RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 USP17L18D6R9N7 530 aa18.73■□□□□ 0.59
CLN6-216ENST00000636876 USP17L22D6RA61 530 aa18.73■□□□□ 0.59
CLN6-216ENST00000636876 USP17L17D6RBQ6 530 aa18.73■□□□□ 0.59
CLN6-216ENST00000636876 USP17L19D6RCP7 530 aa18.73■□□□□ 0.59
CLN6-216ENST00000636876 USP17L20D6RJB6 530 aa18.73■□□□□ 0.59
CLN6-216ENST00000636876 HOXA7P31268 230 aaPredicted RBP18.73■□□□□ 0.59
CLN6-216ENST00000636876 FGD1P98174 961 aa18.73■□□□□ 0.59
CLN6-216ENST00000636876 USP17L24Q0WX57 530 aa18.73■□□□□ 0.59
CLN6-216ENST00000636876 FAM83BQ5T0W9 1011 aa18.73■□□□□ 0.59
CLN6-216ENST00000636876 NFXL1Q6ZNB6 911 aa18.73■□□□□ 0.59
CLN6-216ENST00000636876 FBXL16Q8N461 479 aa18.73■□□□□ 0.59
CLN6-216ENST00000636876 AGXT2Q9BYV1 514 aa18.73■□□□□ 0.59
CLN6-216ENST00000636876 PDRG1Q9NUG6 133 aa18.73■□□□□ 0.59
CLN6-216ENST00000636876 CCDC69A6NI79 296 aa18.72■□□□□ 0.59
CLN6-216ENST00000636876 SNHG28P0DPA3 235 aa18.72■□□□□ 0.59
CLN6-216ENST00000636876 PDHBP11177 359 aa18.72■□□□□ 0.59
CLN6-216ENST00000636876 BMP3P12645 472 aa18.72■□□□□ 0.59
CLN6-216ENST00000636876 SLC1A4P43007 532 aa18.72■□□□□ 0.59
CLN6-216ENST00000636876 CATSPERGQ6ZRH7 1159 aa18.72■□□□□ 0.59
CLN6-216ENST00000636876 RASGRP2Q7LDG7 609 aa18.72■□□□□ 0.59
CLN6-216ENST00000636876 CATIPQ7Z7H3 387 aa18.72■□□□□ 0.59
CLN6-216ENST00000636876 CHMP4CQ96CF2 233 aa18.72■□□□□ 0.59
CLN6-216ENST00000636876 TANGO6Q9C0B7 1094 aa18.72■□□□□ 0.59
CLN6-216ENST00000636876 ALDH1A1P00352 501 aa18.71■□□□□ 0.59
CLN6-216ENST00000636876 OSBPP22059 807 aa18.71■□□□□ 0.59
CLN6-216ENST00000636876 IRX3P78415 501 aaPredicted RBP18.71■□□□□ 0.59
CLN6-216ENST00000636876 MAP2K1Q02750 393 aaPredicted RBP18.71■□□□□ 0.59
CLN6-216ENST00000636876 CCDC96Q2M329 555 aa18.71■□□□□ 0.59
CLN6-216ENST00000636876 ZNF654Q8IZM8 581 aa18.71■□□□□ 0.59
CLN6-216ENST00000636876 BRF1Q92994 677 aa18.71■□□□□ 0.59
CLN6-216ENST00000636876 ASCC2Q9H1I8 757 aaPredicted RBP18.71■□□□□ 0.59
CLN6-216ENST00000636876 ALDH8A1Q9H2A2 487 aaPredicted RBP18.71■□□□□ 0.59
CLN6-216ENST00000636876 PNMA3Q9UL41 463 aa18.71■□□□□ 0.59
CLN6-216ENST00000636876 DDAH1O94760 285 aa18.7■□□□□ 0.58
CLN6-216ENST00000636876 NEK4P51957 841 aa18.7■□□□□ 0.58
CLN6-216ENST00000636876 ZNF543Q08ER8 600 aa18.7■□□□□ 0.58
CLN6-216ENST00000636876 TROAPQ12815 778 aa18.7■□□□□ 0.58
CLN6-216ENST00000636876 TOB2Q14106 344 aaPredicted RBP18.7■□□□□ 0.58
CLN6-216ENST00000636876 TAF1CQ15572 869 aaPredicted RBP18.7■□□□□ 0.58
CLN6-216ENST00000636876 APOA5Q6Q788 366 aa18.7■□□□□ 0.58
CLN6-216ENST00000636876 PARK7Q99497 189 aaKnown RBP18.7■□□□□ 0.58
CLN6-216ENST00000636876 ISY1Q9ULR0 285 aaKnown RBP18.7■□□□□ 0.58
CLN6-216ENST00000636876 SLC12A7Q9Y666 1083 aa18.7■□□□□ 0.58
CLN6-216ENST00000636876 KLF18A0A0U1RQI7 1052 aa18.69■□□□□ 0.58
CLN6-216ENST00000636876 APOBRQ0VD83 1088 aa18.69■□□□□ 0.58
CLN6-216ENST00000636876 RABEP1Q15276 862 aa18.69■□□□□ 0.58
CLN6-216ENST00000636876 ASPRV1Q53RT3 343 aa18.69■□□□□ 0.58
CLN6-216ENST00000636876 GPATCH4Q5T3I0 446 aaKnown RBP18.69■□□□□ 0.58
CLN6-216ENST00000636876 SYNE3Q6ZMZ3 975 aa18.69■□□□□ 0.58
CLN6-216ENST00000636876 KCTD1Q719H9 257 aa18.69■□□□□ 0.58
CLN6-216ENST00000636876 MYL10Q9BUA6 226 aa18.69■□□□□ 0.58
CLN6-216ENST00000636876 FBXO28Q9NVF7 368 aa18.69■□□□□ 0.58
CLN6-216ENST00000636876 FEM1BQ9UK73 627 aa18.69■□□□□ 0.58
CLN6-216ENST00000636876 BRPF3Q9ULD4 1205 aa18.69■□□□□ 0.58
CLN6-216ENST00000636876 TMEM232C9JQI7 657 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 CA12O43570 354 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 PLA2G6O60733 806 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 FLOT1O75955 427 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 PARP1P09874 1014 aaKnown RBP18.68■□□□□ 0.58
CLN6-216ENST00000636876 CALM1P0DP23 149 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 CALM2P0DP24 149 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 CALM3P0DP25 149 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 CYP2C8P10632 490 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 COG2Q14746 738 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 GRM4Q14833 912 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 CHURC1Q8WUH1 139 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 MAP3K14Q99558 947 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 P2RX7Q99572 595 aaKnown RBP18.68■□□□□ 0.58
CLN6-216ENST00000636876 GPCPD1Q9NPB8 672 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 RNF186Q9NXI6 227 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 RLFQ13129 1914 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 FRMPD2Q68DX3 1309 aaPredicted RBP18.68■□□□□ 0.58
CLN6-216ENST00000636876 MYPNQ86TC9 1320 aa18.68■□□□□ 0.58
CLN6-216ENST00000636876 TRPA1O75762 1119 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 GOLGA8HP0CJ92 632 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 STAT2P52630 851 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 AK2P54819 239 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 EVCP57679 992 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 HERVK_113P62684 666 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 CRHR2Q13324 411 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 ANKRD1Q15327 319 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 BTNL9Q6UXG8 535 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 FAM160B2Q86V87 743 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 NUP133Q8WUM0 1156 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 SLF1Q9BQI6 1058 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 CFHR5Q9BXR6 569 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 ZFYVE28Q9HCC9 887 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 SAGE1Q9NXZ1 904 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 HOXC10Q9NYD6 342 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 PPP1R9AQ9ULJ8 1098 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 PARP14Q460N5 1801 aa18.67■□□□□ 0.58
CLN6-216ENST00000636876 PALM3A6NDB9 673 aaPredicted RBP18.66■□□□□ 0.58
CLN6-216ENST00000636876 SPDYE16A6NNV3 312 aaPredicted RBP18.66■□□□□ 0.58
CLN6-216ENST00000636876 GOLGA8BA8MQT2 603 aa18.66■□□□□ 0.58
CLN6-216ENST00000636876 ZBTB43O43298 467 aa18.66■□□□□ 0.58
CLN6-216ENST00000636876 DSG3P32926 999 aa18.66■□□□□ 0.58
CLN6-216ENST00000636876 RCAN1P53805 252 aa18.66■□□□□ 0.58
CLN6-216ENST00000636876 IKQ13123 557 aaPredicted RBP18.66■□□□□ 0.58
CLN6-216ENST00000636876 TTBK2Q6IQ55 1244 aa18.66■□□□□ 0.58
CLN6-216ENST00000636876 SAMD1Q6SPF0 538 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms