RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 TRAPPC10P48553 1259 aa16.34■□□□□ 0.21
LIMS4-204ENST00000632897 NDUFA8P51970 172 aa16.34■□□□□ 0.21
LIMS4-204ENST00000632897 CFAP100Q494V2 611 aa16.34■□□□□ 0.21
LIMS4-204ENST00000632897 CKAP2LQ8IYA6 745 aa16.34■□□□□ 0.21
LIMS4-204ENST00000632897 CCDC148Q8NFR7 591 aa16.34■□□□□ 0.21
LIMS4-204ENST00000632897 PDLIM2Q96JY6 352 aa16.34■□□□□ 0.21
LIMS4-204ENST00000632897 TIGD1Q96MW7 591 aa16.34■□□□□ 0.21
LIMS4-204ENST00000632897 CABP5Q9NP86 173 aa16.34■□□□□ 0.21
LIMS4-204ENST00000632897 HDAC9Q9UKV0 1011 aa16.34■□□□□ 0.21
LIMS4-204ENST00000632897 MRVI1Q9Y6F6 885 aa16.34■□□□□ 0.21
LIMS4-204ENST00000632897 SIPA1L1O43166 1804 aa16.33■□□□□ 0.2
LIMS4-204ENST00000632897 A0A1B0GVL5 298 aa16.33■□□□□ 0.2
LIMS4-204ENST00000632897 TRIM75PA6NK02 468 aa16.33■□□□□ 0.2
LIMS4-204ENST00000632897 KLRF2D3W0D1 207 aa16.33■□□□□ 0.2
LIMS4-204ENST00000632897 PFKFB1P16118 471 aa16.33■□□□□ 0.2
LIMS4-204ENST00000632897 ASPRV1Q53RT3 343 aa16.33■□□□□ 0.2
LIMS4-204ENST00000632897 RESP18Q5W5W9 173 aa16.33■□□□□ 0.2
LIMS4-204ENST00000632897 METTL16Q86W50 562 aaKnown RBP16.33■□□□□ 0.2
LIMS4-204ENST00000632897 FOXP4Q8IVH2 680 aaPredicted RBP16.33■□□□□ 0.2
LIMS4-204ENST00000632897 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
LIMS4-204ENST00000632897 DAGLBQ8NCG7 672 aa16.33■□□□□ 0.2
LIMS4-204ENST00000632897 FAM200AQ8TCP9 573 aa16.33■□□□□ 0.2
LIMS4-204ENST00000632897 HPSEQ9Y251 543 aa16.33■□□□□ 0.2
LIMS4-204ENST00000632897 SNHG28P0DPA3 235 aa16.32■□□□□ 0.2
LIMS4-204ENST00000632897 PTPREP23469 700 aa16.32■□□□□ 0.2
LIMS4-204ENST00000632897 NIM1KQ8IY84 436 aa16.32■□□□□ 0.2
LIMS4-204ENST00000632897 CCDC12Q8WUD4 166 aaPredicted RBP16.32■□□□□ 0.2
LIMS4-204ENST00000632897 GMLQ99445 158 aa16.32■□□□□ 0.2
LIMS4-204ENST00000632897 ZNF277Q9NRM2 450 aaPredicted RBP16.32■□□□□ 0.2
LIMS4-204ENST00000632897 TMOD2Q9NZR1 351 aa16.32■□□□□ 0.2
LIMS4-204ENST00000632897 PCDHAC2Q9Y5I4 1007 aa16.32■□□□□ 0.2
LIMS4-204ENST00000632897 hCG_1984214I3L0E3 225 aa16.31■□□□□ 0.2
LIMS4-204ENST00000632897 PSMD14O00487 310 aa16.31■□□□□ 0.2
LIMS4-204ENST00000632897 CYTH3O43739 400 aa16.31■□□□□ 0.2
LIMS4-204ENST00000632897 ZNF202O95125 648 aa16.31■□□□□ 0.2
LIMS4-204ENST00000632897 PDHBP11177 359 aa16.31■□□□□ 0.2
LIMS4-204ENST00000632897 SLC35G1Q2M3R5 365 aa16.31■□□□□ 0.2
LIMS4-204ENST00000632897 SHC4Q6S5L8 630 aa16.31■□□□□ 0.2
LIMS4-204ENST00000632897 ZFPM1Q8IX07 1006 aa16.31■□□□□ 0.2
LIMS4-204ENST00000632897 ZNF713Q8N859 430 aaPredicted RBP16.31■□□□□ 0.2
LIMS4-204ENST00000632897 RRP36Q96EU6 259 aaKnown RBP16.31■□□□□ 0.2
LIMS4-204ENST00000632897 TRIM34Q9BYJ4 488 aa16.31■□□□□ 0.2
LIMS4-204ENST00000632897 BARHL2Q9NY43 387 aa16.31■□□□□ 0.2
LIMS4-204ENST00000632897 FBXO2Q9UK22 296 aaPredicted RBP16.31■□□□□ 0.2
LIMS4-204ENST00000632897 ZNRF3Q9ULT6 936 aa16.31■□□□□ 0.2
LIMS4-204ENST00000632897 PCDHA4Q9UN74 947 aa16.31■□□□□ 0.2
LIMS4-204ENST00000632897 PCDHB6Q9Y5E3 794 aa16.31■□□□□ 0.2
LIMS4-204ENST00000632897 SRPRBQ9Y5M8 271 aaKnown RBP16.31■□□□□ 0.2
LIMS4-204ENST00000632897 COL4A5P29400 1685 aa16.3■□□□□ 0.2
LIMS4-204ENST00000632897 DDTLA6NHG4 134 aaPredicted RBP16.3■□□□□ 0.2
LIMS4-204ENST00000632897 STXBP3O00186 592 aa16.3■□□□□ 0.2
LIMS4-204ENST00000632897 SYKP43405 635 aa16.3■□□□□ 0.2
LIMS4-204ENST00000632897 STX1AQ16623 288 aa16.3■□□□□ 0.2
LIMS4-204ENST00000632897 TATDN1Q6P1N9 297 aa16.3■□□□□ 0.2
LIMS4-204ENST00000632897 BLIDQ8IZY5 108 aa16.3■□□□□ 0.2
LIMS4-204ENST00000632897 AGBL3Q8NEM8 1001 aa16.3■□□□□ 0.2
LIMS4-204ENST00000632897 TRIM44Q96DX7 344 aaPredicted RBP16.3■□□□□ 0.2
LIMS4-204ENST00000632897 SDF4Q9BRK5 362 aa16.3■□□□□ 0.2
LIMS4-204ENST00000632897 DNAJC18Q9H819 358 aa16.3■□□□□ 0.2
LIMS4-204ENST00000632897 SEC63Q9UGP8 760 aaKnown RBP16.3■□□□□ 0.2
LIMS4-204ENST00000632897 SPDYE2BA6NHP3 402 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 USP17L5A8MUK1 530 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 SPDYE6P0CI01 402 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 MMP14P50281 582 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 CACNB3P54284 484 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 TCP10Q12799 353 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 TTC38Q5R3I4 469 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 WWC2Q6AWC2 1192 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 USP17L2Q6R6M4 530 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 SH3BP5LQ7L8J4 393 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 ZSCAN29Q8IWY8 852 aaPredicted RBP16.29■□□□□ 0.2
LIMS4-204ENST00000632897 ELOA2Q8IYF1 753 aaPredicted RBP16.29■□□□□ 0.2
LIMS4-204ENST00000632897 OGFOD1Q8N543 542 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 PIBF1Q8WXW3 757 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 PRMT6Q96LA8 375 aaPredicted RBP16.29■□□□□ 0.2
LIMS4-204ENST00000632897 RIOX1Q9H6W3 641 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 TDRD3Q9H7E2 651 aaKnown RBP16.29■□□□□ 0.2
LIMS4-204ENST00000632897 FAM13BQ9NYF5 915 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 CLIP2Q9UDT6 1046 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 MTMR7Q9Y216 660 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 CEP350Q5VT06 3117 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 MPHOSPH10O00566 681 aaKnown RBP16.29■□□□□ 0.2
LIMS4-204ENST00000632897 RAD17O75943 681 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 GOLGA8HP0CJ92 632 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 DLGAP5Q15398 846 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 CERKLQ49MI3 558 aaPredicted RBP16.29■□□□□ 0.2
LIMS4-204ENST00000632897 ANO6Q4KMQ2 910 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 HS1BP3Q53T59 392 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 EARS2Q5JPH6 523 aaKnown RBP16.29■□□□□ 0.2
LIMS4-204ENST00000632897 HEATR3Q7Z4Q2 680 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 MTMR14Q8NCE2 650 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 GPKOWQ92917 476 aaPredicted RBP eCLIP16.29■□□□□ 0.2
LIMS4-204ENST00000632897 FERMT2Q96AC1 680 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 ANO10Q9NW15 660 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 NYAP2Q9P242 653 aa16.29■□□□□ 0.2
LIMS4-204ENST00000632897 FAM205CA6NFA0 338 aa16.28■□□□□ 0.2
LIMS4-204ENST00000632897 M0R2N6 131 aa16.28■□□□□ 0.2
LIMS4-204ENST00000632897 ZNF543Q08ER8 600 aa16.28■□□□□ 0.2
LIMS4-204ENST00000632897 GPATCH4Q5T3I0 446 aaKnown RBP16.28■□□□□ 0.2
LIMS4-204ENST00000632897 FKBP1CQ5VVH2 108 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms