RNA–Protein interactions for RNA: YBR204C

LDH1, Transcript of Serine hydrolase, yeast

Gene LDH1, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDH1	YBR204C	PKP1	P40530	394 aa		4.27	□□□□□ -1.73
LDH1	YBR204C	CFD1	P40558	293 aa		4.27	□□□□□ -1.73
LDH1	YBR204C	YFR020W	P43600	232 aa		4.27	□□□□□ -1.73
LDH1	YBR204C	ENT1	Q12518	454 aa		4.27	□□□□□ -1.73
LDH1	YBR204C	YER145C-A	A0A023PYF4	145 aa		4.26	□□□□□ -1.73
LDH1	YBR204C	CHO1	P08456	276 aa		4.26	□□□□□ -1.73
LDH1	YBR204C	AAC3	P18238	307 aa		4.26	□□□□□ -1.73
LDH1	YBR204C	CNA1	P23287	553 aa		4.26	□□□□□ -1.73
LDH1	YBR204C	SAC6	P32599	642 aa	Known RBP	4.26	□□□□□ -1.73
LDH1	YBR204C	PXL1	P36166	706 aa		4.26	□□□□□ -1.73
LDH1	YBR204C	YIL024C	P40543	189 aa		4.26	□□□□□ -1.73
LDH1	YBR204C	VTC3	Q02725	835 aa		4.26	□□□□□ -1.73
LDH1	YBR204C	PFA5	Q03289	374 aa		4.26	□□□□□ -1.73
LDH1	YBR204C	ATG9	Q12142	997 aa		4.26	□□□□□ -1.73
LDH1	YBR204C	RRI1	Q12468	440 aa		4.26	□□□□□ -1.73
LDH1	YBR204C	STE50	P25344	346 aa		4.25	□□□□□ -1.73
LDH1	YBR204C	DIA4	P38705	446 aa	Predicted RBP	4.25	□□□□□ -1.73
LDH1	YBR204C	RTS1	P38903	757 aa		4.25	□□□□□ -1.73
LDH1	YBR204C	VPS41	P38959	992 aa		4.25	□□□□□ -1.73
LDH1	YBR204C	UIP3	P39547	235 aa		4.25	□□□□□ -1.73
LDH1	YBR204C	JHD1	P40034	492 aa		4.25	□□□□□ -1.73
LDH1	YBR204C	DPB11	P47027	764 aa	Predicted RBP	4.25	□□□□□ -1.73
LDH1	YBR204C	DUO1	P53168	247 aa	Known RBP	4.25	□□□□□ -1.73
LDH1	YBR204C	SWF1	Q04629	336 aa		4.25	□□□□□ -1.73
LDH1	YBR204C	PSR1	Q07800	427 aa		4.25	□□□□□ -1.73
LDH1	YBR204C	YBR126W-A	Q8TGU7	68 aa		4.25	□□□□□ -1.73
LDH1	YBR204C	RAP1	P11938	827 aa		4.24	□□□□□ -1.73
LDH1	YBR204C	HSC82	P15108	705 aa	Known RBP	4.24	□□□□□ -1.73
LDH1	YBR204C	TKL1	P23254	680 aa	Known RBP	4.24	□□□□□ -1.73
LDH1	YBR204C	SAC1	P32368	623 aa	Known RBP	4.24	□□□□□ -1.73
LDH1	YBR204C	ECM32	P32644	1121 aa	Known RBP	4.24	□□□□□ -1.73
LDH1	YBR204C	MAL33	P38157	468 aa		4.24	□□□□□ -1.73
LDH1	YBR204C	YBL029W	P38201	376 aa		4.24	□□□□□ -1.73
LDH1	YBR204C	TOM71	P38825	639 aa	Known RBP	4.24	□□□□□ -1.73
LDH1	YBR204C	MEP2	P41948	499 aa		4.24	□□□□□ -1.73
LDH1	YBR204C	UBP8	P50102	471 aa		4.24	□□□□□ -1.73
LDH1	YBR204C	IMH1	Q06704	911 aa	Known RBP	4.24	□□□□□ -1.73
LDH1	YBR204C	FRE3	Q08905	711 aa		4.24	□□□□□ -1.73
LDH1	YBR204C	TCO89	Q08921	799 aa		4.24	□□□□□ -1.73
LDH1	YBR204C	HUA2	Q12134	243 aa		4.24	□□□□□ -1.73
LDH1	YBR204C	INP53	Q12271	1107 aa		4.24	□□□□□ -1.73
LDH1	YBR204C	KAR3	P17119	729 aa		4.23	□□□□□ -1.73
LDH1	YBR204C	PWP1	P21304	576 aa	Known RBP	4.23	□□□□□ -1.73
LDH1	YBR204C	YCK1	P23291	538 aa		4.23	□□□□□ -1.73
LDH1	YBR204C	CLB2	P24869	491 aa		4.23	□□□□□ -1.73
LDH1	YBR204C	SNU114	P36048	1008 aa	Known RBP	4.23	□□□□□ -1.73
LDH1	YBR204C	AGP2	P38090	596 aa		4.23	□□□□□ -1.73
LDH1	YBR204C	SMC3	P47037	1230 aa		4.23	□□□□□ -1.73
LDH1	YBR204C	LYS4	P49367	693 aa	Predicted RBP	4.23	□□□□□ -1.73
LDH1	YBR204C	ASI1	P54074	624 aa		4.23	□□□□□ -1.73
LDH1	YBR204C	NOP58	Q12499	511 aa	Known RBP	4.23	□□□□□ -1.73
LDH1	YBR204C	YER190C-B	P0CX94	160 aa		4.22	□□□□□ -1.73
LDH1	YBR204C	YEL077W-A	P0CX95	160 aa		4.22	□□□□□ -1.73
LDH1	YBR204C	YGR296C-B	P0CX96	160 aa		4.22	□□□□□ -1.73
LDH1	YBR204C	YPL283W-B	P0CX97	160 aa		4.22	□□□□□ -1.73
LDH1	YBR204C	YPR204C-A	P0CX98	160 aa		4.22	□□□□□ -1.73
LDH1	YBR204C	VMA16	P23968	213 aa		4.22	□□□□□ -1.73
LDH1	YBR204C	AUR1	P36107	401 aa	Predicted RBP	4.22	□□□□□ -1.73
LDH1	YBR204C	NOP4	P37838	685 aa	Known RBP	4.22	□□□□□ -1.73
LDH1	YBR204C	BUR6	P40096	142 aa		4.22	□□□□□ -1.73
LDH1	YBR204C	IRC8	P47046	822 aa		4.22	□□□□□ -1.73
LDH1	YBR204C	RPS7B	P48164	190 aa	Known RBP	4.22	□□□□□ -1.73
LDH1	YBR204C	STR3	P53101	465 aa	Known RBP	4.22	□□□□□ -1.73
LDH1	YBR204C	YNL144C	P53907	740 aa		4.22	□□□□□ -1.73
LDH1	YBR204C	YMR178W	Q03219	274 aa	Known RBP	4.22	□□□□□ -1.73
LDH1	YBR204C	ECM22	Q05958	814 aa	Predicted RBP	4.22	□□□□□ -1.73
LDH1	YBR204C	COG4	Q06096	861 aa		4.22	□□□□□ -1.73
LDH1	YBR204C	YOL159C	Q08300	171 aa		4.22	□□□□□ -1.73
LDH1	YBR204C	YPL272C	Q08984	517 aa		4.22	□□□□□ -1.73
LDH1	YBR204C	MED1	Q12321	566 aa		4.22	□□□□□ -1.73
LDH1	YBR204C	KRS1	P15180	591 aa	Known RBP	4.21	□□□□□ -1.74
LDH1	YBR204C	OLE1	P21147	510 aa	Known RBP	4.21	□□□□□ -1.74
LDH1	YBR204C	ADH7	P25377	361 aa		4.21	□□□□□ -1.74
LDH1	YBR204C	RPN12	P32496	274 aa		4.21	□□□□□ -1.74
LDH1	YBR204C	YKL050C	P35736	922 aa		4.21	□□□□□ -1.74
LDH1	YBR204C	SPC97	P38863	823 aa		4.21	□□□□□ -1.74
LDH1	YBR204C	FLC2	P39719	783 aa		4.21	□□□□□ -1.74
LDH1	YBR204C	DIA3	P52290	468 aa		4.21	□□□□□ -1.74
LDH1	YBR204C	NNF2	P53253	936 aa		4.21	□□□□□ -1.74
LDH1	YBR204C	YTP1	P53584	459 aa		4.21	□□□□□ -1.74
LDH1	YBR204C	NGL3	Q03210	505 aa		4.21	□□□□□ -1.74
LDH1	YBR204C	CAC2	Q04199	468 aa		4.21	□□□□□ -1.74
LDH1	YBR204C	NMD4	Q12129	218 aa		4.21	□□□□□ -1.74
LDH1	YBR204C	SEC53	P07283	254 aa	Known RBP	4.2	□□□□□ -1.74
LDH1	YBR204C	SGF29	P25554	259 aa		4.2	□□□□□ -1.74
LDH1	YBR204C	MNN2	P38069	597 aa		4.2	□□□□□ -1.74
LDH1	YBR204C	FLO5	P38894	1075 aa		4.2	□□□□□ -1.74
LDH1	YBR204C	YMR124W	P39523	943 aa	Known RBP	4.2	□□□□□ -1.74
LDH1	YBR204C	YPT11	P48559	417 aa		4.2	□□□□□ -1.74
LDH1	YBR204C	SCW4	P53334	386 aa	Known RBP	4.2	□□□□□ -1.74
LDH1	YBR204C	RPL15B	P54780	204 aa	Predicted RBP	4.2	□□□□□ -1.74
LDH1	YBR204C	ZDS2	P54786	942 aa		4.2	□□□□□ -1.74
LDH1	YBR204C	APL4	Q12028	832 aa		4.2	□□□□□ -1.74
LDH1	YBR204C	ATX2	Q12067	313 aa		4.2	□□□□□ -1.74
LDH1	YBR204C	SPE4	Q12455	300 aa		4.2	□□□□□ -1.74
LDH1	YBR204C	YPR089W	O13585	888 aa		4.19	□□□□□ -1.74
LDH1	YBR204C	ARD1	P07347	238 aa	Predicted RBP	4.19	□□□□□ -1.74
LDH1	YBR204C	MET8	P15807	274 aa		4.19	□□□□□ -1.74
LDH1	YBR204C	SPE2	P21182	396 aa		4.19	□□□□□ -1.74
LDH1	YBR204C	AIM17	P23180	465 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms