RNA–Protein interactions for RNA: YIR013C

GAT4, Transcript of Protein containing GATA family zinc finger motifs, yeast

Gene GAT4, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GAT4	YIR013C	ATF2	P53296	535 aa		5.21	□□□□□ -1.58
GAT4	YIR013C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.58	not detected
GAT4	YIR013C	INN1	P53901	409 aa		5.21	□□□□□ -1.58
GAT4	YIR013C	ATG16	Q03818	150 aa		5.21	□□□□□ -1.58
GAT4	YIR013C	TPO1	Q07824	586 aa		5.21	□□□□□ -1.58
GAT4	YIR013C	PUS7	Q08647	676 aa	Known RBP	5.21	□□□□□ -1.58
GAT4	YIR013C	THI21	Q08975	551 aa		5.21	□□□□□ -1.58
GAT4	YIR013C	SMF3	Q12078	473 aa	Predicted RBP	5.21	□□□□□ -1.58
GAT4	YIR013C	YLR049C	Q12110	428 aa		5.21	□□□□□ -1.58
GAT4	YIR013C	MCD1	Q12158	566 aa		5.21	□□□□□ -1.58
GAT4	YIR013C	MST1	P07236	462 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	HOM3	P10869	527 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	YPK1	P12688	680 aa	Known RBP	5.2	□□□□□ -1.58
GAT4	YIR013C	YSR3	P23501	404 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	PHO84	P25297	587 aa	Known RBP	5.2	□□□□□ -1.58
GAT4	YIR013C	SPC110	P32380	944 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	SPS19	P32573	292 aa	Known RBP	5.2	□□□□□ -1.58
GAT4	YIR013C	PHO11	P35842	467 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	NTR2	P36118	322 aa	Predicted RBP	5.2	□□□□□ -1.58
GAT4	YIR013C	FMP46	P36141	133 aa	Known RBP	5.2	□□□□□ -1.58
GAT4	YIR013C	RCK2	P38623	610 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	HIS2	P38635	335 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	PHO12	P38693	467 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	YHR182W	P38870	785 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	PMC1	P38929	1173 aa	Predicted RBP	5.2	□□□□□ -1.58
GAT4	YIR013C	ALA1	P40825	983 aa	Known RBP	5.2	□□□□□ -1.58
GAT4	YIR013C	ALY2	P47029	1046 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	TIM13	P53299	105 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	FRE4	P53746	719 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	MOT3	P54785	490 aa	Known RBP	5.2	□□□□□ -1.58
GAT4	YIR013C	CIA1	Q05583	330 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	CIR2	Q08822	631 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	PGC1	Q08959	321 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	YOR342C	Q12182	319 aa		5.2	□□□□□ -1.58
GAT4	YIR013C	CMR1	Q12510	522 aa	Known RBP	5.2	□□□□□ -1.58
GAT4	YIR013C	YLR462W	O13556	202 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	GFA1	P14742	717 aa	Known RBP	5.19	□□□□□ -1.58
GAT4	YIR013C	APA1	P16550	321 aa	Known RBP	5.19	□□□□□ -1.58
GAT4	YIR013C	SFL1	P20134	766 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	DBF4	P32325	704 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	YBL055C	P34220	418 aa	Predicted RBP	5.19	□□□□□ -1.58
GAT4	YIR013C	SOL2	P37262	315 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	YHL049C	P38722	271 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	DSS1	P39112	969 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	LCP5	P40079	357 aa	Predicted RBP	5.19	□□□□□ -1.58
GAT4	YIR013C	KHA1	P40309	873 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	YFL064C	P43540	174 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	RRT5	P43607	289 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	YJL132W	P47014	750 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	COG1	P53079	417 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	NOG2	P53742	486 aa	Known RBP	5.19	□□□□□ -1.58
GAT4	YIR013C	YNL108C	P53929	270 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	ROT1	Q03691	256 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	IVY1	Q04934	453 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	OMS1	Q06668	471 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	HER1	Q12276	1246 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	GPM3	Q12326	303 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	YBL111C	Q3E7Y5	667 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	NHA1	Q99271	985 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	IZH4	Q99393	312 aa		5.19	□□□□□ -1.58
GAT4	YIR013C	CYR1	P08678	2026 aa	Known RBP	5.19	□□□□□ -1.58
GAT4	YIR013C	CPA1	P07258	411 aa	Known RBP	5.18	□□□□□ -1.58
GAT4	YIR013C	YCR102C	P25608	368 aa		5.18	□□□□□ -1.58
GAT4	YIR013C	MEI4	P29467	408 aa		5.18	□□□□□ -1.58
GAT4	YIR013C	PAP1	P29468	568 aa	Known RBP	5.18	□□□□□ -1.58
GAT4	YIR013C	MFT1	P33441	392 aa	Known RBP	5.18	□□□□□ -1.58
GAT4	YIR013C	EAP1	P36041	632 aa	Known RBP	5.18	□□□□□ -1.58
GAT4	YIR013C	PCL5	P38794	229 aa		5.18	□□□□□ -1.58
GAT4	YIR013C	DHH1	P39517	506 aa	Known RBP	5.18	□□□□□ -1.58
GAT4	YIR013C	YEL073C	P39974	107 aa		5.18	□□□□□ -1.58
GAT4	YIR013C	IST3	P40565	148 aa	Predicted RBP	5.18	□□□□□ -1.58
GAT4	YIR013C	TCB2	P48231	1178 aa		5.18	□□□□□ -1.58
GAT4	YIR013C	ESF2	P53743	316 aa	Known RBP	5.18	□□□□□ -1.58
GAT4	YIR013C	ECM9	Q02202	377 aa		5.18	□□□□□ -1.58
GAT4	YIR013C	THI7	Q05998	598 aa		5.18	□□□□□ -1.58
GAT4	YIR013C	VAC14	Q06708	880 aa		5.18	□□□□□ -1.58
GAT4	YIR013C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
GAT4	YIR013C	TEN1	Q07921	160 aa		5.18	□□□□□ -1.58
GAT4	YIR013C	TGL5	Q12043	749 aa		5.18	□□□□□ -1.58
GAT4	YIR013C	COX1	P00401	534 aa		5.17	□□□□□ -1.58
GAT4	YIR013C	SPS1	P08458	490 aa		5.17	□□□□□ -1.58
GAT4	YIR013C	PDR1	P12383	1068 aa		5.17	□□□□□ -1.58
GAT4	YIR013C	CKI1	P20485	582 aa		5.17	□□□□□ -1.58
GAT4	YIR013C	VPS34	P22543	875 aa		5.17	□□□□□ -1.58
GAT4	YIR013C	DCC1	P25559	380 aa		5.17	□□□□□ -1.58
GAT4	YIR013C	AEP1	P32493	518 aa		5.17	□□□□□ -1.58
GAT4	YIR013C	MRS6	P32864	603 aa	Known RBP	5.17	□□□□□ -1.58
GAT4	YIR013C	TFA2	P36145	328 aa		5.17	□□□□□ -1.58
GAT4	YIR013C	DBP8	P38719	431 aa		5.17	□□□□□ -1.58
GAT4	YIR013C	END3	P39013	349 aa		5.17	□□□□□ -1.58
GAT4	YIR013C	FLC2	P39719	783 aa		5.17	□□□□□ -1.58
GAT4	YIR013C	ATM1	P40416	690 aa		5.17	□□□□□ -1.58
GAT4	YIR013C	BUD13	P46947	266 aa	Predicted RBP	5.17	□□□□□ -1.58
GAT4	YIR013C	BNA3	P47039	444 aa	Known RBP	5.17	□□□□□ -1.58
GAT4	YIR013C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
GAT4	YIR013C	APT1	P49435	187 aa	Known RBP	5.17	□□□□□ -1.58
GAT4	YIR013C	STR3	P53101	465 aa	Known RBP	5.17	□□□□□ -1.58
GAT4	YIR013C	JJJ1	P53863	590 aa		5.17	□□□□□ -1.58
GAT4	YIR013C	YMR114C	Q04471	368 aa	Known RBP	5.17	□□□□□ -1.58
GAT4	YIR013C	SML1	Q04964	104 aa		5.17	□□□□□ -1.58

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