RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 SPDL1Q96EA4 605 aa10.16□□□□□ -0.78
PAX6-259ENST00000639916 NYXQ9GZU5 481 aa10.16□□□□□ -0.78
PAX6-259ENST00000639916 NAT10Q9H0A0 1025 aaKnown RBP10.16□□□□□ -0.78
PAX6-259ENST00000639916 PUF60Q9UHX1 559 aaKnown RBP10.16□□□□□ -0.78
PAX6-259ENST00000639916 SAMM50Q9Y512 469 aa10.16□□□□□ -0.78
PAX6-259ENST00000639916 ARAP2Q8WZ64 1704 aa10.15□□□□□ -0.78
PAX6-259ENST00000639916 SHTN1A0MZ66 631 aa10.15□□□□□ -0.78
PAX6-259ENST00000639916 RASSF9O75901 435 aa10.15□□□□□ -0.78
PAX6-259ENST00000639916 ANTXR2P58335 489 aa10.15□□□□□ -0.78
PAX6-259ENST00000639916 RCSD1Q6JBY9 416 aa10.15□□□□□ -0.78
PAX6-259ENST00000639916 FCHSD1Q86WN1 690 aa10.15□□□□□ -0.78
PAX6-259ENST00000639916 C3orf20Q8ND61 904 aa10.15□□□□□ -0.78
PAX6-259ENST00000639916 SPDYE1Q8NFV5 336 aaPredicted RBP10.15□□□□□ -0.78
PAX6-259ENST00000639916 CELF1Q92879 486 aaKnown RBP10.15□□□□□ -0.78
PAX6-259ENST00000639916 ARHGEF1Q92888 912 aaKnown RBP10.15□□□□□ -0.78
PAX6-259ENST00000639916 FBXW7Q969H0 707 aa10.15□□□□□ -0.78
PAX6-259ENST00000639916 NLRP3Q96P20 1036 aa10.15□□□□□ -0.78
PAX6-259ENST00000639916 LRP2BPQ9P2M1 347 aa10.15□□□□□ -0.78
PAX6-259ENST00000639916 MINPP1Q9UNW1 487 aa10.15□□□□□ -0.78
PAX6-259ENST00000639916 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.15□□□□□ -0.78
PAX6-259ENST00000639916 BTAF1O14981 1849 aa10.15□□□□□ -0.78
PAX6-259ENST00000639916 LAMB2P55268 1798 aa10.15□□□□□ -0.78
PAX6-259ENST00000639916 COL4A1P02462 1669 aa10.15□□□□□ -0.78
PAX6-259ENST00000639916 ENO4A6NNW6 628 aa10.15□□□□□ -0.79
PAX6-259ENST00000639916 MBD4O95243 580 aa10.15□□□□□ -0.79
PAX6-259ENST00000639916 GYG1P46976 350 aa10.15□□□□□ -0.79
PAX6-259ENST00000639916 SMTNP53814 917 aa10.15□□□□□ -0.79
PAX6-259ENST00000639916 SLC8A3P57103 927 aa10.15□□□□□ -0.79
PAX6-259ENST00000639916 TPTE2Q6XPS3 522 aa10.15□□□□□ -0.79
PAX6-259ENST00000639916 AMIGO3Q86WK7 504 aa10.15□□□□□ -0.79
PAX6-259ENST00000639916 CCDC24Q8N4L8 307 aa10.15□□□□□ -0.79
PAX6-259ENST00000639916 ARMT1Q9H993 441 aa10.15□□□□□ -0.79
PAX6-259ENST00000639916 DENND2AQ9ULE3 1009 aa10.15□□□□□ -0.79
PAX6-259ENST00000639916 GRIN2DO15399 1336 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 PYGLP06737 847 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 RHOXF2BP0C7M4 288 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 FOSBP53539 338 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 KCNB1Q14721 858 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 NFXL1Q6ZNB6 911 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 TBC1D10CQ8IV04 446 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 RPUSD2Q8IZ73 545 aaKnown RBP10.14□□□□□ -0.79
PAX6-259ENST00000639916 IFNL3Q8IZI9 196 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 MAB21L3Q8N8X9 362 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 RIN2Q8WYP3 895 aaPredicted RBP10.14□□□□□ -0.79
PAX6-259ENST00000639916 SAAL1Q96ER3 474 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 RHOXF2Q9BQY4 288 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 IRX2Q9BZI1 471 aaPredicted RBP10.14□□□□□ -0.79
PAX6-259ENST00000639916 GBP3Q9H0R5 595 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 VIPAS39Q9H9C1 493 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 ATP6V0A4Q9HBG4 840 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 TAF1P21675 1872 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 AFF2P51816 1311 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 KLF18A0A0U1RQI7 1052 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 EIF3HO15372 352 aaKnown RBP eCLIP10.14□□□□□ -0.79
PAX6-259ENST00000639916 MEFVO15553 781 aaPredicted RBP10.14□□□□□ -0.79
PAX6-259ENST00000639916 KIAA0754O94854 1291 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 PRPHP41219 470 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 NAP1L1P55209 391 aaKnown RBP10.14□□□□□ -0.79
PAX6-259ENST00000639916 UBE4AQ14139 1066 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 CCDC12Q8WUD4 166 aaPredicted RBP10.14□□□□□ -0.79
PAX6-259ENST00000639916 LMBR1Q8WVP7 490 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 CENPHQ9H3R5 247 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 ABCF2Q9UG63 623 aa10.14□□□□□ -0.79
PAX6-259ENST00000639916 THSD7AQ9UPZ6 1657 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 PDHBP11177 359 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 EZRP15311 586 aaKnown RBP10.13□□□□□ -0.79
PAX6-259ENST00000639916 RPS8P62241 208 aaKnown RBP10.13□□□□□ -0.79
PAX6-259ENST00000639916 GOLGA8FQ08AF8 430 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 GOLGA8DPQ0D2H9 430 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 ALX1Q15699 326 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 CCDC40Q4G0X9 1142 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 CAVIN4Q5BKX8 364 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 VPS37DQ86XT2 251 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 FAM76AQ8TAV0 307 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 NAPBQ9H115 298 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 WDR19Q8NEZ3 1342 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 SALL1Q9NSC2 1324 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 ZC3H4Q9UPT8 1303 aaKnown RBP10.13□□□□□ -0.79
PAX6-259ENST00000639916 GOLGA6L9A6NEM1 432 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 GOLGA8BA8MQT2 603 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 PRKAB2O43741 272 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 PPFIA2O75334 1257 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 ZNF202O95125 648 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 RFC4P35249 363 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 RESTQ13127 1097 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 MYSM1Q5VVJ2 828 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 NAA16Q6N069 864 aaPredicted RBP10.13□□□□□ -0.79
PAX6-259ENST00000639916 DNAJC14Q6Y2X3 702 aaPredicted RBP10.13□□□□□ -0.79
PAX6-259ENST00000639916 FAM228AQ86W67 206 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 RAB11FIP4Q86YS3 637 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 TMEM139Q8IV31 216 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 SEPT12Q8IYM1 358 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 LCORLQ8N3X6 602 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 MIGA1Q8NAN2 632 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 NKX2-3Q8TAU0 364 aa10.13□□□□□ -0.79
PAX6-259ENST00000639916 EPB41L4AQ9HCS5 686 aaPredicted RBP10.13□□□□□ -0.79
PAX6-259ENST00000639916 ZNF804BA4D1E1 1349 aa10.12□□□□□ -0.79
PAX6-259ENST00000639916 GSG1L2A8MUP6 293 aa10.12□□□□□ -0.79
PAX6-259ENST00000639916 B4E1Z4 1266 aa10.12□□□□□ -0.79
PAX6-259ENST00000639916 ARHGAP6O43182 974 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms