RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 UNCXA6NJT0 531 aa19.37■□□□□ 0.69
CCNA1-203ENST00000625767 MCM2P49736 904 aa19.37■□□□□ 0.69
CCNA1-203ENST00000625767 APLP1P51693 650 aa19.37■□□□□ 0.69
CCNA1-203ENST00000625767 MOGSQ13724 837 aa19.37■□□□□ 0.69
CCNA1-203ENST00000625767 RTN1Q16799 776 aa19.37■□□□□ 0.69
CCNA1-203ENST00000625767 CCDC96Q2M329 555 aa19.37■□□□□ 0.69
CCNA1-203ENST00000625767 SPRYD7Q5W111 196 aa19.37■□□□□ 0.69
CCNA1-203ENST00000625767 RGMBQ6NW40 437 aa19.37■□□□□ 0.69
CCNA1-203ENST00000625767 CCDC82Q8N4S0 544 aa19.37■□□□□ 0.69
CCNA1-203ENST00000625767 SH2D4AQ9H788 454 aa19.37■□□□□ 0.69
CCNA1-203ENST00000625767 FOXD4L1Q9NU39 408 aa19.37■□□□□ 0.69
CCNA1-203ENST00000625767 ISY1Q9ULR0 285 aaKnown RBP19.37■□□□□ 0.69
CCNA1-203ENST00000625767 KCNH4Q9UQ05 1017 aa19.37■□□□□ 0.69
CCNA1-203ENST00000625767 CTDNEP1O95476 244 aa19.36■□□□□ 0.69
CCNA1-203ENST00000625767 VCAM1P19320 739 aa19.36■□□□□ 0.69
CCNA1-203ENST00000625767 ANP32AP39687 249 aaKnown RBP19.36■□□□□ 0.69
CCNA1-203ENST00000625767 SLC1A4P43007 532 aa19.36■□□□□ 0.69
CCNA1-203ENST00000625767 ZNF543Q08ER8 600 aa19.36■□□□□ 0.69
CCNA1-203ENST00000625767 TREML2Q5T2D2 321 aa19.36■□□□□ 0.69
CCNA1-203ENST00000625767 SPRYD3Q8NCJ5 442 aa19.36■□□□□ 0.69
CCNA1-203ENST00000625767 A0A0G2JLL6 359 aaPredicted RBP19.36■□□□□ 0.69
CCNA1-203ENST00000625767 PALM3A6NDB9 673 aaPredicted RBP19.36■□□□□ 0.69
CCNA1-203ENST00000625767 SLC16A2P36021 539 aa19.36■□□□□ 0.69
CCNA1-203ENST00000625767 GRM1Q13255 1194 aa19.36■□□□□ 0.69
CCNA1-203ENST00000625767 SH3D19Q5HYK7 790 aa19.36■□□□□ 0.69
CCNA1-203ENST00000625767 PRRT2Q7Z6L0 340 aaPredicted RBP19.36■□□□□ 0.69
CCNA1-203ENST00000625767 SRBD1Q8N5C6 995 aaKnown RBP19.36■□□□□ 0.69
CCNA1-203ENST00000625767 GMCL1Q96IK5 515 aa19.36■□□□□ 0.69
CCNA1-203ENST00000625767 ZSCAN31Q96LW9 406 aaPredicted RBP19.36■□□□□ 0.69
CCNA1-203ENST00000625767 UBA5Q9GZZ9 404 aa19.36■□□□□ 0.69
CCNA1-203ENST00000625767 FBXO28Q9NVF7 368 aa19.36■□□□□ 0.69
CCNA1-203ENST00000625767 FAM155AB1AL88 458 aaPredicted RBP19.35■□□□□ 0.69
CCNA1-203ENST00000625767 PARP1P09874 1014 aaKnown RBP19.35■□□□□ 0.69
CCNA1-203ENST00000625767 BMP3P12645 472 aa19.35■□□□□ 0.69
CCNA1-203ENST00000625767 NTRK3Q16288 839 aa19.35■□□□□ 0.69
CCNA1-203ENST00000625767 CYP4F22Q6NT55 531 aa19.35■□□□□ 0.69
CCNA1-203ENST00000625767 GADL1Q6ZQY3 521 aa19.35■□□□□ 0.69
CCNA1-203ENST00000625767 CTCFLQ8NI51 663 aaPredicted RBP19.35■□□□□ 0.69
CCNA1-203ENST00000625767 MS4A4AQ96JQ5 239 aa19.35■□□□□ 0.69
CCNA1-203ENST00000625767 ZIC5Q96T25 663 aa19.35■□□□□ 0.69
CCNA1-203ENST00000625767 SH2B1Q9NRF2 756 aaPredicted RBP19.35■□□□□ 0.69
CCNA1-203ENST00000625767 SYNPO2Q9UMS6 1093 aa19.35■□□□□ 0.69
CCNA1-203ENST00000625767 SMCHD1A6NHR9 2005 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 hCG_1642624A0A1W2PR95 340 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 C19orf81C9J6K1 198 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 CXCL11O14625 94 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 CYTH3O43739 400 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 JAK2O60674 1132 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 SLC10A3P09131 477 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 CALM1P0DP23 149 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 CALM2P0DP24 149 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 CALM3P0DP25 149 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 USP14P54578 494 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 TMTC3Q6ZXV5 915 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 DCAF4Q8WV16 495 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 PHKBQ93100 1093 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 C12orf42Q96LP6 360 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 RPAP3Q9H6T3 665 aaPredicted RBP19.34■□□□□ 0.69
CCNA1-203ENST00000625767 CREBZFQ9NS37 354 aa19.34■□□□□ 0.69
CCNA1-203ENST00000625767 COL11A1P12107 1806 aaPredicted RBP19.34■□□□□ 0.69
CCNA1-203ENST00000625767 TMEM232C9JQI7 657 aa19.33■□□□□ 0.69
CCNA1-203ENST00000625767 KLRF2D3W0D1 207 aa19.33■□□□□ 0.69
CCNA1-203ENST00000625767 RCAN1P53805 252 aa19.33■□□□□ 0.69
CCNA1-203ENST00000625767 FUT2Q10981 343 aa19.33■□□□□ 0.69
CCNA1-203ENST00000625767 SAMD1Q6SPF0 538 aaPredicted RBP19.33■□□□□ 0.69
CCNA1-203ENST00000625767 PAXIP1Q6ZW49 1069 aaPredicted RBP19.33■□□□□ 0.69
CCNA1-203ENST00000625767 IL27Q8NEV9 243 aa19.33■□□□□ 0.69
CCNA1-203ENST00000625767 PIBF1Q8WXW3 757 aa19.33■□□□□ 0.69
CCNA1-203ENST00000625767 MAP3K14Q99558 947 aa19.33■□□□□ 0.69
CCNA1-203ENST00000625767 SNAPC2Q13487 334 aa19.33■□□□□ 0.68
CCNA1-203ENST00000625767 CUL4AQ13619 759 aa19.33■□□□□ 0.68
CCNA1-203ENST00000625767 ASPRV1Q53RT3 343 aa19.33■□□□□ 0.68
CCNA1-203ENST00000625767 BRI3BPQ8WY22 251 aa19.33■□□□□ 0.68
CCNA1-203ENST00000625767 LPAR1Q92633 364 aa19.33■□□□□ 0.68
CCNA1-203ENST00000625767 TMOD4Q9NZQ9 345 aa19.33■□□□□ 0.68
CCNA1-203ENST00000625767 CNTNAP5Q8WYK1 1306 aa19.32■□□□□ 0.68
CCNA1-203ENST00000625767 WDR46O15213 610 aaKnown RBP19.32■□□□□ 0.68
CCNA1-203ENST00000625767 ZBTB48P10074 688 aaPredicted RBP19.32■□□□□ 0.68
CCNA1-203ENST00000625767 SNAP25P60880 206 aa19.32■□□□□ 0.68
CCNA1-203ENST00000625767 GPAT2Q6NUI2 795 aa19.32■□□□□ 0.68
CCNA1-203ENST00000625767 NSUN7Q8NE18 718 aaKnown RBP19.32■□□□□ 0.68
CCNA1-203ENST00000625767 TANGO6Q9C0B7 1094 aa19.32■□□□□ 0.68
CCNA1-203ENST00000625767 CCL15-CCL14A0A0B4J2E2 113 aa19.31■□□□□ 0.68
CCNA1-203ENST00000625767 KIF5BP33176 963 aa19.31■□□□□ 0.68
CCNA1-203ENST00000625767 CCL15Q16663 113 aa19.31■□□□□ 0.68
CCNA1-203ENST00000625767 PTPN18Q99952 460 aa19.31■□□□□ 0.68
CCNA1-203ENST00000625767 VAT1LQ9HCJ6 419 aa19.31■□□□□ 0.68
CCNA1-203ENST00000625767 RBM28Q9NW13 759 aaKnown RBP19.31■□□□□ 0.68
CCNA1-203ENST00000625767 IKQ13123 557 aaPredicted RBP19.3■□□□□ 0.68
CCNA1-203ENST00000625767 GPATCH4Q5T3I0 446 aaKnown RBP19.3■□□□□ 0.68
CCNA1-203ENST00000625767 DDX11Q96FC9 970 aa19.3■□□□□ 0.68
CCNA1-203ENST00000625767 RASSF10A6NK89 507 aa19.3■□□□□ 0.68
CCNA1-203ENST00000625767 CPLX1O14810 134 aa19.3■□□□□ 0.68
CCNA1-203ENST00000625767 TAL1P17542 331 aaPredicted RBP19.3■□□□□ 0.68
CCNA1-203ENST00000625767 GTF2A2P52657 109 aa19.3■□□□□ 0.68
CCNA1-203ENST00000625767 BECN1Q14457 450 aa19.3■□□□□ 0.68
CCNA1-203ENST00000625767 ADGRF4Q8IZF3 695 aa19.3■□□□□ 0.68
CCNA1-203ENST00000625767 PROCA1Q8NCQ7 364 aaPredicted RBP19.3■□□□□ 0.68
CCNA1-203ENST00000625767 KIFC2Q96AC6 838 aa19.3■□□□□ 0.68
CCNA1-203ENST00000625767 HHIPL1Q96JK4 782 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms