RNA–Protein interactions for RNA: ENST00000633522.1

LINC01002-229, Transcript of long intergenic non-protein coding RNA 1002, human

TSL 5

Gene LINC01002, Length 570 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01002-229	ENST00000633522	CHD8	Q9HCK8	2581 aa		13.64	□□□□□ -0.23
LINC01002-229	ENST00000633522	MOXD2P	A6NHM9	499 aa		13.64	□□□□□ -0.23
LINC01002-229	ENST00000633522	EYA2	O00167	538 aa		13.64	□□□□□ -0.23
LINC01002-229	ENST00000633522	DCX	O43602	365 aa		13.64	□□□□□ -0.23
LINC01002-229	ENST00000633522	VAMP4	O75379	141 aa		13.64	□□□□□ -0.23
LINC01002-229	ENST00000633522	GRB10	Q13322	594 aa		13.64	□□□□□ -0.23
LINC01002-229	ENST00000633522	CSPP1	Q1MSJ5	1256 aa		13.64	□□□□□ -0.23
LINC01002-229	ENST00000633522	SPRED2	Q7Z698	418 aa		13.64	□□□□□ -0.23
LINC01002-229	ENST00000633522	DZIP1	Q86YF9	867 aa	Known RBP	13.64	□□□□□ -0.23
LINC01002-229	ENST00000633522	ABRA	Q8N0Z2	381 aa		13.64	□□□□□ -0.23
LINC01002-229	ENST00000633522	ZGPAT	Q8N5A5	531 aa	Known RBP	13.64	□□□□□ -0.23
LINC01002-229	ENST00000633522	CERS4	Q9HA82	394 aa		13.64	□□□□□ -0.23
LINC01002-229	ENST00000633522	FRYL	O94915	3013 aa		13.64	□□□□□ -0.23
LINC01002-229	ENST00000633522	SI	P14410	1827 aa		13.63	□□□□□ -0.23
LINC01002-229	ENST00000633522	IL9	P15248	144 aa		13.63	□□□□□ -0.23
LINC01002-229	ENST00000633522	ERCC3	P19447	782 aa		13.63	□□□□□ -0.23
LINC01002-229	ENST00000633522	CST5	P28325	142 aa	Predicted RBP	13.63	□□□□□ -0.23
LINC01002-229	ENST00000633522	TAP1	Q03518	808 aa		13.63	□□□□□ -0.23
LINC01002-229	ENST00000633522	TCF15	Q12870	199 aa		13.63	□□□□□ -0.23
LINC01002-229	ENST00000633522	WDR43	Q15061	677 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
LINC01002-229	ENST00000633522	KCNA10	Q16322	511 aa		13.63	□□□□□ -0.23
LINC01002-229	ENST00000633522	LEXM	Q3ZCV2	418 aa		13.63	□□□□□ -0.23
LINC01002-229	ENST00000633522	SLF2	Q8IX21	1173 aa		13.63	□□□□□ -0.23
LINC01002-229	ENST00000633522	NUP133	Q8WUM0	1156 aa		13.63	□□□□□ -0.23
LINC01002-229	ENST00000633522	SPATC1L	Q9H0A9	340 aa		13.63	□□□□□ -0.23
LINC01002-229	ENST00000633522	MTIF3	Q9H2K0	278 aa	Known RBP	13.63	□□□□□ -0.23
LINC01002-229	ENST00000633522	ACACB	O00763	2458 aa		13.62	□□□□□ -0.23
LINC01002-229	ENST00000633522	NSUN4	Q96CB9	384 aa	Known RBP	13.62	□□□□□ -0.23
LINC01002-229	ENST00000633522	KIAA1683	Q9H0B3	1180 aa		13.62	□□□□□ -0.23
LINC01002-229	ENST00000633522	WNT8A	Q9H1J5	351 aa		13.62	□□□□□ -0.23
LINC01002-229	ENST00000633522	UBE2Z	Q9H832	354 aa	Predicted RBP	13.62	□□□□□ -0.23
LINC01002-229	ENST00000633522	GNL3L	Q9NVN8	582 aa	Known RBP	13.62	□□□□□ -0.23
LINC01002-229	ENST00000633522	SLC4A7	Q9Y6M7	1214 aa		13.62	□□□□□ -0.23
LINC01002-229	ENST00000633522	ARVCF	O00192	962 aa		13.61	□□□□□ -0.23
LINC01002-229	ENST00000633522	ADCY6	O43306	1168 aa		13.61	□□□□□ -0.23
LINC01002-229	ENST00000633522	AKR1A1	P14550	325 aa		13.61	□□□□□ -0.23
LINC01002-229	ENST00000633522	ADORA1	P30542	326 aa		13.61	□□□□□ -0.23
LINC01002-229	ENST00000633522	ATP2B3	Q16720	1220 aa		13.61	□□□□□ -0.23
LINC01002-229	ENST00000633522	NCBP3	Q53F19	620 aa	Known RBP	13.61	□□□□□ -0.23
LINC01002-229	ENST00000633522	IER5L	Q5T953	404 aa		13.61	□□□□□ -0.23
LINC01002-229	ENST00000633522	CCDC102B	Q68D86	513 aa		13.61	□□□□□ -0.23
LINC01002-229	ENST00000633522	SLC43A3	Q8NBI5	491 aa		13.61	□□□□□ -0.23
LINC01002-229	ENST00000633522	ACER1	Q8TDN7	264 aa		13.61	□□□□□ -0.23
LINC01002-229	ENST00000633522	TINF2	Q9BSI4	451 aa		13.61	□□□□□ -0.23
LINC01002-229	ENST00000633522	SRCIN1	Q9C0H9	1055 aa		13.61	□□□□□ -0.23
LINC01002-229	ENST00000633522	DHX36	Q9H2U1	1008 aa	Known RBP	13.61	□□□□□ -0.23
LINC01002-229	ENST00000633522	ABCF2	Q9UG63	623 aa		13.61	□□□□□ -0.23
LINC01002-229	ENST00000633522	PKD1L2	Q7Z442	2459 aa		13.61	□□□□□ -0.23
LINC01002-229	ENST00000633522	ATG2A	Q2TAZ0	1938 aa		13.6	□□□□□ -0.23
LINC01002-229	ENST00000633522	GRXCR2	A6NFK2	248 aa		13.6	□□□□□ -0.23
LINC01002-229	ENST00000633522	C19orf67	A6NJJ6	358 aa		13.6	□□□□□ -0.23
LINC01002-229	ENST00000633522	CTAGE5	O15320	804 aa		13.6	□□□□□ -0.23
LINC01002-229	ENST00000633522	ATP2A2	P16615	1042 aa	Known RBP	13.6	□□□□□ -0.23
LINC01002-229	ENST00000633522	ZYX	Q15942	572 aa	Known RBP	13.6	□□□□□ -0.23
LINC01002-229	ENST00000633522	TMEM67	Q5HYA8	995 aa		13.6	□□□□□ -0.23
LINC01002-229	ENST00000633522	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.6	□□□□□ -0.23
LINC01002-229	ENST00000633522	TANC1	Q9C0D5	1861 aa		13.6	□□□□□ -0.23
LINC01002-229	ENST00000633522	APBB1	O00213	710 aa		13.59	□□□□□ -0.23
LINC01002-229	ENST00000633522	GFRA3	O60609	400 aa		13.59	□□□□□ -0.23
LINC01002-229	ENST00000633522	GH2	P01242	217 aa		13.59	□□□□□ -0.23
LINC01002-229	ENST00000633522	PTPN5	P54829	565 aa		13.59	□□□□□ -0.23
LINC01002-229	ENST00000633522	ZNF792	Q3KQV3	632 aa		13.59	□□□□□ -0.23
LINC01002-229	ENST00000633522	ERMP1	Q7Z2K6	904 aa		13.59	□□□□□ -0.23
LINC01002-229	ENST00000633522	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.59	□□□□□ -0.23
LINC01002-229	ENST00000633522	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.59	□□□□□ -0.23
LINC01002-229	ENST00000633522	ARNTL2	Q8WYA1	636 aa		13.59	□□□□□ -0.23
LINC01002-229	ENST00000633522	NOC4L	Q9BVI4	516 aa	Known RBP	13.59	□□□□□ -0.23
LINC01002-229	ENST00000633522	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.59	□□□□□ -0.23
LINC01002-229	ENST00000633522	SLC5A4	Q9NY91	659 aa		13.59	□□□□□ -0.23
LINC01002-229	ENST00000633522	MYO7A	Q13402	2215 aa		13.58	□□□□□ -0.24
LINC01002-229	ENST00000633522		A0A0U1RQG5	324 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC01002-229	ENST00000633522	ASGR1	P07306	291 aa		13.58	□□□□□ -0.24
LINC01002-229	ENST00000633522	SSTR3	P32745	418 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC01002-229	ENST00000633522	TTLL4	Q14679	1199 aa		13.58	□□□□□ -0.24
LINC01002-229	ENST00000633522	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC01002-229	ENST00000633522	TATDN1	Q6P1N9	297 aa		13.58	□□□□□ -0.24
LINC01002-229	ENST00000633522	TEX11	Q8IYF3	940 aa		13.58	□□□□□ -0.24
LINC01002-229	ENST00000633522	CDCA7L	Q96GN5	454 aa		13.58	□□□□□ -0.24
LINC01002-229	ENST00000633522	AGBL1	Q96MI9	1066 aa		13.58	□□□□□ -0.24
LINC01002-229	ENST00000633522	GLT1D1	Q96MS3	346 aa		13.58	□□□□□ -0.24
LINC01002-229	ENST00000633522	UPF3A	Q9H1J1	476 aa	Known RBP	13.58	□□□□□ -0.24
LINC01002-229	ENST00000633522	MROH8	Q9H579	483 aa		13.58	□□□□□ -0.24
LINC01002-229	ENST00000633522	LMCD1	Q9NZU5	365 aa		13.58	□□□□□ -0.24
LINC01002-229	ENST00000633522	COL4A6	Q14031	1691 aa		13.57	□□□□□ -0.24
LINC01002-229	ENST00000633522	KRT37	O76014	449 aa		13.57	□□□□□ -0.24
LINC01002-229	ENST00000633522	USP14	P54578	494 aa		13.57	□□□□□ -0.24
LINC01002-229	ENST00000633522	CCL23	P55773	120 aa		13.57	□□□□□ -0.24
LINC01002-229	ENST00000633522	NKX3-2	P78367	333 aa		13.57	□□□□□ -0.24
LINC01002-229	ENST00000633522	ZP2	Q05996	745 aa		13.57	□□□□□ -0.24
LINC01002-229	ENST00000633522	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.57	□□□□□ -0.24
LINC01002-229	ENST00000633522	MFSD14A	Q96MC6	490 aa		13.57	□□□□□ -0.24
LINC01002-229	ENST00000633522	HIPK3	Q9H422	1215 aa		13.57	□□□□□ -0.24
LINC01002-229	ENST00000633522	DIS3	Q9Y2L1	958 aa	Known RBP	13.57	□□□□□ -0.24
LINC01002-229	ENST00000633522	GRIN2D	O15399	1336 aa		13.57	□□□□□ -0.24
LINC01002-229	ENST00000633522	FLT1	P17948	1338 aa		13.57	□□□□□ -0.24
LINC01002-229	ENST00000633522	FANCI	Q9NVI1	1328 aa		13.57	□□□□□ -0.24
LINC01002-229	ENST00000633522	ATRX	P46100	2492 aa		13.56	□□□□□ -0.24
LINC01002-229	ENST00000633522	DUSP11	O75319	330 aa	Known RBP	13.56	□□□□□ -0.24
LINC01002-229	ENST00000633522	PGK2	P07205	417 aa		13.56	□□□□□ -0.24
LINC01002-229	ENST00000633522	GUCY1A2	P33402	732 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms