RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 GPKOWQ92917 476 aaPredicted RBP eCLIP19.68■□□□□ 0.74
CACNA1A-227ENST00000636549 AS3MTQ9HBK9 375 aa19.68■□□□□ 0.74
CACNA1A-227ENST00000636549 PPFIBP2Q8ND30 876 aa19.68■□□□□ 0.74
CACNA1A-227ENST00000636549 N4BP2L2Q92802 583 aaPredicted RBP19.68■□□□□ 0.74
CACNA1A-227ENST00000636549 ABCC11Q96J66 1382 aa19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 LONRF2Q1L5Z9 754 aa19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 TTC38Q5R3I4 469 aa19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 RSRC2Q7L4I2 434 aaKnown RBP19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 IFNLR1Q8IU57 520 aaPredicted RBP19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 C7orf31Q8N865 590 aa19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 NUCB1Q02818 461 aa19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 CCDC68Q9H2F9 335 aa19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 S100BP04271 92 aaPredicted RBP19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 NELFBQ8WX92 580 aa19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 POLR3EQ9NVU0 708 aa19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 SYNJ1O43426 1573 aa19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 U2AF2P26368 475 aaKnown RBP eCLIP19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 TMCO5AQ8N6Q1 288 aa19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 PI4K2BQ8TCG2 481 aa19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 FAM227BQ96M60 508 aa19.67■□□□□ 0.74
CACNA1A-227ENST00000636549 GYG1P46976 350 aa19.66■□□□□ 0.74
CACNA1A-227ENST00000636549 C1orf228Q6PIY5 440 aa19.66■□□□□ 0.74
CACNA1A-227ENST00000636549 ATP8B2P98198 1209 aa19.66■□□□□ 0.74
CACNA1A-227ENST00000636549 GABPB2Q8TAK5 448 aaPredicted RBP19.66■□□□□ 0.74
CACNA1A-227ENST00000636549 AP5M1Q9H0R1 490 aa19.66■□□□□ 0.74
CACNA1A-227ENST00000636549 GPAA1O43292 621 aa19.66■□□□□ 0.74
CACNA1A-227ENST00000636549 YIPF2Q9BWQ6 316 aa19.66■□□□□ 0.74
CACNA1A-227ENST00000636549 DBNDD1Q9H9R9 158 aa19.66■□□□□ 0.74
CACNA1A-227ENST00000636549 HELLSQ9NRZ9 838 aa19.66■□□□□ 0.74
CACNA1A-227ENST00000636549 SMAD1Q15797 465 aaKnown RBP19.66■□□□□ 0.74
CACNA1A-227ENST00000636549 TRIM68Q6AZZ1 485 aa19.66■□□□□ 0.74
CACNA1A-227ENST00000636549 GPBP1Q86WP2 473 aa19.66■□□□□ 0.74
CACNA1A-227ENST00000636549 KCTD17Q8N5Z5 321 aa19.66■□□□□ 0.74
CACNA1A-227ENST00000636549 GOLGA8CPA6NN73 597 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 FMNL1O95466 1100 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 GOLGA8FQ08AF8 430 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 GOLGA8DPQ0D2H9 430 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 RRAGAQ7L523 313 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 NCAPGQ9BPX3 1015 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 G3BP2Q9UN86 482 aaKnown RBP19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 ZNF532Q9HCE3 1301 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 ZNF18P17022 549 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 BLVRAP53004 296 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 DYNLT1P63172 113 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 CYP4A11Q02928 519 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 NAA35Q5VZE5 725 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 SUPT20HQ8NEM7 779 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 KRBA2Q6ZNG9 492 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 NBPF11Q86T75 865 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 ZAP70P43403 619 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 VCX3BQ9H321 246 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 CCPG1Q9ULG6 757 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 TOPBP1Q92547 1522 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 TLR3O15455 904 aaKnown RBP19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 PDE8AO60658 829 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 MMEL1Q495T6 779 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 DBNDD2Q9BQY9 259 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 SUGT1Q9Y2Z0 365 aa19.65■□□□□ 0.74
CACNA1A-227ENST00000636549 RAD17O75943 681 aa19.64■□□□□ 0.74
CACNA1A-227ENST00000636549 KCTD1Q719H9 257 aa19.64■□□□□ 0.74
CACNA1A-227ENST00000636549 SPATA5Q8NB90 893 aa19.64■□□□□ 0.74
CACNA1A-227ENST00000636549 ADPGKQ9BRR6 497 aa19.64■□□□□ 0.74
CACNA1A-227ENST00000636549 SMCO2A6NFE2 343 aa19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 GCP02774 474 aa19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 PLCD1P51178 756 aa19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 DHX32Q7L7V1 743 aaKnown RBP19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 KRT222Q8N1A0 295 aa19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 MRPL50Q8N5N7 158 aaKnown RBP19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 CAPN15O75808 1086 aa19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 GDF11O95390 407 aa19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 ALDH1B1P30837 517 aa19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 ZBTB8OSQ8IWT0 167 aa19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 DENND4BO75064 1496 aaPredicted RBP19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 SPECC1L-ADORA2AF8WAN1 911 aa19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 MYBP10242 640 aa19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 ATP6V1E1P36543 226 aa19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 TTC19Q6DKK2 380 aaPredicted RBP19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 G2E3Q7L622 706 aa19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 CCDC13Q8IYE1 715 aa19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 RAB20Q9NX57 234 aa19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 VSIG1Q86XK7 387 aa19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 C17orf53Q8N3J3 647 aaPredicted RBP19.64■□□□□ 0.73
CACNA1A-227ENST00000636549 RRP9O43818 475 aaKnown RBP19.63■□□□□ 0.73
CACNA1A-227ENST00000636549 ATP5DP30049 168 aa19.63■□□□□ 0.73
CACNA1A-227ENST00000636549 PAK1Q13153 545 aa19.63■□□□□ 0.73
CACNA1A-227ENST00000636549 FANCAO15360 1455 aa19.63■□□□□ 0.73
CACNA1A-227ENST00000636549 CACNB1Q02641 598 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-227ENST00000636549 KLHL30Q0D2K2 578 aa19.63■□□□□ 0.73
CACNA1A-227ENST00000636549 QTRT2Q9H974 415 aaKnown RBP19.63■□□□□ 0.73
CACNA1A-227ENST00000636549 ANLNQ9NQW6 1124 aa19.63■□□□□ 0.73
CACNA1A-227ENST00000636549 SCARA5Q6ZMJ2 495 aa19.63■□□□□ 0.73
CACNA1A-227ENST00000636549 BCRP11274 1271 aa19.63■□□□□ 0.73
CACNA1A-227ENST00000636549 NOP14P78316 857 aaKnown RBP19.63■□□□□ 0.73
CACNA1A-227ENST00000636549 PNOCQ13519 176 aa19.63■□□□□ 0.73
CACNA1A-227ENST00000636549 RFX6Q8HWS3 928 aa19.63■□□□□ 0.73
CACNA1A-227ENST00000636549 RAB3IPQ96QF0 476 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-227ENST00000636549 ORAI2Q96SN7 254 aa19.63■□□□□ 0.73
CACNA1A-227ENST00000636549 TYW5A2RUC4 315 aaKnown RBP19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 H7C0C1 242 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 KRT3P12035 628 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms