RNA–Protein interactions for RNA: ENST00000638417.1

MYCN-202, Transcript of MYCN proto-oncogene, bHLH transcription factor, humanhuman

TSL 2 BASIC

Gene MYCN, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCN-202ENST00000638417 CEP95Q96GE4 821 aa17.75■□□□□ 0.43
MYCN-202ENST00000638417 ERO1AQ96HE7 468 aa17.75■□□□□ 0.43
MYCN-202ENST00000638417 CCDC17Q96LX7 622 aa17.75■□□□□ 0.43
MYCN-202ENST00000638417 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.75■□□□□ 0.43
MYCN-202ENST00000638417 HTTP42858 3142 aa17.75■□□□□ 0.43
MYCN-202ENST00000638417 PTPDC1A2A3K4 754 aa17.74■□□□□ 0.43
MYCN-202ENST00000638417 ECM2O94769 699 aaPredicted RBP17.74■□□□□ 0.43
MYCN-202ENST00000638417 NUCB2P80303 420 aa17.74■□□□□ 0.43
MYCN-202ENST00000638417 CAP1Q01518 475 aa17.74■□□□□ 0.43
MYCN-202ENST00000638417 PKP1Q13835 747 aa17.74■□□□□ 0.43
MYCN-202ENST00000638417 RTN1Q16799 776 aa17.74■□□□□ 0.43
MYCN-202ENST00000638417 ANKS1AQ92625 1134 aa17.74■□□□□ 0.43
MYCN-202ENST00000638417 HERC5Q9UII4 1024 aaKnown RBP17.74■□□□□ 0.43
MYCN-202ENST00000638417 TAOK2Q9UL54 1235 aa17.74■□□□□ 0.43
MYCN-202ENST00000638417 PHF20L1A8MW92 1017 aa17.74■□□□□ 0.43
MYCN-202ENST00000638417 TATDN1Q6P1N9 297 aa17.74■□□□□ 0.43
MYCN-202ENST00000638417 FANCBQ8NB91 859 aa17.74■□□□□ 0.43
MYCN-202ENST00000638417 FAM217BQ9NTX9 383 aaPredicted RBP17.74■□□□□ 0.43
MYCN-202ENST00000638417 SIPA1L1O43166 1804 aa17.73■□□□□ 0.43
MYCN-202ENST00000638417 NOL9Q5SY16 702 aaKnown RBP17.73■□□□□ 0.43
MYCN-202ENST00000638417 CPLX2Q6PUV4 134 aaKnown RBP17.73■□□□□ 0.43
MYCN-202ENST00000638417 FAM184AQ8NB25 1140 aa17.73■□□□□ 0.43
MYCN-202ENST00000638417 SMARCC2Q8TAQ2 1214 aa17.73■□□□□ 0.43
MYCN-202ENST00000638417 TMEM47Q9BQJ4 181 aa17.73■□□□□ 0.43
MYCN-202ENST00000638417 EFCC1Q9HA90 598 aa17.73■□□□□ 0.43
MYCN-202ENST00000638417 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.73■□□□□ 0.43
MYCN-202ENST00000638417 MTMR7Q9Y216 660 aa17.73■□□□□ 0.43
MYCN-202ENST00000638417 DDAH1O94760 285 aa17.72■□□□□ 0.43
MYCN-202ENST00000638417 GDF11O95390 407 aa17.72■□□□□ 0.43
MYCN-202ENST00000638417 CALM1P0DP23 149 aa17.72■□□□□ 0.43
MYCN-202ENST00000638417 CALM2P0DP24 149 aa17.72■□□□□ 0.43
MYCN-202ENST00000638417 CALM3P0DP25 149 aa17.72■□□□□ 0.43
MYCN-202ENST00000638417 RCAN1P53805 252 aa17.72■□□□□ 0.43
MYCN-202ENST00000638417 TROAPQ12815 778 aa17.72■□□□□ 0.43
MYCN-202ENST00000638417 FOXD4L5Q5VV16 416 aaPredicted RBP17.72■□□□□ 0.43
MYCN-202ENST00000638417 LARP1BQ659C4 914 aaKnown RBP17.72■□□□□ 0.43
MYCN-202ENST00000638417 CLEC10AQ8IUN9 316 aa17.72■□□□□ 0.43
MYCN-202ENST00000638417 SCYL3Q8IZE3 742 aa17.72■□□□□ 0.43
MYCN-202ENST00000638417 PNMA1Q8ND90 353 aa17.72■□□□□ 0.43
MYCN-202ENST00000638417 FOXD4L4Q8WXT5 416 aaPredicted RBP17.72■□□□□ 0.43
MYCN-202ENST00000638417 PICK1Q9NRD5 415 aa17.72■□□□□ 0.43
MYCN-202ENST00000638417 MTMR4Q9NYA4 1195 aa17.72■□□□□ 0.43
MYCN-202ENST00000638417 PLIN4Q96Q06 1357 aa17.72■□□□□ 0.43
MYCN-202ENST00000638417 IGKV6D-41A0A0C4DH26 115 aa17.71■□□□□ 0.43
MYCN-202ENST00000638417 CCDC196A0A1B0GTZ2 297 aa17.71■□□□□ 0.43
MYCN-202ENST00000638417 SYT1P21579 422 aa17.71■□□□□ 0.43
MYCN-202ENST00000638417 HMGN5P82970 282 aaKnown RBP17.71■□□□□ 0.43
MYCN-202ENST00000638417 ATP2B2Q01814 1243 aa17.71■□□□□ 0.43
MYCN-202ENST00000638417 RAB3GAP1Q15042 981 aa17.71■□□□□ 0.43
MYCN-202ENST00000638417 ABCB5Q2M3G0 1257 aa17.71■□□□□ 0.43
MYCN-202ENST00000638417 SHROOM1Q2M3G4 852 aaPredicted RBP17.71■□□□□ 0.43
MYCN-202ENST00000638417 KCNH4Q9UQ05 1017 aa17.71■□□□□ 0.43
MYCN-202ENST00000638417 ZHX2Q9Y6X8 837 aa17.71■□□□□ 0.43
MYCN-202ENST00000638417 TBC1D12O60347 775 aa17.71■□□□□ 0.42
MYCN-202ENST00000638417 CDKL5O76039 1030 aa17.71■□□□□ 0.42
MYCN-202ENST00000638417 TOP1P11387 765 aaKnown RBP17.71■□□□□ 0.42
MYCN-202ENST00000638417 RRP1BQ14684 758 aaKnown RBP17.71■□□□□ 0.42
MYCN-202ENST00000638417 CCDC84Q86UT8 332 aaPredicted RBP17.71■□□□□ 0.42
MYCN-202ENST00000638417 CMTR1Q8N1G2 835 aaKnown RBP17.71■□□□□ 0.42
MYCN-202ENST00000638417 CCDC82Q8N4S0 544 aa17.71■□□□□ 0.42
MYCN-202ENST00000638417 CLIP2Q9UDT6 1046 aa17.71■□□□□ 0.42
MYCN-202ENST00000638417 MYH8P13535 1937 aa17.7■□□□□ 0.42
MYCN-202ENST00000638417 ZSWIM8A7E2V4 1837 aa17.7■□□□□ 0.42
MYCN-202ENST00000638417 PDHXO00330 501 aa17.7■□□□□ 0.42
MYCN-202ENST00000638417 STX6O43752 255 aa17.7■□□□□ 0.42
MYCN-202ENST00000638417 TLR2O60603 784 aa17.7■□□□□ 0.42
MYCN-202ENST00000638417 TTLL1O95922 423 aa17.7■□□□□ 0.42
MYCN-202ENST00000638417 PTPRAP18433 802 aa17.7■□□□□ 0.42
MYCN-202ENST00000638417 PPP2R5BQ15173 497 aa17.7■□□□□ 0.42
MYCN-202ENST00000638417 CTCFLQ8NI51 663 aaPredicted RBP17.7■□□□□ 0.42
MYCN-202ENST00000638417 PHKBQ93100 1093 aa17.7■□□□□ 0.42
MYCN-202ENST00000638417 CABP5Q9NP86 173 aa17.7■□□□□ 0.42
MYCN-202ENST00000638417 ORC3Q9UBD5 711 aaPredicted RBP17.7■□□□□ 0.42
MYCN-202ENST00000638417 PTPN22Q9Y2R2 807 aa17.7■□□□□ 0.42
MYCN-202ENST00000638417 ZDHHC9Q9Y397 364 aa17.7■□□□□ 0.42
MYCN-202ENST00000638417 DOCK1Q14185 1865 aa17.69■□□□□ 0.42
MYCN-202ENST00000638417 GH2P01242 217 aa17.69■□□□□ 0.42
MYCN-202ENST00000638417 FDPSP14324 419 aaKnown RBP17.69■□□□□ 0.42
MYCN-202ENST00000638417 PDCP20941 246 aa17.69■□□□□ 0.42
MYCN-202ENST00000638417 NOVP48745 357 aa17.69■□□□□ 0.42
MYCN-202ENST00000638417 FOSBP53539 338 aa17.69■□□□□ 0.42
MYCN-202ENST00000638417 JAG1P78504 1218 aa17.69■□□□□ 0.42
MYCN-202ENST00000638417 SEPT2Q15019 361 aa17.69■□□□□ 0.42
MYCN-202ENST00000638417 NTRK3Q16288 839 aa17.69■□□□□ 0.42
MYCN-202ENST00000638417 TMEM179Q6ZVK1 233 aa17.69■□□□□ 0.42
MYCN-202ENST00000638417 ARHGAP39Q9C0H5 1083 aa17.69■□□□□ 0.42
MYCN-202ENST00000638417 RBM28Q9NW13 759 aaKnown RBP17.69■□□□□ 0.42
MYCN-202ENST00000638417 CPA4Q9UI42 421 aa17.69■□□□□ 0.42
MYCN-202ENST00000638417 KIF3AQ9Y496 699 aa17.69■□□□□ 0.42
MYCN-202ENST00000638417 NID2Q14112 1375 aa17.69■□□□□ 0.42
MYCN-202ENST00000638417 BRCA2P51587 3418 aa17.69■□□□□ 0.42
MYCN-202ENST00000638417 BRD1O95696 1058 aa17.68■□□□□ 0.42
MYCN-202ENST00000638417 MAP3K10Q02779 954 aa17.68■□□□□ 0.42
MYCN-202ENST00000638417 MOGSQ13724 837 aa17.68■□□□□ 0.42
MYCN-202ENST00000638417 ANKRD23Q86SG2 305 aa17.68■□□□□ 0.42
MYCN-202ENST00000638417 LRRC47Q8N1G4 583 aaKnown RBP17.68■□□□□ 0.42
MYCN-202ENST00000638417 TNPO1Q92973 898 aaKnown RBP17.68■□□□□ 0.42
MYCN-202ENST00000638417 SLC26A6Q9BXS9 759 aa17.68■□□□□ 0.42
MYCN-202ENST00000638417 KANSL2Q9H9L4 492 aa17.68■□□□□ 0.42
MYCN-202ENST00000638417 ZCCHC17Q9NP64 241 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms