RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 USP17L15C9J2P7 530 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 USP17L13C9JLJ4 530 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 USP17L11C9JVI0 530 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 USP17L18D6R9N7 530 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 USP17L22D6RA61 530 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 USP17L17D6RBQ6 530 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 USP17L19D6RCP7 530 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 USP17L20D6RJB6 530 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 IGHDP01880 384 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 RASA1P20936 1047 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 ICA1Q05084 483 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 USP17L24Q0WX57 530 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 ANKRD45Q5TZF3 282 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 ZSCAN25Q6NSZ9 544 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 GPR153Q6NV75 609 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 TMEM179Q6ZVK1 233 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 GPRC5AQ8NFJ5 357 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 USP6NLQ92738 828 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 COA7Q96BR5 231 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 GPATCH3Q96I76 525 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 CABP5Q9NP86 173 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 SWAP70Q9UH65 585 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 TACC3Q9Y6A5 838 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 SZT2Q5T011 3432 aa17.14■□□□□ 0.33
CDK7-215ENST00000629350 ZNFX1Q9P2E3 1918 aaKnown RBP17.13■□□□□ 0.33
CDK7-215ENST00000629350 GJB1P08034 283 aa17.13■□□□□ 0.33
CDK7-215ENST00000629350 CYP2B6P20813 491 aa17.13■□□□□ 0.33
CDK7-215ENST00000629350 GJA8P48165 433 aa17.13■□□□□ 0.33
CDK7-215ENST00000629350 ZMYM1Q5SVZ6 1142 aa17.13■□□□□ 0.33
CDK7-215ENST00000629350 GPR142Q7Z601 462 aa17.13■□□□□ 0.33
CDK7-215ENST00000629350 PXYLP1Q8TE99 480 aa17.13■□□□□ 0.33
CDK7-215ENST00000629350 U2AF1L4Q8WU68 220 aaKnown RBP17.13■□□□□ 0.33
CDK7-215ENST00000629350 PAK6Q9NQU5 681 aaPredicted RBP17.13■□□□□ 0.33
CDK7-215ENST00000629350 PCDH10Q9P2E7 1040 aa17.13■□□□□ 0.33
CDK7-215ENST00000629350 PLXNA1Q9UIW2 1896 aa17.12■□□□□ 0.33
CDK7-215ENST00000629350 PRDM1O75626 825 aa17.12■□□□□ 0.33
CDK7-215ENST00000629350 GLRX3O76003 335 aaKnown RBP17.12■□□□□ 0.33
CDK7-215ENST00000629350 EEF2P13639 858 aaKnown RBP17.12■□□□□ 0.33
CDK7-215ENST00000629350 MORN1Q5T089 497 aa17.12■□□□□ 0.33
CDK7-215ENST00000629350 VPS53Q5VIR6 699 aa17.12■□□□□ 0.33
CDK7-215ENST00000629350 DIS3LQ8TF46 1054 aaKnown RBP17.12■□□□□ 0.33
CDK7-215ENST00000629350 FSD1Q9BTV5 496 aa17.12■□□□□ 0.33
CDK7-215ENST00000629350 LNPKQ9C0E8 428 aa17.12■□□□□ 0.33
CDK7-215ENST00000629350 FBXO28Q9NVF7 368 aa17.12■□□□□ 0.33
CDK7-215ENST00000629350 FLRT1Q9NZU1 646 aa17.12■□□□□ 0.33
CDK7-215ENST00000629350 ARPP21Q9UBL0 812 aaPredicted RBP17.12■□□□□ 0.33
CDK7-215ENST00000629350 LAMA3Q16787 3333 aa17.12■□□□□ 0.33
CDK7-215ENST00000629350 LAMA4Q16363 1823 aa17.12■□□□□ 0.33
CDK7-215ENST00000629350 MINDY4BA8MYZ0 360 aa17.11■□□□□ 0.33
CDK7-215ENST00000629350 USP14P54578 494 aa17.11■□□□□ 0.33
CDK7-215ENST00000629350 PDE1AP54750 535 aa17.11■□□□□ 0.33
CDK7-215ENST00000629350 SBK1Q52WX2 424 aa17.11■□□□□ 0.33
CDK7-215ENST00000629350 LBX2Q6XYB7 198 aa17.11■□□□□ 0.33
CDK7-215ENST00000629350 ATG4CQ96DT6 458 aa17.11■□□□□ 0.33
CDK7-215ENST00000629350 DEFB118Q96PH6 123 aa17.11■□□□□ 0.33
CDK7-215ENST00000629350 NUP88Q99567 741 aaPredicted RBP17.11■□□□□ 0.33
CDK7-215ENST00000629350 TANGO6Q9C0B7 1094 aa17.11■□□□□ 0.33
CDK7-215ENST00000629350 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDK7-215ENST00000629350 STAP2Q9UGK3 403 aa17.11■□□□□ 0.33
CDK7-215ENST00000629350 TMX2Q9Y320 296 aa17.11■□□□□ 0.33
CDK7-215ENST00000629350 RABGAP1Q9Y3P9 1069 aa17.11■□□□□ 0.33
CDK7-215ENST00000629350 EVI5O60447 810 aa17.1■□□□□ 0.33
CDK7-215ENST00000629350 HMGCRP04035 888 aa17.1■□□□□ 0.33
CDK7-215ENST00000629350 NUDT7P0C024 238 aa17.1■□□□□ 0.33
CDK7-215ENST00000629350 UBXN2AP68543 259 aa17.1■□□□□ 0.33
CDK7-215ENST00000629350 MAP3K21Q5TCX8 1036 aa17.1■□□□□ 0.33
CDK7-215ENST00000629350 VCPKMTQ9H867 229 aa17.1■□□□□ 0.33
CDK7-215ENST00000629350 ZSWIM6Q9HCJ5 1215 aa17.1■□□□□ 0.33
CDK7-215ENST00000629350 INCENPQ9NQS7 918 aa17.1■□□□□ 0.33
CDK7-215ENST00000629350 IGKV6D-41A0A0C4DH26 115 aa17.09■□□□□ 0.33
CDK7-215ENST00000629350 A0A0D9SFI3 127 aa17.09■□□□□ 0.33
CDK7-215ENST00000629350 ST18O60284 1047 aa17.09■□□□□ 0.33
CDK7-215ENST00000629350 ZFYP08048 801 aaPredicted RBP17.09■□□□□ 0.33
CDK7-215ENST00000629350 IRX6P78412 446 aaPredicted RBP17.09■□□□□ 0.33
CDK7-215ENST00000629350 ATP2B2Q01814 1243 aa17.09■□□□□ 0.33
CDK7-215ENST00000629350 B4GALNT3Q6L9W6 998 aa17.09■□□□□ 0.33
CDK7-215ENST00000629350 RASGRP2Q7LDG7 609 aa17.09■□□□□ 0.33
CDK7-215ENST00000629350 PLEKHH3Q7Z736 793 aa17.09■□□□□ 0.33
CDK7-215ENST00000629350 SMC5Q8IY18 1101 aa17.09■□□□□ 0.33
CDK7-215ENST00000629350 IFNL3Q8IZI9 196 aa17.09■□□□□ 0.33
CDK7-215ENST00000629350 NKX2-3Q8TAU0 364 aa17.09■□□□□ 0.33
CDK7-215ENST00000629350 FAM227BQ96M60 508 aa17.09■□□□□ 0.33
CDK7-215ENST00000629350 ERC2O15083 957 aa17.08■□□□□ 0.32
CDK7-215ENST00000629350 SGPL1O95470 568 aa17.08■□□□□ 0.32
CDK7-215ENST00000629350 MAPK4P31152 587 aa17.08■□□□□ 0.32
CDK7-215ENST00000629350 TDO2P48775 406 aa17.08■□□□□ 0.32
CDK7-215ENST00000629350 MOV10L1Q9BXT6 1211 aaKnown RBP17.08■□□□□ 0.32
CDK7-215ENST00000629350 LAMA2P24043 3122 aaKnown RBP17.07■□□□□ 0.32
CDK7-215ENST00000629350 FARP2O94887 1054 aaPredicted RBP17.07■□□□□ 0.32
CDK7-215ENST00000629350 CCND3P30281 292 aaPredicted RBP17.07■□□□□ 0.32
CDK7-215ENST00000629350 FAM83BQ5T0W9 1011 aa17.07■□□□□ 0.32
CDK7-215ENST00000629350 WDR78Q5VTH9 848 aa17.07■□□□□ 0.32
CDK7-215ENST00000629350 GIMAP6Q6P9H5 292 aa17.07■□□□□ 0.32
CDK7-215ENST00000629350 ZNF589Q86UQ0 364 aaPredicted RBP17.07■□□□□ 0.32
CDK7-215ENST00000629350 NPLOC4Q8TAT6 608 aa17.07■□□□□ 0.32
CDK7-215ENST00000629350 GCC1Q96CN9 775 aa17.07■□□□□ 0.32
CDK7-215ENST00000629350 CCDC17Q96LX7 622 aa17.07■□□□□ 0.32
CDK7-215ENST00000629350 ARHGEF10LQ9HCE6 1279 aa17.07■□□□□ 0.32
CDK7-215ENST00000629350 SUPT16HQ9Y5B9 1047 aaKnown RBP17.07■□□□□ 0.32
CDK7-215ENST00000629350 SMCHD1A6NHR9 2005 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms