RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 TSPY3P0CV98 308 aa10.68□□□□□ -0.7
CACNA1A-242ENST00000637485 TSPY8P0CW00 308 aa10.68□□□□□ -0.7
CACNA1A-242ENST00000637485 RNASE9P60153 205 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-242ENST00000637485 GNPTABQ3T906 1256 aa10.68□□□□□ -0.7
CACNA1A-242ENST00000637485 FAM133BQ5BKY9 247 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-242ENST00000637485 ZNF804AQ7Z570 1209 aa10.68□□□□□ -0.7
CACNA1A-242ENST00000637485 SCYL3Q8IZE3 742 aa10.68□□□□□ -0.7
CACNA1A-242ENST00000637485 TRIML2Q8N7C3 387 aa10.68□□□□□ -0.7
CACNA1A-242ENST00000637485 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.68□□□□□ -0.7
CACNA1A-242ENST00000637485 KIFAP3Q92845 792 aa10.68□□□□□ -0.7
CACNA1A-242ENST00000637485 LMBRD1Q9NUN5 540 aa10.68□□□□□ -0.7
CACNA1A-242ENST00000637485 INTS9Q9NV88 658 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-242ENST00000637485 EPS15L1Q9UBC2 864 aa10.68□□□□□ -0.7
CACNA1A-242ENST00000637485 CCDC151A5D8V7 595 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 CHGBP05060 677 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 RPL13P26373 211 aaKnown RBP10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 PHBP35232 272 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 IL9RQ01113 521 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 RAPGEF1Q13905 1077 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 KRT80Q6KB66 452 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 LRRC8CQ8TDW0 803 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 KDM6BO15054 1643 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 GOLGA8QA0A0J9YX86 632 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 GOLGA8OA6NCC3 632 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 GOLGA8NF8WBI6 632 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 SEC24BO95487 1268 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 KRT10P13645 584 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 ASIC2Q16515 512 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 SLC30A9Q6PML9 568 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 CTAGE3PQ8IX95 158 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 CCDC105Q8IYK2 499 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 LRGUKQ96M69 825 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 FGD4Q96M96 766 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 EFHD1Q9BUP0 239 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 LRRC2Q9BYS8 371 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 ANKRD2Q9GZV1 360 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 DCAF8L1A6NGE4 600 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 WDR46O15213 610 aaKnown RBP10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 TOM1O60784 492 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 TCP1P17987 556 aaKnown RBP10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 TNFAIP3P21580 790 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 KRT9P35527 623 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 CUL3Q13618 768 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 MAP7D3Q8IWC1 876 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 CCDC138Q96M89 665 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 ATG3Q9NT62 314 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 HS2ST1Q7LGA3 356 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 TEX11Q8IYF3 940 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 KIAA2013Q8IYS2 634 aa10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 PACSIN2Q9UNF0 486 aaPredicted RBP10.67□□□□□ -0.7
CACNA1A-242ENST00000637485 TCEANC2Q96MN5 208 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 OSBPL9Q96SU4 736 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 SH2D4AQ9H788 454 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 GEMIN8Q9NWZ8 242 aaKnown RBP10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 PPP2R2CQ9Y2T4 447 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 ABCC4O15439 1325 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 RAP1GDS1P52306 607 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 PAWRQ96IZ0 340 aaKnown RBP10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 AATKQ6ZMQ8 1374 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 SYNRGQ9UMZ2 1314 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 MAGI2Q86UL8 1455 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 EYA2O00167 538 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 KDM1AO60341 852 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 PLCG2P16885 1265 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 CALML3P27482 149 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 MTX1Q13505 466 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 LRRC8AQ8IWT6 810 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 ENAHQ8N8S7 591 aaPredicted RBP10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 CABLES1Q8TDN4 633 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 SLF1Q9BQI6 1058 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 VPS16Q9H269 839 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 SLC52A2Q9HAB3 445 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 USP19O94966 1318 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 ATP7BP35670 1465 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 ERVK-7P63135 1459 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 TRPA1O75762 1119 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 KRT75O95678 551 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 NBPF14Q5TI25 921 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 HEATR3Q7Z4Q2 680 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 CCDC124Q96CT7 223 aaKnown RBP10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 VPS37BQ9H9H4 285 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 CTNND2Q9UQB3 1225 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 TSC22D4Q9Y3Q8 395 aa10.66□□□□□ -0.7
CACNA1A-242ENST00000637485 EPHB4P54760 987 aa10.65□□□□□ -0.7
CACNA1A-242ENST00000637485 TNNI3KQ59H18 835 aa10.65□□□□□ -0.7
CACNA1A-242ENST00000637485 AGTPBP1Q9UPW5 1226 aa10.65□□□□□ -0.7
CACNA1A-242ENST00000637485 FPGT-TNNI3KV9GXZ4 949 aa10.65□□□□□ -0.7
CACNA1A-242ENST00000637485 MCF2LO15068 1137 aa10.65□□□□□ -0.7
CACNA1A-242ENST00000637485 GJC2Q5T442 439 aaPredicted RBP10.65□□□□□ -0.7
CACNA1A-242ENST00000637485 TPTE2Q6XPS3 522 aa10.65□□□□□ -0.7
CACNA1A-242ENST00000637485 FNBP4Q8N3X1 1017 aaPredicted RBP10.65□□□□□ -0.7
CACNA1A-242ENST00000637485 CEP19Q96LK0 163 aa10.65□□□□□ -0.7
CACNA1A-242ENST00000637485 CDC23Q9UJX2 597 aa10.65□□□□□ -0.7
CACNA1A-242ENST00000637485 MLH3Q9UHC1 1453 aa10.65□□□□□ -0.7
CACNA1A-242ENST00000637485 A0A1B0GVL5 298 aa10.65□□□□□ -0.7
CACNA1A-242ENST00000637485 PTPDC1A2A3K4 754 aa10.65□□□□□ -0.7
CACNA1A-242ENST00000637485 RPS6KB1P23443 525 aa10.65□□□□□ -0.7
CACNA1A-242ENST00000637485 PARP10Q53GL7 1025 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms