RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 KLRF2D3W0D1 207 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 ZNF500O60304 480 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-219ENST00000641513 SCG2P13521 617 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 EEF2P13639 858 aaKnown RBP10.19□□□□□ -0.78
PHGDH-219ENST00000641513 KRT2P35908 639 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 NLRP5P59047 1200 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 ZNF280AP59817 542 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-219ENST00000641513 FUT2Q10981 343 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 TNFAIP1Q13829 316 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 SEPT2Q15019 361 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 PKN1Q16512 942 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 KIF4BQ2VIQ3 1234 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 FKBP1CQ5VVH2 108 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 MYSM1Q5VVJ2 828 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 TMEM179Q6ZVK1 233 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 MIGA2Q7L4E1 593 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 DIS3L2Q8IYB7 885 aaKnown RBP10.19□□□□□ -0.78
PHGDH-219ENST00000641513 BICD2Q8TD16 824 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 DPF2Q92785 391 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 USP28Q96RU2 1077 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 FTOQ9C0B1 505 aaKnown RBP eCLIP10.19□□□□□ -0.78
PHGDH-219ENST00000641513 KANSL2Q9H9L4 492 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 CCDC39Q9UFE4 941 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 NOL7Q9UMY1 257 aaKnown RBP10.19□□□□□ -0.78
PHGDH-219ENST00000641513 DOCK1Q14185 1865 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 BTBD18B2RXH4 712 aa10.18□□□□□ -0.78
PHGDH-219ENST00000641513 EGFRP00533 1210 aa10.18□□□□□ -0.78
PHGDH-219ENST00000641513 GH2P01242 217 aa10.18□□□□□ -0.78
PHGDH-219ENST00000641513 PDHBP11177 359 aa10.18□□□□□ -0.78
PHGDH-219ENST00000641513 ICA1Q05084 483 aa10.18□□□□□ -0.78
PHGDH-219ENST00000641513 RASA3Q14644 834 aa10.18□□□□□ -0.78
PHGDH-219ENST00000641513 PFKFB3Q16875 520 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-219ENST00000641513 SHROOM1Q2M3G4 852 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-219ENST00000641513 ASPRV1Q53RT3 343 aa10.18□□□□□ -0.78
PHGDH-219ENST00000641513 TATDN1Q6P1N9 297 aa10.18□□□□□ -0.78
PHGDH-219ENST00000641513 HEATR3Q7Z4Q2 680 aa10.18□□□□□ -0.78
PHGDH-219ENST00000641513 FAM83AQ86UY5 434 aa10.18□□□□□ -0.78
PHGDH-219ENST00000641513 HOMER1Q86YM7 354 aa10.18□□□□□ -0.78
PHGDH-219ENST00000641513 GPKOWQ92917 476 aaPredicted RBP eCLIP10.18□□□□□ -0.78
PHGDH-219ENST00000641513 RRP36Q96EU6 259 aaKnown RBP10.18□□□□□ -0.78
PHGDH-219ENST00000641513 ZBED3Q96IU2 234 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-219ENST00000641513 UBA5Q9GZZ9 404 aa10.18□□□□□ -0.78
PHGDH-219ENST00000641513 CPVLQ9H3G5 476 aa10.18□□□□□ -0.78
PHGDH-219ENST00000641513 RNF181Q9P0P0 153 aa10.18□□□□□ -0.78
PHGDH-219ENST00000641513 SEC63Q9UGP8 760 aaKnown RBP10.18□□□□□ -0.78
PHGDH-219ENST00000641513 CLIC4Q9Y696 253 aa10.18□□□□□ -0.78
PHGDH-219ENST00000641513 ATP2B1P20020 1258 aa10.17□□□□□ -0.78
PHGDH-219ENST00000641513 ME1P48163 572 aa10.17□□□□□ -0.78
PHGDH-219ENST00000641513 NOVP48745 357 aa10.17□□□□□ -0.78
PHGDH-219ENST00000641513 ANO1Q5XXA6 986 aa10.17□□□□□ -0.78
PHGDH-219ENST00000641513 SLFN13Q68D06 897 aa10.17□□□□□ -0.78
PHGDH-219ENST00000641513 METTL16Q86W50 562 aaKnown RBP10.17□□□□□ -0.78
PHGDH-219ENST00000641513 NOSTRINQ8IVI9 506 aa10.17□□□□□ -0.78
PHGDH-219ENST00000641513 PHF20Q9BVI0 1012 aa10.17□□□□□ -0.78
PHGDH-219ENST00000641513 FOXP1Q9H334 677 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-219ENST00000641513 RTEL1Q9NZ71 1219 aa10.17□□□□□ -0.78
PHGDH-219ENST00000641513 NYAP2Q9P242 653 aa10.17□□□□□ -0.78
PHGDH-219ENST00000641513 HACL1Q9UJ83 578 aa10.17□□□□□ -0.78
PHGDH-219ENST00000641513 RCOR1Q9UKL0 485 aa10.17□□□□□ -0.78
PHGDH-219ENST00000641513 ASTN2O75129 1339 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-219ENST00000641513 CAVIN2O95810 425 aa10.16□□□□□ -0.78
PHGDH-219ENST00000641513 YBX3P16989 372 aaKnown RBP eCLIP10.16□□□□□ -0.782e-7■□□□□ 10.4
PHGDH-219ENST00000641513 MSNP26038 577 aaKnown RBP10.16□□□□□ -0.78
PHGDH-219ENST00000641513 U2AF2P26368 475 aaKnown RBP eCLIP10.16□□□□□ -0.78
PHGDH-219ENST00000641513 CALML3P27482 149 aa10.16□□□□□ -0.78
PHGDH-219ENST00000641513 LMOD1P29536 600 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-219ENST00000641513 ZNF543Q08ER8 600 aa10.16□□□□□ -0.78
PHGDH-219ENST00000641513 NR5A1Q13285 461 aa10.16□□□□□ -0.78
PHGDH-219ENST00000641513 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-219ENST00000641513 KCTD1Q719H9 257 aa10.16□□□□□ -0.78
PHGDH-219ENST00000641513 CDAN1Q8IWY9 1227 aa10.16□□□□□ -0.78
PHGDH-219ENST00000641513 GPC2Q8N158 579 aa10.16□□□□□ -0.78
PHGDH-219ENST00000641513 CCDC148Q8NFR7 591 aa10.16□□□□□ -0.78
PHGDH-219ENST00000641513 OXER1Q8TDS5 423 aa10.16□□□□□ -0.78
PHGDH-219ENST00000641513 FUCA2Q9BTY2 467 aa10.16□□□□□ -0.78
PHGDH-219ENST00000641513 SPZ1Q9BXG8 430 aa10.16□□□□□ -0.78
PHGDH-219ENST00000641513 ARHGEF10LQ9HCE6 1279 aa10.16□□□□□ -0.78
PHGDH-219ENST00000641513 ZKSCAN5Q9Y2L8 839 aa10.16□□□□□ -0.78
PHGDH-219ENST00000641513 GOLGB1Q14789 3259 aaKnown RBP10.16□□□□□ -0.78
PHGDH-219ENST00000641513 SPTLC2O15270 562 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 CYTH3O43739 400 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 OFD1O75665 1012 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 YEATS4O95619 227 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 TPM3P06753 285 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 SLC1A4P43007 532 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 NAPAP54920 295 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 JAG1P78504 1218 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 IKQ13123 557 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-219ENST00000641513 RRP1BQ14684 758 aaKnown RBP10.15□□□□□ -0.78
PHGDH-219ENST00000641513 GPR162Q16538 588 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 GPATCH4Q5T3I0 446 aaKnown RBP10.15□□□□□ -0.78
PHGDH-219ENST00000641513 C9orf131Q5VYM1 1079 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 WWC2Q6AWC2 1192 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 TTBK2Q6IQ55 1244 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 RBM43Q6ZSC3 357 aaKnown RBP10.15□□□□□ -0.78
PHGDH-219ENST00000641513 APOBEC3FQ8IUX4 373 aaKnown RBP10.15□□□□□ -0.78
PHGDH-219ENST00000641513 CCAR1Q8IX12 1150 aaKnown RBP10.15□□□□□ -0.78
PHGDH-219ENST00000641513 KCNG4Q8TDN1 519 aa10.15□□□□□ -0.78
PHGDH-219ENST00000641513 CCDC12Q8WUD4 166 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-219ENST00000641513 DCAF4Q8WV16 495 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms