RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W PTC6P25646 442 aa3.27□□□□□ -1.89
USE1YGL098W RAD27P26793 382 aa3.27□□□□□ -1.89
USE1YGL098W KRE2P27809 442 aa3.27□□□□□ -1.89
USE1YGL098W PRR1P28708 518 aa3.27□□□□□ -1.89
USE1YGL098W MLF3P32047 452 aa3.27□□□□□ -1.89
USE1YGL098W PET309P32522 965 aaPredicted RBP3.27□□□□□ -1.89
USE1YGL098W HBS1P32769 611 aaKnown RBP3.27□□□□□ -1.89
USE1YGL098W VAM7P32912 316 aa3.27□□□□□ -1.89
USE1YGL098W PRP40P33203 583 aaKnown RBP3.27□□□□□ -1.89
USE1YGL098W GDH2P33327 1092 aaKnown RBP3.27□□□□□ -1.89
USE1YGL098W KTR2P33550 425 aa3.27□□□□□ -1.89
USE1YGL098W GRX7P38068 203 aa3.27□□□□□ -1.89
USE1YGL098W DUG2P38149 878 aa3.27□□□□□ -1.89
USE1YGL098W PBP2P38151 413 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
USE1YGL098W YBL028CP38202 106 aa3.27□□□□□ -1.89
USE1YGL098W POP7P38291 140 aa3.27□□□□□ -1.89
USE1YGL098W YBP1P38315 674 aa3.27□□□□□ -1.89
USE1YGL098W YBR285WP38354 144 aa3.27□□□□□ -1.89
USE1YGL098W IMD2P38697 523 aaKnown RBP3.27□□□□□ -1.89
USE1YGL098W YHR202WP38887 602 aa3.27□□□□□ -1.89
USE1YGL098W PHM8P40025 321 aa3.27□□□□□ -1.89
USE1YGL098W SOK1P40317 901 aa3.27□□□□□ -1.89
USE1YGL098W NUP82P40368 713 aa3.27□□□□□ -1.89
USE1YGL098W HPM1P40481 377 aa3.27□□□□□ -1.89
USE1YGL098W YRB2P40517 327 aa3.27□□□□□ -1.89
USE1YGL098W MAD3P47074 515 aa3.27□□□□□ -1.89
USE1YGL098W YJR008WP47085 338 aa3.27□□□□□ -1.89
USE1YGL098W YPT32P51996 222 aaKnown RBP3.27□□□□□ -1.89
USE1YGL098W MNT2P53059 558 aa3.27□□□□□ -1.89
USE1YGL098W SOL4P53315 255 aa3.27□□□□□ -1.89
USE1YGL098W CAF40P53829 373 aa3.27□□□□□ -1.89
USE1YGL098W ZDS2P54786 942 aa3.27□□□□□ -1.89
USE1YGL098W REC102Q02721 264 aa3.27□□□□□ -1.89
USE1YGL098W RPN4Q03465 531 aa3.27□□□□□ -1.89
USE1YGL098W ADI1Q03677 179 aa3.27□□□□□ -1.89
USE1YGL098W YMR010WQ03687 405 aa3.27□□□□□ -1.89
USE1YGL098W SEG1Q04279 960 aa3.27□□□□□ -1.89
USE1YGL098W ADE13Q05911 482 aaKnown RBP3.27□□□□□ -1.89
USE1YGL098W GIC2Q06648 383 aa3.27□□□□□ -1.89
USE1YGL098W IWR1Q07532 353 aaPredicted RBP3.27□□□□□ -1.89
USE1YGL098W YDL124WQ07551 312 aaKnown RBP3.27□□□□□ -1.89
USE1YGL098W FMP45Q07651 309 aa3.27□□□□□ -1.89
USE1YGL098W NTG2Q08214 380 aa3.27□□□□□ -1.89
USE1YGL098W YOL075CQ08234 1294 aa3.27□□□□□ -1.89
USE1YGL098W RSB1Q08417 382 aa3.27□□□□□ -1.89
USE1YGL098W YNG1Q08465 219 aa3.27□□□□□ -1.89
USE1YGL098W SKI7Q08491 747 aaPredicted RBP3.27□□□□□ -1.89
USE1YGL098W FLC1Q08967 793 aa3.27□□□□□ -1.89
USE1YGL098W FMP40Q08968 688 aaPredicted RBP3.27□□□□□ -1.89
USE1YGL098W ACM1Q08981 209 aa3.27□□□□□ -1.89
USE1YGL098W YLR053CQ12026 108 aa3.27□□□□□ -1.89
USE1YGL098W TAH18Q12181 623 aa3.27□□□□□ -1.89
USE1YGL098W GTT2Q12390 233 aa3.27□□□□□ -1.89
USE1YGL098W YOR131CQ12486 218 aa3.27□□□□□ -1.89
USE1YGL098W DCP1Q12517 231 aaPredicted RBP3.27□□□□□ -1.89
USE1YGL098W AI5_ALPHAQ9ZZX1 630 aa3.27□□□□□ -1.89
USE1YGL098W TRP3P00937 484 aa3.26□□□□□ -1.89
USE1YGL098W GAL10P04397 699 aa3.26□□□□□ -1.89
USE1YGL098W MET17P06106 444 aa3.26□□□□□ -1.89
USE1YGL098W GCR1P07261 785 aa3.26□□□□□ -1.89
USE1YGL098W NUC1P08466 329 aa3.26□□□□□ -1.89
USE1YGL098W NFT1P0CE68 1218 aa3.26□□□□□ -1.89
USE1YGL098W TOP3P13099 656 aa3.26□□□□□ -1.89
USE1YGL098W STE12P13574 688 aa3.26□□□□□ -1.89
USE1YGL098W HAP4P14064 554 aa3.26□□□□□ -1.89
USE1YGL098W ABF1P14164 731 aa3.26□□□□□ -1.89
USE1YGL098W NCP1P16603 691 aaKnown RBP3.26□□□□□ -1.89
USE1YGL098W HEM15P16622 393 aa3.26□□□□□ -1.89
USE1YGL098W PTP2P29461 750 aa3.26□□□□□ -1.89
USE1YGL098W CAM1P29547 415 aaKnown RBP3.26□□□□□ -1.89
USE1YGL098W FUN30P31380 1131 aa3.26□□□□□ -1.89
USE1YGL098W RRN6P32786 894 aa3.26□□□□□ -1.89
USE1YGL098W TYE7P33122 291 aaPredicted RBP3.26□□□□□ -1.89
USE1YGL098W MCM7P38132 845 aa3.26□□□□□ -1.89
USE1YGL098W MAL31P38156 614 aa3.26□□□□□ -1.89
USE1YGL098W RXT2P38255 430 aa3.26□□□□□ -1.89
USE1YGL098W POP4P38336 279 aa3.26□□□□□ -1.89
USE1YGL098W YBR259WP38338 688 aa3.26□□□□□ -1.89
USE1YGL098W MSG5P38590 489 aa3.26□□□□□ -1.89
USE1YGL098W RIM11P38615 370 aa3.26□□□□□ -1.89
USE1YGL098W HIS2P38635 335 aa3.26□□□□□ -1.89
USE1YGL098W RTC3P38804 111 aaPredicted RBP3.26□□□□□ -1.89
USE1YGL098W RRP8P38961 392 aaKnown RBP3.26□□□□□ -1.89
USE1YGL098W END3P39013 349 aa3.26□□□□□ -1.89
USE1YGL098W CCT3P39077 534 aaKnown RBP3.26□□□□□ -1.89
USE1YGL098W EDC3P39998 551 aaKnown RBP3.26□□□□□ -1.89
USE1YGL098W MEP1P40260 492 aa3.26□□□□□ -1.89
USE1YGL098W DOT5P40553 215 aa3.26□□□□□ -1.89
USE1YGL098W HXT9P40885 567 aa3.26□□□□□ -1.89
USE1YGL098W RTS2P40962 232 aa3.26□□□□□ -1.89
USE1YGL098W YGR210CP42942 411 aa3.26□□□□□ -1.89
USE1YGL098W CCT7P42943 550 aaKnown RBP3.26□□□□□ -1.89
USE1YGL098W BST1P43571 1029 aa3.26□□□□□ -1.89
USE1YGL098W SAD1P43589 448 aa3.26□□□□□ -1.89
USE1YGL098W YFR018CP43599 363 aa3.26□□□□□ -1.89
USE1YGL098W AIM23P47015 356 aa3.26□□□□□ -1.89
USE1YGL098W YJR141WP47172 347 aaPredicted RBP3.26□□□□□ -1.89
USE1YGL098W BPL1P48445 690 aaPredicted RBP3.26□□□□□ -1.89
USE1YGL098W SAP4P53036 818 aa3.26□□□□□ -1.89
USE1YGL098W RAI1P53063 387 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms