RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 A0A087WWV3 80 aa24.89■■□□□ 1.57
CHRNA7-228ENST00000637519 GDF11O95390 407 aa24.89■■□□□ 1.57
CHRNA7-228ENST00000637519 CCDC192P0DO97 292 aa24.89■■□□□ 1.57
CHRNA7-228ENST00000637519 DLGAP5Q15398 846 aa24.88■■□□□ 1.57
CHRNA7-228ENST00000637519 PIK3AP1Q6ZUJ8 805 aa24.88■■□□□ 1.57
CHRNA7-228ENST00000637519 OGFOD1Q8N543 542 aa24.88■■□□□ 1.57
CHRNA7-228ENST00000637519 UPF1Q92900 1129 aaKnown RBP eCLIP24.88■■□□□ 1.57
CHRNA7-228ENST00000637519 TRIM34Q9BYJ4 488 aa24.88■■□□□ 1.57
CHRNA7-228ENST00000637519 GREB1LQ9C091 1923 aaPredicted RBP24.88■■□□□ 1.57
CHRNA7-228ENST00000637519 PTGER2P43116 358 aa24.87■■□□□ 1.57
CHRNA7-228ENST00000637519 CERKLQ49MI3 558 aaPredicted RBP24.87■■□□□ 1.57
CHRNA7-228ENST00000637519 GPCPD1Q9NPB8 672 aa24.87■■□□□ 1.57
CHRNA7-228ENST00000637519 RASSF7Q02833 373 aa24.87■■□□□ 1.57
CHRNA7-228ENST00000637519 CDAN1Q8IWY9 1227 aa24.87■■□□□ 1.57
CHRNA7-228ENST00000637519 JMYQ8N9B5 988 aa24.87■■□□□ 1.57
CHRNA7-228ENST00000637519 CSRNP1Q96S65 589 aa24.87■■□□□ 1.57
CHRNA7-228ENST00000637519 SPZ1Q9BXG8 430 aa24.87■■□□□ 1.57
CHRNA7-228ENST00000637519 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.87■■□□□ 1.57
CHRNA7-228ENST00000637519 ZNF70Q9UC06 446 aaPredicted RBP24.87■■□□□ 1.57
CHRNA7-228ENST00000637519 HDAC9Q9UKV0 1011 aa24.87■■□□□ 1.57
CHRNA7-228ENST00000637519 FER1L6Q2WGJ9 1857 aa24.87■■□□□ 1.57
CHRNA7-228ENST00000637519 STXBP3O00186 592 aa24.86■■□□□ 1.57
CHRNA7-228ENST00000637519 ENTPD3O75355 529 aa24.86■■□□□ 1.57
CHRNA7-228ENST00000637519 NPM3O75607 178 aaKnown RBP24.86■■□□□ 1.57
CHRNA7-228ENST00000637519 CMA1P23946 247 aa24.86■■□□□ 1.57
CHRNA7-228ENST00000637519 JAG1P78504 1218 aa24.86■■□□□ 1.57
CHRNA7-228ENST00000637519 NLGN2Q8NFZ4 835 aa24.86■■□□□ 1.57
CHRNA7-228ENST00000637519 PIGSQ96S52 555 aa24.86■■□□□ 1.57
CHRNA7-228ENST00000637519 VEZTQ9HBM0 779 aa24.86■■□□□ 1.57
CHRNA7-228ENST00000637519 SCAF8Q9UPN6 1271 aaKnown RBP24.86■■□□□ 1.57
CHRNA7-228ENST00000637519 ATRNL1Q5VV63 1379 aa24.86■■□□□ 1.57
CHRNA7-228ENST00000637519 RRP1BQ14684 758 aaKnown RBP24.85■■□□□ 1.57
CHRNA7-228ENST00000637519 LZTS2Q9BRK4 669 aa24.85■■□□□ 1.57
CHRNA7-228ENST00000637519 FBXO2Q9UK22 296 aaPredicted RBP24.85■■□□□ 1.57
CHRNA7-228ENST00000637519 RAD21O60216 631 aa24.85■■□□□ 1.57
CHRNA7-228ENST00000637519 VPS33BQ9H267 617 aa24.85■■□□□ 1.57
CHRNA7-228ENST00000637519 TMOD2Q9NZR1 351 aa24.85■■□□□ 1.57
CHRNA7-228ENST00000637519 SNHG28P0DPA3 235 aa24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 SEPT2Q15019 361 aa24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 TTBK2Q6IQ55 1244 aa24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 TATDN1Q6P1N9 297 aa24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 BLIDQ8IZY5 108 aa24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 KRI1Q8N9T8 703 aaKnown RBP24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 CCDC17Q96LX7 622 aa24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 BARHL2Q9NY43 387 aa24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 TRIM75PA6NK02 468 aa24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 ZNF202O95125 648 aa24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 EEF2P13639 858 aaKnown RBP24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 PRELPP51888 382 aa24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 ZNF174Q15697 407 aa24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 ANO6Q4KMQ2 910 aa24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 JDP2Q8WYK2 163 aa24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 PCDHA4Q9UN74 947 aa24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 CNTNAP1P78357 1384 aa24.84■■□□□ 1.57
CHRNA7-228ENST00000637519 RESP18Q5W5W9 173 aa24.83■■□□□ 1.57
CHRNA7-228ENST00000637519 CIAPIN1Q6FI81 312 aa24.83■■□□□ 1.57
CHRNA7-228ENST00000637519 KCTD1Q719H9 257 aa24.83■■□□□ 1.57
CHRNA7-228ENST00000637519 SRCAPQ6ZRS2 3230 aa24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 CUTAO60888 179 aa24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 SPDYE2Q495Y8 402 aa24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 SASS6Q6UVJ0 657 aa24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 FOXP4Q8IVH2 680 aaPredicted RBP24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 ANP32BQ92688 251 aaKnown RBP24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 RRP36Q96EU6 259 aaKnown RBP24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 SDF4Q9BRK5 362 aa24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 SH3GLB2Q9NR46 395 aa24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 HPSEQ9Y251 543 aa24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 CD2APQ9Y5K6 639 aa24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 MYH4Q9Y623 1939 aa24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 SLC16A2P36021 539 aa24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 ZNF543Q08ER8 600 aa24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 CCDC96Q2M329 555 aa24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 NBPF9Q3BBW0 867 aa24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 TTC38Q5R3I4 469 aa24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 AGBL3Q8NEM8 1001 aa24.82■■□□□ 1.56
CHRNA7-228ENST00000637519 PTPREP23469 700 aa24.81■■□□□ 1.56
CHRNA7-228ENST00000637519 CALML3P27482 149 aa24.81■■□□□ 1.56
CHRNA7-228ENST00000637519 NAPAP54920 295 aa24.81■■□□□ 1.56
CHRNA7-228ENST00000637519 CCDC173Q0VFZ6 552 aa24.81■■□□□ 1.56
CHRNA7-228ENST00000637519 ASPRV1Q53RT3 343 aa24.81■■□□□ 1.56
CHRNA7-228ENST00000637519 SIAH1Q8IUQ4 282 aa24.81■■□□□ 1.56
CHRNA7-228ENST00000637519 TMEM39BQ9GZU3 492 aa24.81■■□□□ 1.56
CHRNA7-228ENST00000637519 DNAJC25Q9H1X3 360 aa24.81■■□□□ 1.56
CHRNA7-228ENST00000637519 SEC63Q9UGP8 760 aaKnown RBP24.81■■□□□ 1.56
CHRNA7-228ENST00000637519 NOL7Q9UMY1 257 aaKnown RBP24.81■■□□□ 1.56
CHRNA7-228ENST00000637519 EGFRP00533 1210 aa24.81■■□□□ 1.56
CHRNA7-228ENST00000637519 SYKP43405 635 aa24.81■■□□□ 1.56
CHRNA7-228ENST00000637519 ABCB5Q2M3G0 1257 aa24.81■■□□□ 1.56
CHRNA7-228ENST00000637519 METTL16Q86W50 562 aaKnown RBP24.81■■□□□ 1.56
CHRNA7-228ENST00000637519 RIOX1Q9H6W3 641 aa24.81■■□□□ 1.56
CHRNA7-228ENST00000637519 GH2P01242 217 aa24.8■■□□□ 1.56
CHRNA7-228ENST00000637519 ICA1Q05084 483 aa24.8■■□□□ 1.56
CHRNA7-228ENST00000637519 USP25Q9UHP3 1055 aa24.8■■□□□ 1.56
CHRNA7-228ENST00000637519 M0R2N6 131 aa24.79■■□□□ 1.56
CHRNA7-228ENST00000637519 CTAGE5O15320 804 aa24.79■■□□□ 1.56
CHRNA7-228ENST00000637519 USP49Q70CQ1 688 aa24.79■■□□□ 1.56
CHRNA7-228ENST00000637519 CCDC148Q8NFR7 591 aa24.79■■□□□ 1.56
CHRNA7-228ENST00000637519 PCDHA6Q9UN73 950 aa24.79■■□□□ 1.56
CHRNA7-228ENST00000637519 CEP131Q9UPN4 1083 aa24.79■■□□□ 1.56
CHRNA7-228ENST00000637519 PCDHA8Q9Y5H6 950 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms