RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 USP17L24Q0WX57 530 aa21.96■■□□□ 1.11
PNKP-224ENST00000631020 TRDNQ13061 729 aa21.96■■□□□ 1.11
PNKP-224ENST00000631020 MB21D2Q8IYB1 491 aaPredicted RBP21.96■■□□□ 1.11
PNKP-224ENST00000631020 GPRC5AQ8NFJ5 357 aa21.96■■□□□ 1.11
PNKP-224ENST00000631020 GREB1LQ9C091 1923 aaPredicted RBP21.95■■□□□ 1.1
PNKP-224ENST00000631020 PLIN4Q96Q06 1357 aa21.95■■□□□ 1.1
PNKP-224ENST00000631020 CAPN2P17655 700 aa21.95■■□□□ 1.1
PNKP-224ENST00000631020 MTFR1Q15390 333 aa21.95■■□□□ 1.1
PNKP-224ENST00000631020 GJB1P08034 283 aa21.94■■□□□ 1.1
PNKP-224ENST00000631020 KRT32Q14532 448 aa21.94■■□□□ 1.1
PNKP-224ENST00000631020 LBX2Q6XYB7 198 aa21.94■■□□□ 1.1
PNKP-224ENST00000631020 RALYLQ86SE5 291 aaKnown RBP21.94■■□□□ 1.1
PNKP-224ENST00000631020 ACER1Q8TDN7 264 aa21.94■■□□□ 1.1
PNKP-224ENST00000631020 CEP95Q96GE4 821 aa21.94■■□□□ 1.1
PNKP-224ENST00000631020 NEK1Q96PY6 1258 aa21.94■■□□□ 1.1
PNKP-224ENST00000631020 ZKSCAN3Q9BRR0 538 aa21.94■■□□□ 1.1
PNKP-224ENST00000631020 KANSL2Q9H9L4 492 aa21.94■■□□□ 1.1
PNKP-224ENST00000631020 TCP11L1Q9NUJ3 509 aa21.94■■□□□ 1.1
PNKP-224ENST00000631020 MTMR4Q9NYA4 1195 aa21.94■■□□□ 1.1
PNKP-224ENST00000631020 RBPJLQ9UBG7 517 aa21.94■■□□□ 1.1
PNKP-224ENST00000631020 BIN2Q9UBW5 565 aaPredicted RBP21.94■■□□□ 1.1
PNKP-224ENST00000631020 PLXNB2O15031 1838 aa21.93■■□□□ 1.1
PNKP-224ENST00000631020 A0A1W2PRG0 241 aa21.93■■□□□ 1.1
PNKP-224ENST00000631020 CCL5P13501 91 aa21.93■■□□□ 1.1
PNKP-224ENST00000631020 VCAM1P19320 739 aa21.93■■□□□ 1.1
PNKP-224ENST00000631020 ANTXR2P58335 489 aa21.93■■□□□ 1.1
PNKP-224ENST00000631020 CATSPERGQ6ZRH7 1159 aa21.93■■□□□ 1.1
PNKP-224ENST00000631020 CHST3Q7LGC8 479 aa21.93■■□□□ 1.1
PNKP-224ENST00000631020 C22orf23Q9BZE7 217 aa21.93■■□□□ 1.1
PNKP-224ENST00000631020 TXNRD2Q9NNW7 524 aa21.93■■□□□ 1.1
PNKP-224ENST00000631020 GJD2Q9UKL4 321 aa21.93■■□□□ 1.1
PNKP-224ENST00000631020 MYCP01106 439 aaPredicted RBP21.92■■□□□ 1.1
PNKP-224ENST00000631020 EEF2P13639 858 aaKnown RBP21.92■■□□□ 1.1
PNKP-224ENST00000631020 MAPK4P31152 587 aa21.92■■□□□ 1.1
PNKP-224ENST00000631020 GJA8P48165 433 aa21.92■■□□□ 1.1
PNKP-224ENST00000631020 NOVP48745 357 aa21.92■■□□□ 1.1
PNKP-224ENST00000631020 NT5C2P49902 561 aa21.92■■□□□ 1.1
PNKP-224ENST00000631020 IL17RAQ96F46 866 aa21.92■■□□□ 1.1
PNKP-224ENST00000631020 JAKMIP1Q96N16 626 aaKnown RBP21.92■■□□□ 1.1
PNKP-224ENST00000631020 RABGAP1Q9Y3P9 1069 aa21.92■■□□□ 1.1
PNKP-224ENST00000631020 CPA1P15085 419 aa21.91■■□□□ 1.1
PNKP-224ENST00000631020 ANAPC15P60006 121 aa21.91■■□□□ 1.1
PNKP-224ENST00000631020 ERVK-9P63128 1117 aa21.91■■□□□ 1.1
PNKP-224ENST00000631020 ERVK-24P63145 666 aa21.91■■□□□ 1.1
PNKP-224ENST00000631020 ICA1Q05084 483 aa21.91■■□□□ 1.1
PNKP-224ENST00000631020 ZYXQ15942 572 aaKnown RBP21.91■■□□□ 1.1
PNKP-224ENST00000631020 RCSD1Q6JBY9 416 aa21.91■■□□□ 1.1
PNKP-224ENST00000631020 RNF208Q9H0X6 261 aa21.91■■□□□ 1.1
PNKP-224ENST00000631020 INHAP05111 366 aa21.9■■□□□ 1.1
PNKP-224ENST00000631020 ELNP15502 786 aa21.9■■□□□ 1.1
PNKP-224ENST00000631020 RBM25P49756 843 aaKnown RBP21.9■■□□□ 1.1
PNKP-224ENST00000631020 EXOSC10Q01780 885 aaKnown RBP21.9■■□□□ 1.1
PNKP-224ENST00000631020 SOCS4Q8WXH5 440 aa21.9■■□□□ 1.1
PNKP-224ENST00000631020 ZSCAN10Q96SZ4 725 aaPredicted RBP21.9■■□□□ 1.1
PNKP-224ENST00000631020 SH2D4AQ9H788 454 aa21.9■■□□□ 1.1
PNKP-224ENST00000631020 NYAP2Q9P242 653 aa21.9■■□□□ 1.1
PNKP-224ENST00000631020 CLIP2Q9UDT6 1046 aa21.9■■□□□ 1.1
PNKP-224ENST00000631020 LPAR1Q92633 364 aa21.9■■□□□ 1.1
PNKP-224ENST00000631020 PRC1O43663 620 aa21.89■■□□□ 1.09
PNKP-224ENST00000631020 TTLL1O95922 423 aa21.89■■□□□ 1.09
PNKP-224ENST00000631020 XRCC5P13010 732 aaKnown RBP21.89■■□□□ 1.09
PNKP-224ENST00000631020 MCM5P33992 734 aa21.89■■□□□ 1.09
PNKP-224ENST00000631020 ATP2B2Q01814 1243 aa21.89■■□□□ 1.09
PNKP-224ENST00000631020 SEC23AQ15436 765 aa21.89■■□□□ 1.09
PNKP-224ENST00000631020 POTEEQ6S8J3 1075 aa21.89■■□□□ 1.09
PNKP-224ENST00000631020 DHX32Q7L7V1 743 aaKnown RBP21.89■■□□□ 1.09
PNKP-224ENST00000631020 IQCA1Q86XH1 822 aa21.89■■□□□ 1.09
PNKP-224ENST00000631020 ENAHQ8N8S7 591 aaPredicted RBP21.89■■□□□ 1.09
PNKP-224ENST00000631020 IGDCC4Q8TDY8 1250 aa21.89■■□□□ 1.09
PNKP-224ENST00000631020 MKL1Q969V6 931 aa21.89■■□□□ 1.09
PNKP-224ENST00000631020 SHISA4Q96DD7 197 aa21.89■■□□□ 1.09
PNKP-224ENST00000631020 TCEANC2Q96MN5 208 aa21.89■■□□□ 1.09
PNKP-224ENST00000631020 KIF2CQ99661 725 aa21.89■■□□□ 1.09
PNKP-224ENST00000631020 RPAP3Q9H6T3 665 aaPredicted RBP21.89■■□□□ 1.09
PNKP-224ENST00000631020 UPF2Q9HAU5 1272 aaKnown RBP21.89■■□□□ 1.09
PNKP-224ENST00000631020 ARHGEF10LQ9HCE6 1279 aa21.89■■□□□ 1.09
PNKP-224ENST00000631020 ZSWIM6Q9HCJ5 1215 aa21.89■■□□□ 1.09
PNKP-224ENST00000631020 GPHNQ9NQX3 736 aaPredicted RBP21.89■■□□□ 1.09
PNKP-224ENST00000631020 TMX2Q9Y320 296 aa21.89■■□□□ 1.09
PNKP-224ENST00000631020 HMGCRP04035 888 aa21.88■■□□□ 1.09
PNKP-224ENST00000631020 CASTP20810 708 aaKnown RBP21.88■■□□□ 1.09
PNKP-224ENST00000631020 CCNA1P78396 465 aa21.88■■□□□ 1.09
PNKP-224ENST00000631020 Q3C1V9 767 aa21.88■■□□□ 1.09
PNKP-224ENST00000631020 ANKS1AQ92625 1134 aa21.88■■□□□ 1.09
PNKP-224ENST00000631020 TTC14Q96N46 770 aa21.88■■□□□ 1.09
PNKP-224ENST00000631020 NUDT12Q9BQG2 462 aa21.88■■□□□ 1.09
PNKP-224ENST00000631020 TM6SF1Q9BZW5 370 aa21.88■■□□□ 1.09
PNKP-224ENST00000631020 UNC93B1Q9H1C4 597 aa21.88■■□□□ 1.09
PNKP-224ENST00000631020 SENP2Q9HC62 589 aa21.88■■□□□ 1.09
PNKP-224ENST00000631020 STX8Q9UNK0 236 aa21.88■■□□□ 1.09
PNKP-224ENST00000631020 TNKSO95271 1327 aa21.87■■□□□ 1.09
PNKP-224ENST00000631020 RLFQ13129 1914 aa21.87■■□□□ 1.09
PNKP-224ENST00000631020 IFIT3O14879 490 aaKnown RBP21.87■■□□□ 1.09
PNKP-224ENST00000631020 HMGB1P09429 215 aaKnown RBP21.87■■□□□ 1.09
PNKP-224ENST00000631020 PSMA5P28066 241 aa21.87■■□□□ 1.09
PNKP-224ENST00000631020 BLOC1S2Q6QNY1 142 aa21.87■■□□□ 1.09
PNKP-224ENST00000631020 DGKHQ86XP1 1220 aa21.87■■□□□ 1.09
PNKP-224ENST00000631020 CCAR1Q8IX12 1150 aaKnown RBP21.87■■□□□ 1.09
PNKP-224ENST00000631020 TRMT44Q8IYL2 757 aaKnown RBP21.87■■□□□ 1.09
PNKP-224ENST00000631020 TBC1D32Q96NH3 1257 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms