5Q92331 675 aa3.46□□□□□ -1.86
SDO1YLR022C RAD50P12753 1312 aa3.45□□□□□ -1.86
SDO1YLR022C RIP1P08067 215 aa3.45□□□□□ -1.86
SDO1YLR022C CYM1P32898 989 aa3.45□□□□□ -1.86
SDO1YLR022C BAT1P38891 393 aaKnown RBP3.45□□□□□ -1.86
SDO1YLR022C EXO1P39875 702 aa3.45□□□□□ -1.86
SDO1YLR022C PSA1P41940 361 aaKnown RBP3.45□□□□□ -1.86
SDO1YLR022C TDA10P42938 290 aa3.45□□□□□ -1.86
SDO1YLR022C RMD8P43620 662 aa3.45□□□□□ -1.86
SDO1YLR022C NIT2P47016 307 aa3.45□□□□□ -1.86
SDO1YLR022C IML2P47031 731 aa3.45□□□□□ -1.86
SDO1YLR022C ATP23P53722 227 aa3.45□□□□□ -1.86
SDO1YLR022C MYO5Q04439 1219 aaKnown RBP3.45□□□□□ -1.86
SDO1YLR022C YDR341CQ05506 607 aaKnown RBP3.45□□□□□ -1.86
SDO1YLR022C YLR456WQ06199 204 aa3.45□□□□□ -1.86
SDO1YLR022C LEA1Q08963 238 aaPredicted RBP3.45□□□□□ -1.86
SDO1YLR022C RGT2Q12300 763 aa3.45□□□□□ -1.86
SDO1YLR022C FRE7Q12333 620 aa3.45□□□□□ -1.86
SDO1YLR022C YIL046W-AQ3E7Z4 54 aa3.45□□□□□ -1.86
SDO1YLR022C AAC1P04710 309 aa3.44□□□□□ -1.86
SDO1YLR022C YEL076C-AP0CX16 216 aa3.44□□□□□ -1.86
SDO1YLR022C YLR464WP0CX17 216 aa3.44□□□□□ -1.86
SDO1YLR022C MAK31P23059 88 aa3.44□□□□□ -1.86
SDO1YLR022C PPH22P23595 377 aa3.44□□□□□ -1.86
SDO1YLR022C CWH43P25618 953 aa3.44□□□□□ -1.86
SDO1YLR022C DSS4P32601 143 aa3.44□□□□□ -1.86
SDO1YLR022C BEM3P32873 1128 aa3.44□□□□□ -1.86
SDO1YLR022C AAP1P37898 856 aaKnown RBP3.44□□□□□ -1.86
SDO1YLR022C YEL076CP39971 216 aa3.44□□□□□ -1.86
SDO1YLR022C BST1P43571 1029 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms