RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C VPS8P39702 1274 aa2.44□□□□□ -2.02
PRE4YFR050C YEL020CP39994 560 aa2.44□□□□□ -2.02
PRE4YFR050C MAM1P40065 302 aa2.44□□□□□ -2.02
PRE4YFR050C KHA1P40309 873 aa2.44□□□□□ -2.02
PRE4YFR050C BTT1P40314 149 aaPredicted RBP2.44□□□□□ -2.02
PRE4YFR050C PEX14P53112 341 aa2.44□□□□□ -2.02
PRE4YFR050C NOP15P53927 220 aaPredicted RBP2.44□□□□□ -2.02
PRE4YFR050C YML122CQ03207 126 aa2.44□□□□□ -2.02
PRE4YFR050C YPS7Q06325 596 aa2.44□□□□□ -2.02
PRE4YFR050C YDL057WQ07379 328 aa2.44□□□□□ -2.02
PRE4YFR050C HIF1Q12373 385 aa2.44□□□□□ -2.02
PRE4YFR050C RAD61Q99359 647 aa2.44□□□□□ -2.02
PRE4YFR050C GLN4P13188 809 aaKnown RBP2.43□□□□□ -2.02
PRE4YFR050C STE12P13574 688 aa2.43□□□□□ -2.02
PRE4YFR050C ADY2P25613 283 aa2.43□□□□□ -2.02
PRE4YFR050C TMT1P32643 299 aa2.43□□□□□ -2.02
PRE4YFR050C SEC6P32844 805 aa2.43□□□□□ -2.02
PRE4YFR050C NFU1P32860 256 aa2.43□□□□□ -2.02
PRE4YFR050C YPT53P36019 220 aa2.43□□□□□ -2.02
PRE4YFR050C ELF1P36053 145 aa2.43□□□□□ -2.02
PRE4YFR050C MUP3P38734 546 aa2.43□□□□□ -2.02
PRE4YFR050C YHR097CP38809 366 aaKnown RBP2.43□□□□□ -2.02
PRE4YFR050C OAF1P39720 1047 aaPredicted RBP2.43□□□□□ -2.02
PRE4YFR050C CCT5P40413 562 aaKnown RBP2.43□□□□□ -2.02
PRE4YFR050C PMT6P42934 759 aa2.43□□□□□ -2.02
PRE4YFR050C MNN11P46985 422 aaKnown RBP2.43□□□□□ -2.02
PRE4YFR050C DIP5P53388 608 aa2.43□□□□□ -2.02
PRE4YFR050C FOL1P53848 824 aa2.43□□□□□ -2.02
PRE4YFR050C ECM9Q02202 377 aa2.43□□□□□ -2.02
PRE4YFR050C UFO1Q04511 668 aa2.43□□□□□ -2.02
PRE4YFR050C RKI1Q12189 258 aa2.43□□□□□ -2.02
PRE4YFR050C RPS21BQ3E754 87 aaKnown RBP2.43□□□□□ -2.02
PRE4YFR050C NUC1P08466 329 aa2.42□□□□□ -2.02
PRE4YFR050C HEM12P32347 362 aaPredicted RBP2.42□□□□□ -2.02
PRE4YFR050C EMP70P32802 667 aa2.42□□□□□ -2.02
PRE4YFR050C SKG6P32900 734 aaPredicted RBP2.42□□□□□ -2.02
PRE4YFR050C TFC3P34111 1160 aa2.42□□□□□ -2.02
PRE4YFR050C AAP1P37898 856 aaKnown RBP2.42□□□□□ -2.02
PRE4YFR050C YBR056WP38081 501 aa2.42□□□□□ -2.02
PRE4YFR050C YHR033WP38690 423 aa2.42□□□□□ -2.02
PRE4YFR050C HEM14P40012 539 aa2.42□□□□□ -2.02
PRE4YFR050C YER186CP40101 306 aa2.42□□□□□ -2.02
PRE4YFR050C DSN1P40568 576 aa2.42□□□□□ -2.02
PRE4YFR050C BUD8P41698 603 aa2.42□□□□□ -2.02
PRE4YFR050C THI6P41835 540 aa2.42□□□□□ -2.02
PRE4YFR050C SCD6P45978 349 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02 RIP-Chip
PRE4YFR050C TAF4P50105 388 aa2.42□□□□□ -2.02
PRE4YFR050C IMO32P53219 342 aa2.42□□□□□ -2.02
PRE4YFR050C NGL2Q03264 515 aaKnown RBP2.42□□□□□ -2.02
PRE4YFR050C VID22Q05934 901 aa2.42□□□□□ -2.02
PRE4YFR050C ARO10Q06408 635 aa2.42□□□□□ -2.02
PRE4YFR050C SDH5Q08230 162 aa2.42□□□□□ -2.02
PRE4YFR050C HRT3Q12347 344 aa2.42□□□□□ -2.02
PRE4YFR050C STT4P37297 1900 aa2.41□□□□□ -2.02
PRE4YFR050C IME1P21190 360 aa2.41□□□□□ -2.02
PRE4YFR050C OAF3P36023 863 aa2.41□□□□□ -2.02
PRE4YFR050C MRPL40P36534 297 aa2.41□□□□□ -2.02
PRE4YFR050C SOL2P37262 315 aa2.41□□□□□ -2.02
PRE4YFR050C HXT6P39003 570 aaKnown RBP2.41□□□□□ -2.02
PRE4YFR050C HXT7P39004 570 aa2.41□□□□□ -2.02
PRE4YFR050C TMN3P40071 706 aa2.41□□□□□ -2.02
PRE4YFR050C GPP1P41277 250 aaKnown RBP2.41□□□□□ -2.02
PRE4YFR050C VTC2P43585 828 aa2.41□□□□□ -2.02
PRE4YFR050C ATG36P46983 293 aa2.41□□□□□ -2.02
PRE4YFR050C AIM23P47015 356 aa2.41□□□□□ -2.02
PRE4YFR050C ENP2P48234 707 aaKnown RBP2.41□□□□□ -2.02
PRE4YFR050C TRF5P48561 642 aaKnown RBP2.41□□□□□ -2.02
PRE4YFR050C RNR4P49723 345 aaKnown RBP2.41□□□□□ -2.02
PRE4YFR050C GPG1P53130 126 aa2.41□□□□□ -2.02
PRE4YFR050C NNF2P53253 936 aa2.41□□□□□ -2.02
PRE4YFR050C RRP46P53256 223 aaPredicted RBP2.41□□□□□ -2.02
PRE4YFR050C DOS2P54858 310 aa2.41□□□□□ -2.02
PRE4YFR050C PEX25Q02969 394 aa2.41□□□□□ -2.02
PRE4YFR050C YMR018WQ04364 514 aa2.41□□□□□ -2.02
PRE4YFR050C STP4Q07351 490 aa2.41□□□□□ -2.02
PRE4YFR050C BSC6Q08280 497 aa2.41□□□□□ -2.02
PRE4YFR050C SLK19Q08581 821 aaKnown RBP2.41□□□□□ -2.02
PRE4YFR050C RSA1Q08932 381 aa2.41□□□□□ -2.02
PRE4YFR050C AIM41Q12032 185 aa2.41□□□□□ -2.02
PRE4YFR050C HFI1Q12060 488 aa2.41□□□□□ -2.02
PRE4YFR050C RPS21AP0C0V8 87 aaKnown RBP2.4□□□□□ -2.03
PRE4YFR050C GRR1P24814 1151 aa2.4□□□□□ -2.03
PRE4YFR050C SAT4P25333 603 aaKnown RBP2.4□□□□□ -2.03
PRE4YFR050C DGR2P32330 852 aa2.4□□□□□ -2.03
PRE4YFR050C MSS1P32559 526 aaPredicted RBP2.4□□□□□ -2.03
PRE4YFR050C ORC2P32833 620 aa2.4□□□□□ -2.03
PRE4YFR050C YPT7P32939 208 aa2.4□□□□□ -2.03
PRE4YFR050C PMC1P38929 1173 aaPredicted RBP2.4□□□□□ -2.03
PRE4YFR050C TIM17P39515 158 aa2.4□□□□□ -2.03
PRE4YFR050C VPS25P47142 202 aa2.4□□□□□ -2.03
PRE4YFR050C MRK1P50873 501 aa2.4□□□□□ -2.03
PRE4YFR050C MFM1Q02783 413 aa2.4□□□□□ -2.03
PRE4YFR050C YDR541CQ03049 344 aa2.4□□□□□ -2.03
PRE4YFR050C YDR179W-AQ03983 463 aa2.4□□□□□ -2.03
PRE4YFR050C AAD4Q07747 329 aa2.4□□□□□ -2.03
PRE4YFR050C RTT109Q07794 436 aa2.4□□□□□ -2.03
PRE4YFR050C IZH3Q07959 543 aa2.4□□□□□ -2.03
PRE4YFR050C YPR027CQ12079 277 aa2.4□□□□□ -2.03
PRE4YFR050C RMP1Q12530 201 aa2.4□□□□□ -2.03
PRE4YFR050C YNL162W-AQ3E7A8 72 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms