RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CFAP45Q9UL16 551 aa20.31■□□□□ 0.84
PHGDH-232ENST00000641947 DDNO94850 711 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-232ENST00000641947 HIRAP54198 1017 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-232ENST00000641947 ZNF543Q08ER8 600 aa20.3■□□□□ 0.84
PHGDH-232ENST00000641947 CSPP1Q1MSJ5 1256 aa20.3■□□□□ 0.84
PHGDH-232ENST00000641947 ZNF396Q96N95 335 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-232ENST00000641947 LZTS2Q9BRK4 669 aa20.3■□□□□ 0.84
PHGDH-232ENST00000641947 RCOR1Q9UKL0 485 aa20.3■□□□□ 0.84
PHGDH-232ENST00000641947 A0A1W2PRG0 241 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 TNNI2P48788 182 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 GSE1Q14687 1217 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 ASPRV1Q53RT3 343 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 WWC2Q6AWC2 1192 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 TTBK2Q6IQ55 1244 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 NOSTRINQ8IVI9 506 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 FOXP1Q9H334 677 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-232ENST00000641947 GPCPD1Q9NPB8 672 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 RTEL1Q9NZ71 1219 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 DOCK1Q14185 1865 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 FAM205CA6NFA0 338 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 H7C1D1 291 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 NOM1Q5C9Z4 860 aaKnown RBP20.29■□□□□ 0.84
PHGDH-232ENST00000641947 EARS2Q5JPH6 523 aaKnown RBP20.29■□□□□ 0.84
PHGDH-232ENST00000641947 C9orf131Q5VYM1 1079 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 ATL3Q6DD88 541 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 RIOX1Q9H6W3 641 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 ZBTB21Q9ULJ3 1066 aa20.29■□□□□ 0.84
PHGDH-232ENST00000641947 GNL2Q13823 731 aaKnown RBP20.28■□□□□ 0.84
PHGDH-232ENST00000641947 TNFAIP1Q13829 316 aa20.28■□□□□ 0.84
PHGDH-232ENST00000641947 SAFBQ15424 915 aaKnown RBP eCLIP20.28■□□□□ 0.84
PHGDH-232ENST00000641947 ANGEL2Q5VTE6 544 aaKnown RBP20.28■□□□□ 0.84
PHGDH-232ENST00000641947 KCTD1Q719H9 257 aa20.28■□□□□ 0.84
PHGDH-232ENST00000641947 TNFRSF25Q93038 417 aa20.28■□□□□ 0.84
PHGDH-232ENST00000641947 DEFB129Q9H1M3 183 aa20.28■□□□□ 0.84
PHGDH-232ENST00000641947 PHF20L1A8MW92 1017 aa20.27■□□□□ 0.84
PHGDH-232ENST00000641947 SMARCA1P28370 1054 aa20.27■□□□□ 0.84
PHGDH-232ENST00000641947 NASPP49321 788 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-232ENST00000641947 TOB1P50616 345 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-232ENST00000641947 PPP4R3BQ5MIZ7 849 aa20.27■□□□□ 0.84
PHGDH-232ENST00000641947 LINC00301Q8NCQ3 95 aa20.27■□□□□ 0.84
PHGDH-232ENST00000641947 PIGSQ96S52 555 aa20.27■□□□□ 0.84
PHGDH-232ENST00000641947 CABP5Q9NP86 173 aa20.27■□□□□ 0.84
PHGDH-232ENST00000641947 POLR3EQ9NVU0 708 aa20.27■□□□□ 0.84
PHGDH-232ENST00000641947 STXBP3O00186 592 aa20.26■□□□□ 0.83
PHGDH-232ENST00000641947 XBP1P17861 261 aa20.26■□□□□ 0.83
PHGDH-232ENST00000641947 ECE1P42892 770 aa20.26■□□□□ 0.83
PHGDH-232ENST00000641947 HOMER1Q86YM7 354 aa20.26■□□□□ 0.83
PHGDH-232ENST00000641947 ACER1Q8TDN7 264 aa20.26■□□□□ 0.83
PHGDH-232ENST00000641947 VAT1LQ9HCJ6 419 aa20.26■□□□□ 0.83
PHGDH-232ENST00000641947 KRT2P35908 639 aa20.26■□□□□ 0.83
PHGDH-232ENST00000641947 CAP2P40123 477 aa20.26■□□□□ 0.83
PHGDH-232ENST00000641947 ANO1Q5XXA6 986 aa20.26■□□□□ 0.83
PHGDH-232ENST00000641947 SLFN13Q68D06 897 aa20.26■□□□□ 0.83
PHGDH-232ENST00000641947 LIG1P18858 919 aa20.25■□□□□ 0.83
PHGDH-232ENST00000641947 SLC16A2P36021 539 aa20.25■□□□□ 0.83
PHGDH-232ENST00000641947 CCDC96Q2M329 555 aa20.25■□□□□ 0.83
PHGDH-232ENST00000641947 ZSCAN23Q3MJ62 389 aa20.25■□□□□ 0.83
PHGDH-232ENST00000641947 KIAA1755Q5JYT7 1200 aa20.25■□□□□ 0.83
PHGDH-232ENST00000641947 NBPF12Q5TAG4 269 aaPredicted RBP20.25■□□□□ 0.83
PHGDH-232ENST00000641947 HEATR3Q7Z4Q2 680 aa20.25■□□□□ 0.83
PHGDH-232ENST00000641947 CCDC84Q86UT8 332 aaPredicted RBP20.25■□□□□ 0.83
PHGDH-232ENST00000641947 GMCL1P1Q8NEA9 526 aa20.25■□□□□ 0.83
PHGDH-232ENST00000641947 NUP88Q99567 741 aaPredicted RBP20.25■□□□□ 0.83
PHGDH-232ENST00000641947 BARHL2Q9NY43 387 aa20.25■□□□□ 0.83
PHGDH-232ENST00000641947 GGA3Q9NZ52 723 aa20.25■□□□□ 0.83
PHGDH-232ENST00000641947 SSC5DA1L4H1 1573 aa20.25■□□□□ 0.83
PHGDH-232ENST00000641947 PHIPQ8WWQ0 1821 aa20.24■□□□□ 0.83
PHGDH-232ENST00000641947 SMCHD1A6NHR9 2005 aa20.24■□□□□ 0.83
PHGDH-232ENST00000641947 F5H6K3 240 aa20.24■□□□□ 0.83
PHGDH-232ENST00000641947 RAD21O60216 631 aa20.24■□□□□ 0.83
PHGDH-232ENST00000641947 YEATS4O95619 227 aa20.24■□□□□ 0.83
PHGDH-232ENST00000641947 NDUFB10O96000 172 aa20.24■□□□□ 0.83
PHGDH-232ENST00000641947 KLRC3Q07444 240 aa20.24■□□□□ 0.83
PHGDH-232ENST00000641947 PTPAQ15257 358 aa20.24■□□□□ 0.83
PHGDH-232ENST00000641947 SF3A1Q15459 793 aaKnown RBP20.24■□□□□ 0.83
PHGDH-232ENST00000641947 PRAMEF18Q5VWM3 479 aa20.24■□□□□ 0.83
PHGDH-232ENST00000641947 ADGRF4Q8IZF3 695 aa20.24■□□□□ 0.83
PHGDH-232ENST00000641947 DCAF4Q8WV16 495 aa20.24■□□□□ 0.83
PHGDH-232ENST00000641947 RRP36Q96EU6 259 aaKnown RBP20.24■□□□□ 0.83
PHGDH-232ENST00000641947 JMJD4Q9H9V9 463 aa20.24■□□□□ 0.83
PHGDH-232ENST00000641947 SH3GLB2Q9NR46 395 aa20.24■□□□□ 0.83
PHGDH-232ENST00000641947 WNT7AO00755 349 aa20.23■□□□□ 0.83
PHGDH-232ENST00000641947 NLRP5P59047 1200 aa20.23■□□□□ 0.83
PHGDH-232ENST00000641947 GPATCH4Q5T3I0 446 aaKnown RBP20.23■□□□□ 0.83
PHGDH-232ENST00000641947 GLIS2Q9BZE0 524 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-232ENST00000641947 PPP1R11O60927 126 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-232ENST00000641947 STK38Q15208 465 aa20.23■□□□□ 0.83
PHGDH-232ENST00000641947 PCDHA7Q9UN72 937 aa20.23■□□□□ 0.83
PHGDH-232ENST00000641947 PAPPA2Q9BXP8 1791 aa20.22■□□□□ 0.83
PHGDH-232ENST00000641947 USP17L10C9JJH3 530 aa20.22■□□□□ 0.83
PHGDH-232ENST00000641947 M0R2N6 131 aa20.22■□□□□ 0.83
PHGDH-232ENST00000641947 SLC1A4P43007 532 aa20.22■□□□□ 0.83
PHGDH-232ENST00000641947 APOBEC3FQ8IUX4 373 aaKnown RBP20.22■□□□□ 0.83
PHGDH-232ENST00000641947 GMCL1Q96IK5 515 aa20.22■□□□□ 0.83
PHGDH-232ENST00000641947 SPTLC2O15270 562 aa20.21■□□□□ 0.83
PHGDH-232ENST00000641947 SLC39A14Q15043 492 aa20.21■□□□□ 0.83
PHGDH-232ENST00000641947 RASGRP4Q8TDF6 673 aa20.21■□□□□ 0.83
PHGDH-232ENST00000641947 MTMR8Q96EF0 704 aa20.21■□□□□ 0.83
PHGDH-232ENST00000641947 GOLPH3LQ9H4A5 285 aa20.21■□□□□ 0.83
PHGDH-232ENST00000641947 PCDHA4Q9UN74 947 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms