RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 DACT1Q9NYF0 836 aa17.85■□□□□ 0.45
CLN8-209ENST00000635970 ZHX2Q9Y6X8 837 aa17.85■□□□□ 0.45
CLN8-209ENST00000635970 CTAGE5O15320 804 aa17.84■□□□□ 0.45
CLN8-209ENST00000635970 ZBTB48P10074 688 aaPredicted RBP17.84■□□□□ 0.45
CLN8-209ENST00000635970 AKR1B1P15121 316 aa17.84■□□□□ 0.45
CLN8-209ENST00000635970 PTGS1P23219 599 aa17.84■□□□□ 0.45
CLN8-209ENST00000635970 ABCB5Q2M3G0 1257 aa17.84■□□□□ 0.45
CLN8-209ENST00000635970 ANO6Q4KMQ2 910 aa17.84■□□□□ 0.45
CLN8-209ENST00000635970 LEO1Q8WVC0 666 aaPredicted RBP17.84■□□□□ 0.45
CLN8-209ENST00000635970 CFAP45Q9UL16 551 aa17.84■□□□□ 0.45
CLN8-209ENST00000635970 MPHOSPH10O00566 681 aaKnown RBP17.84■□□□□ 0.45
CLN8-209ENST00000635970 RASA1P20936 1047 aa17.84■□□□□ 0.45
CLN8-209ENST00000635970 KIF23Q02241 960 aaPredicted RBP17.84■□□□□ 0.45
CLN8-209ENST00000635970 PPATQ06203 517 aa17.84■□□□□ 0.45
CLN8-209ENST00000635970 SARM1Q6SZW1 724 aa17.84■□□□□ 0.45
CLN8-209ENST00000635970 CCDC186Q7Z3E2 898 aa17.84■□□□□ 0.45
CLN8-209ENST00000635970 CLEC10AQ8IUN9 316 aa17.84■□□□□ 0.45
CLN8-209ENST00000635970 DRC7Q8IY82 874 aa17.84■□□□□ 0.45
CLN8-209ENST00000635970 NECAB1Q8N987 351 aa17.84■□□□□ 0.45
CLN8-209ENST00000635970 TSC1Q92574 1164 aa17.84■□□□□ 0.45
CLN8-209ENST00000635970 TRIM5Q9C035 493 aa17.84■□□□□ 0.45
CLN8-209ENST00000635970 ASNSP08243 561 aa17.83■□□□□ 0.44
CLN8-209ENST00000635970 GUCY1A2P33402 732 aa17.83■□□□□ 0.44
CLN8-209ENST00000635970 CBX1P83916 185 aa17.83■□□□□ 0.44
CLN8-209ENST00000635970 PPIL2Q13356 520 aa17.83■□□□□ 0.44
CLN8-209ENST00000635970 LUZP1Q86V48 1076 aa17.83■□□□□ 0.44
CLN8-209ENST00000635970 TBC1D10CQ8IV04 446 aa17.83■□□□□ 0.44
CLN8-209ENST00000635970 MKNK2Q9HBH9 465 aa17.83■□□□□ 0.44
CLN8-209ENST00000635970 OGFRQ9NZT2 677 aa17.83■□□□□ 0.44
CLN8-209ENST00000635970 ANAPC4Q9UJX5 808 aa17.83■□□□□ 0.44
CLN8-209ENST00000635970 ZNF165P49910 485 aa17.82■□□□□ 0.44
CLN8-209ENST00000635970 TPRNQ4KMQ1 711 aa17.82■□□□□ 0.44
CLN8-209ENST00000635970 ARID3AQ99856 593 aa17.82■□□□□ 0.44
CLN8-209ENST00000635970 CGNQ9P2M7 1197 aaKnown RBP17.82■□□□□ 0.44
CLN8-209ENST00000635970 LOC285556D6RIA3 1793 aa17.82■□□□□ 0.44
CLN8-209ENST00000635970 TRIM75PA6NK02 468 aa17.82■□□□□ 0.44
CLN8-209ENST00000635970 SEPT2Q15019 361 aa17.82■□□□□ 0.44
CLN8-209ENST00000635970 ATL3Q6DD88 541 aa17.82■□□□□ 0.44
CLN8-209ENST00000635970 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.82■□□□□ 0.44
CLN8-209ENST00000635970 AFG3L2Q9Y4W6 797 aa17.82■□□□□ 0.44
CLN8-209ENST00000635970 MYH4Q9Y623 1939 aa17.82■□□□□ 0.44
CLN8-209ENST00000635970 USP17L5A8MUK1 530 aa17.81■□□□□ 0.44
CLN8-209ENST00000635970 ZNF213O14771 459 aa17.81■□□□□ 0.44
CLN8-209ENST00000635970 SLC3A2P08195 630 aaKnown RBP17.81■□□□□ 0.44
CLN8-209ENST00000635970 PDE4BQ07343 736 aa17.81■□□□□ 0.44
CLN8-209ENST00000635970 DGKZQ13574 1117 aa17.81■□□□□ 0.44
CLN8-209ENST00000635970 CAMK4Q16566 473 aa17.81■□□□□ 0.44
CLN8-209ENST00000635970 NKX2-3Q8TAU0 364 aa17.81■□□□□ 0.44
CLN8-209ENST00000635970 MS4A4AQ96JQ5 239 aa17.81■□□□□ 0.44
CLN8-209ENST00000635970 TNNT1P13805 278 aa17.8■□□□□ 0.44
CLN8-209ENST00000635970 MAP2K2P36507 400 aa17.8■□□□□ 0.44
CLN8-209ENST00000635970 FAM47AQ5JRC9 791 aa17.8■□□□□ 0.44
CLN8-209ENST00000635970 MRFAP1L1Q96HT8 127 aa17.8■□□□□ 0.44
CLN8-209ENST00000635970 CABP5Q9NP86 173 aa17.8■□□□□ 0.44
CLN8-209ENST00000635970 TAOK2Q9UL54 1235 aa17.8■□□□□ 0.44
CLN8-209ENST00000635970 NEDD4P46934 1319 aa17.8■□□□□ 0.44
CLN8-209ENST00000635970 SPP2Q13103 211 aa17.8■□□□□ 0.44
CLN8-209ENST00000635970 TOB2Q14106 344 aaPredicted RBP17.8■□□□□ 0.44
CLN8-209ENST00000635970 IMMTQ16891 758 aaKnown RBP17.8■□□□□ 0.44
CLN8-209ENST00000635970 CHMP4CQ96CF2 233 aa17.8■□□□□ 0.44
CLN8-209ENST00000635970 LLPHQ9BRT6 129 aaKnown RBP17.8■□□□□ 0.44
CLN8-209ENST00000635970 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.8■□□□□ 0.44
CLN8-209ENST00000635970 CTNNA3Q9UI47 895 aa17.8■□□□□ 0.44
CLN8-209ENST00000635970 KCNH4Q9UQ05 1017 aa17.8■□□□□ 0.44
CLN8-209ENST00000635970 TAF6LQ9Y6J9 622 aa17.8■□□□□ 0.44
CLN8-209ENST00000635970 CYP21A2P08686 494 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 RRP12Q5JTH9 1297 aaKnown RBP17.79■□□□□ 0.44
CLN8-209ENST00000635970 TMEM179Q6ZVK1 233 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 FERMT3Q86UX7 667 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 CKAP2LQ8IYA6 745 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 ZNF280CQ8ND82 737 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 CCDC112Q8NEF3 446 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 CCDC17Q96LX7 622 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 ZNF287Q9HBT7 754 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 PRDM10Q9NQV6 1147 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 TOMM22Q9NS69 142 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 CLIP2Q9UDT6 1046 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 U3KPZ7 1027 aaPredicted RBP17.79■□□□□ 0.44
CLN8-209ENST00000635970 CCL15-CCL14A0A0B4J2E2 113 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 MANSC4A6NHS7 340 aaPredicted RBP17.79■□□□□ 0.44
CLN8-209ENST00000635970 GOLGA6L19H0YKK7 550 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 NCBP1Q09161 790 aaKnown RBP17.79■□□□□ 0.44
CLN8-209ENST00000635970 SNAPC2Q13487 334 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 CCL15Q16663 113 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 AKNAD1Q5T1N1 836 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 ZNF444Q8N0Y2 327 aaPredicted RBP17.79■□□□□ 0.44
CLN8-209ENST00000635970 JMYQ8N9B5 988 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 BICD2Q8TD16 824 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 STAG1Q8WVM7 1258 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 BRI3BPQ8WY22 251 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 GTF3C6Q969F1 213 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 PTPN18Q99952 460 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 KCND1Q9NSA2 647 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 GINM1Q9NU53 330 aa17.79■□□□□ 0.44
CLN8-209ENST00000635970 IGF2BP3O00425 579 aaKnown RBP eCLIP17.78■□□□□ 0.44
CLN8-209ENST00000635970 FGRP09769 529 aa17.78■□□□□ 0.44
CLN8-209ENST00000635970 GTF2A2P52657 109 aa17.78■□□□□ 0.44
CLN8-209ENST00000635970 MTMR2Q13614 643 aa17.78■□□□□ 0.44
CLN8-209ENST00000635970 DHX8Q14562 1220 aaKnown RBP17.78■□□□□ 0.44
CLN8-209ENST00000635970 ACER1Q8TDN7 264 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms