RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NOD1Q9Y239 953 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 DAGLAQ9Y4D2 1042 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 MAST3O60307 1309 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 TNPO2O14787 897 aaKnown RBP5.89□□□□□ -1.47
LINC00550-201ENST00000629293 TFRCP02786 760 aaKnown RBP5.89□□□□□ -1.47
LINC00550-201ENST00000629293 ATP2B3Q16720 1220 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 METTL16Q86W50 562 aaKnown RBP5.89□□□□□ -1.47
LINC00550-201ENST00000629293 DZIP1Q86YF9 867 aaKnown RBP5.89□□□□□ -1.47
LINC00550-201ENST00000629293 WDR66Q8TBY9 1149 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 LRCH3Q96II8 777 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 SMC4Q9NTJ3 1288 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 RNF19AQ9NV58 838 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.89□□□□□ -1.47
LINC00550-201ENST00000629293 FARP2O94887 1054 aaPredicted RBP5.89□□□□□ -1.47
LINC00550-201ENST00000629293 EPHA4P54764 986 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 UBXN2AP68543 259 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 PPATQ06203 517 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 FAM151AQ8WW52 585 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 SSH1Q8WYL5 1049 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 DEFB118Q96PH6 123 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 ARHGAP9Q9BRR9 750 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 C1QTNF2Q9BXJ5 285 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 GNL3LQ9NVN8 582 aaKnown RBP5.89□□□□□ -1.47
LINC00550-201ENST00000629293 GABRQQ9UN88 632 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 EYA2O00167 538 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 ADCY3O60266 1144 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 UBTFL1P0CB47 393 aaPredicted RBP5.88□□□□□ -1.47
LINC00550-201ENST00000629293 CTHP32929 405 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 PHKA1P46020 1223 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 SLC4A3P48751 1232 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 FLT3LGP49771 235 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 RGS3P49796 1198 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 HDLBPQ00341 1268 aaKnown RBP5.88□□□□□ -1.47
LINC00550-201ENST00000629293 C17orf99Q6UX52 265 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 FAM83AQ86UY5 434 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 TSEN2Q8NCE0 465 aaKnown RBP5.88□□□□□ -1.47
LINC00550-201ENST00000629293 U2AF1L4Q8WU68 220 aaKnown RBP5.88□□□□□ -1.47
LINC00550-201ENST00000629293 PARK7Q99497 189 aaKnown RBP5.88□□□□□ -1.47
LINC00550-201ENST00000629293 TNNQ9UQP3 1299 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 NR2E3Q9Y5X4 410 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 FCGRTP55899 365 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 DSC3Q14574 896 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 GORABQ5T7V8 394 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 ANKRD13CQ8N6S4 541 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 SLC17A8Q8NDX2 589 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 ARMC2Q8NEN0 867 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 LPIN2Q92539 896 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 NEUROD6Q96NK8 337 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 HTATIP2Q9BUP3 242 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 USP44Q9H0E7 712 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 UNC80Q8N2C7 3258 aa5.88□□□□□ -1.47
LINC00550-201ENST00000629293 ABL1P00519 1130 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 MAPK1P28482 360 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 ADORA1P30542 326 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 TIMM10P62072 90 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 HHIPL2Q6UWX4 724 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 SREK1Q8WXA9 508 aaKnown RBP5.87□□□□□ -1.47
LINC00550-201ENST00000629293 SHISA4Q96DD7 197 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 NBPF3Q9H094 633 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 ZMYND8Q9ULU4 1186 aaPredicted RBP5.87□□□□□ -1.47
LINC00550-201ENST00000629293 PRUNE2Q8WUY3 3088 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 TMEM229AB2RXF0 380 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 SNPHO15079 494 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 TMC7Q7Z402 723 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 MRPL50Q8N5N7 158 aaKnown RBP5.87□□□□□ -1.47
LINC00550-201ENST00000629293 VGLL2Q8N8G2 317 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 TPCN2Q8NHX9 752 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 STAP2Q9UGK3 403 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 ZSWIM8A7E2V4 1837 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 INHAP05111 366 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 GJB1P08034 283 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 MVPQ14764 893 aaKnown RBP5.87□□□□□ -1.47
LINC00550-201ENST00000629293 RABL6Q3YEC7 729 aaPredicted RBP5.87□□□□□ -1.47
LINC00550-201ENST00000629293 FAM26DQ5JW98 314 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 ANKRD23Q86SG2 305 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 NKX2-3Q8TAU0 364 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 PAWRQ96IZ0 340 aaKnown RBP5.87□□□□□ -1.47
LINC00550-201ENST00000629293 DRC1Q96MC2 740 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 DOCK3Q8IZD9 2030 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 DNAH12Q6ZR08 3092 aa5.87□□□□□ -1.47
LINC00550-201ENST00000629293 SYN1P17600 705 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 ADGRD1Q6QNK2 874 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 MAMSTRQ6ZN01 415 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 CCAR1Q8IX12 1150 aaKnown RBP5.86□□□□□ -1.47
LINC00550-201ENST00000629293 FRAT1Q92837 279 aaPredicted RBP5.86□□□□□ -1.47
LINC00550-201ENST00000629293 PRR14Q9BWN1 585 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 DDTLA6NHG4 134 aaPredicted RBP5.86□□□□□ -1.47
LINC00550-201ENST00000629293 TREHO43280 583 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 PEX10O60683 326 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 NR1I2O75469 434 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 BTDP43251 543 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 GJA8P48165 433 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 SPP2Q13103 211 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 OXLD1Q5BKU9 147 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 FKBP1CQ5VVH2 108 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 ZKSCAN2Q63HK3 967 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 PI16Q6UXB8 463 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 HELQQ8TDG4 1101 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 FOXJ1Q92949 421 aa5.86□□□□□ -1.47
LINC00550-201ENST00000629293 RBCK1Q9BYM8 510 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms