RNA–Protein interactions for RNA: YDR225W

HTA1, Transcript of Histone H2A, yeast

Gene HTA1, Length 399 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTA1	YDR225W	AAP1	P37898	856 aa	Known RBP	3.42	□□□□□ -1.86
HTA1	YDR225W	PPS1	P38148	807 aa		3.42	□□□□□ -1.86
HTA1	YDR225W	OTU2	P38747	307 aa	Known RBP	3.42	□□□□□ -1.86
HTA1	YDR225W	MTG2	P38860	518 aa		3.42	□□□□□ -1.86
HTA1	YDR225W	SEC31	P38968	1273 aa	Known RBP	3.42	□□□□□ -1.86
HTA1	YDR225W	AFG3	P39925	761 aa		3.42	□□□□□ -1.86
HTA1	YDR225W	MAF1	P41910	395 aa		3.42	□□□□□ -1.86
HTA1	YDR225W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.42	□□□□□ -1.86	not detected
HTA1	YDR225W	IRC8	P47046	822 aa		3.42	□□□□□ -1.86
HTA1	YDR225W	PET130	P47065	347 aa		3.42	□□□□□ -1.86
HTA1	YDR225W	VID30	P53076	958 aa		3.42	□□□□□ -1.86
HTA1	YDR225W	TWF1	P53250	332 aa		3.42	□□□□□ -1.86
HTA1	YDR225W	ADE16	P54113	591 aa	Known RBP	3.42	□□□□□ -1.86
HTA1	YDR225W	RPC11	Q04307	110 aa	Predicted RBP	3.42	□□□□□ -1.86
HTA1	YDR225W	GYL1	Q04322	720 aa		3.42	□□□□□ -1.86
HTA1	YDR225W	YDL073W	Q07454	984 aa		3.42	□□□□□ -1.86
HTA1	YDR225W	LUC7	Q07508	261 aa	Predicted RBP	3.42	□□□□□ -1.86
HTA1	YDR225W	CRT10	Q08226	957 aa		3.42	□□□□□ -1.86
HTA1	YDR225W	SMF3	Q12078	473 aa	Predicted RBP	3.42	□□□□□ -1.86
HTA1	YDR225W	LCB4	Q12246	624 aa		3.42	□□□□□ -1.86
HTA1	YDR225W	ISN1	Q99312	450 aa		3.42	□□□□□ -1.86
HTA1	YDR225W	Q0010	Q9ZZX9	128 aa		3.42	□□□□□ -1.86
HTA1	YDR225W	MF(ALPHA)1	P01149	165 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	PPR1	P07272	904 aa	Predicted RBP	3.41	□□□□□ -1.86
HTA1	YDR225W	PCT1	P13259	424 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	CPR2	P23285	205 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	HRR25	P29295	494 aa	Known RBP	3.41	□□□□□ -1.86
HTA1	YDR225W	PUP2	P32379	260 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	GDA1	P32621	518 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	MRE11	P32829	692 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	WBP1	P33767	430 aa	Known RBP	3.41	□□□□□ -1.86
HTA1	YDR225W	TIF3	P34167	436 aa	Known RBP	3.41	□□□□□ -1.86
HTA1	YDR225W	CMC1	P36064	111 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	TCD2	P36101	447 aa	Known RBP	3.41	□□□□□ -1.86
HTA1	YDR225W	MNN2	P38069	597 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	VBA2	P38358	474 aa	Known RBP	3.41	□□□□□ -1.86
HTA1	YDR225W	PIH1	P38768	344 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	PES4	P39684	611 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	YJL055W	P47044	245 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	RPS7B	P48164	190 aa	Known RBP	3.41	□□□□□ -1.86
HTA1	YDR225W	TCB2	P48231	1178 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	PHO23	P50947	330 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	BOP3	P53958	396 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	RPA49	Q01080	415 aa	Predicted RBP	3.41	□□□□□ -1.86
HTA1	YDR225W	RSM28	Q03430	361 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	ARX1	Q03862	593 aa	Known RBP	3.41	□□□□□ -1.86
HTA1	YDR225W	ARG7	Q04728	441 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	ROY1	Q04847	553 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	YML053C	Q04978	212 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	FMP45	Q07651	309 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	YLR040C	Q07988	224 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	AIM39	Q08223	395 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	FMP40	Q08968	688 aa	Predicted RBP	3.41	□□□□□ -1.86
HTA1	YDR225W	NTO1	Q12311	748 aa		3.41	□□□□□ -1.86
HTA1	YDR225W	WHI2	P12611	486 aa		3.4	□□□□□ -1.87
HTA1	YDR225W	PDA1	P16387	420 aa	Known RBP	3.4	□□□□□ -1.87
HTA1	YDR225W	ADH7	P25377	361 aa		3.4	□□□□□ -1.87
HTA1	YDR225W	AAD3	P25612	363 aa		3.4	□□□□□ -1.87
HTA1	YDR225W	MGM1	P32266	881 aa		3.4	□□□□□ -1.87
HTA1	YDR225W	SSE2	P32590	693 aa	Known RBP	3.4	□□□□□ -1.87
HTA1	YDR225W	SEC66	P33754	206 aa		3.4	□□□□□ -1.87
HTA1	YDR225W	SEF1	P34228	1148 aa		3.4	□□□□□ -1.87
HTA1	YDR225W	GMH1	P36125	273 aa		3.4	□□□□□ -1.87
HTA1	YDR225W	DIA4	P38705	446 aa	Predicted RBP	3.4	□□□□□ -1.87
HTA1	YDR225W	PHM8	P40025	321 aa		3.4	□□□□□ -1.87
HTA1	YDR225W	ARG2	P40360	574 aa		3.4	□□□□□ -1.87
HTA1	YDR225W	NDC80	P40460	691 aa		3.4	□□□□□ -1.87
HTA1	YDR225W	VMA13	P41807	478 aa	Known RBP	3.4	□□□□□ -1.87
HTA1	YDR225W	RPN11	P43588	306 aa	Known RBP	3.4	□□□□□ -1.87
HTA1	YDR225W	DLD2	P46681	530 aa	Known RBP	3.4	□□□□□ -1.87
HTA1	YDR225W	MAK10	Q02197	733 aa		3.4	□□□□□ -1.87
HTA1	YDR225W	YPL191C	Q08930	360 aa		3.4	□□□□□ -1.87
HTA1	YDR225W	GPM3	Q12326	303 aa		3.4	□□□□□ -1.87
HTA1	YDR225W	AFI1	Q99222	893 aa		3.4	□□□□□ -1.87
HTA1	YDR225W	HXK2	P04807	486 aa	Known RBP	3.39	□□□□□ -1.87
HTA1	YDR225W	MRP13	P12686	339 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	KGD1	P20967	1014 aa	Known RBP	3.39	□□□□□ -1.87
HTA1	YDR225W	RNR3	P21672	869 aa	Known RBP	3.39	□□□□□ -1.87
HTA1	YDR225W	RRP43	P25359	394 aa	Predicted RBP	3.39	□□□□□ -1.87
HTA1	YDR225W	PRD1	P25375	712 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	BUD14	P27637	709 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	RPN2	P32565	945 aa	Known RBP	3.39	□□□□□ -1.87
HTA1	YDR225W	SOF1	P33750	489 aa	Known RBP	3.39	□□□□□ -1.87
HTA1	YDR225W	YBR144C	P34215	104 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	LHS1	P36016	881 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	SUL1	P38359	859 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	POP2	P39008	433 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	GIP4	P39732	760 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	SAP1	P39955	897 aa	Known RBP	3.39	□□□□□ -1.87
HTA1	YDR225W	MRX1	P40050	688 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	ALG5	P40350	334 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	HXT14	P42833	540 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	PMT6	P42934	759 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	IMD4	P50094	524 aa	Known RBP	3.39	□□□□□ -1.87
HTA1	YDR225W	DIA3	P52290	468 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	COG2	P53271	262 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	COQ6	P53318	479 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	IST1	P53843	298 aa	Predicted RBP	3.39	□□□□□ -1.87
HTA1	YDR225W	EFM6	P53970	246 aa		3.39	□□□□□ -1.87
HTA1	YDR225W	SMX3	P54999	86 aa	Predicted RBP	3.39	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms