RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 CDCA7LQ96GN5 454 aa17.08■□□□□ 0.32
SNX1-214ENST00000625244 IL23AQ9NPF7 189 aa17.08■□□□□ 0.32
SNX1-214ENST00000625244 AKAP2Q9Y2D5 859 aa17.08■□□□□ 0.32
SNX1-214ENST00000625244 MTCH2Q9Y6C9 303 aa17.08■□□□□ 0.32
SNX1-214ENST00000625244 CFAP54Q96N23 3096 aa17.08■□□□□ 0.32
SNX1-214ENST00000625244 SYNRGQ9UMZ2 1314 aa17.07■□□□□ 0.32
SNX1-214ENST00000625244 UBTFL1P0CB47 393 aaPredicted RBP17.07■□□□□ 0.32
SNX1-214ENST00000625244 AKR1A1P14550 325 aa17.07■□□□□ 0.32
SNX1-214ENST00000625244 ARID4AP29374 1257 aaPredicted RBP17.07■□□□□ 0.32
SNX1-214ENST00000625244 CYP2C18P33260 490 aa17.07■□□□□ 0.32
SNX1-214ENST00000625244 GUCY1A2P33402 732 aa17.07■□□□□ 0.32
SNX1-214ENST00000625244 ATF7IPQ6VMQ6 1270 aa17.07■□□□□ 0.32
SNX1-214ENST00000625244 TINF2Q9BSI4 451 aa17.07■□□□□ 0.32
SNX1-214ENST00000625244 CD320Q9NPF0 282 aa17.07■□□□□ 0.32
SNX1-214ENST00000625244 GBF1Q92538 1859 aa17.07■□□□□ 0.32
SNX1-214ENST00000625244 MROH7Q68CQ1 1323 aa17.06■□□□□ 0.32
SNX1-214ENST00000625244 MYADML2A6NDP7 307 aa17.06■□□□□ 0.32
SNX1-214ENST00000625244 MOXD2PA6NHM9 499 aa17.06■□□□□ 0.32
SNX1-214ENST00000625244 PGK2P07205 417 aa17.06■□□□□ 0.32
SNX1-214ENST00000625244 FCER1AP12319 257 aa17.06■□□□□ 0.32
SNX1-214ENST00000625244 IRX5P78411 483 aaPredicted RBP17.06■□□□□ 0.32
SNX1-214ENST00000625244 ABCB5Q2M3G0 1257 aa17.06■□□□□ 0.32
SNX1-214ENST00000625244 CERKLQ49MI3 558 aaPredicted RBP17.06■□□□□ 0.32
SNX1-214ENST00000625244 OTOP2Q7RTS6 562 aa17.06■□□□□ 0.32
SNX1-214ENST00000625244 TANGO6Q9C0B7 1094 aa17.06■□□□□ 0.32
SNX1-214ENST00000625244 COG5Q9UP83 839 aa17.06■□□□□ 0.32
SNX1-214ENST00000625244 CDK5RAP2Q96SN8 1893 aa17.05■□□□□ 0.32
SNX1-214ENST00000625244 A0A1W2PRG0 241 aa17.05■□□□□ 0.32
SNX1-214ENST00000625244 FGBP02675 491 aa17.05■□□□□ 0.32
SNX1-214ENST00000625244 POU3F3P20264 500 aaPredicted RBP17.05■□□□□ 0.32
SNX1-214ENST00000625244 DYNLL1P63167 89 aaKnown RBP17.05■□□□□ 0.32
SNX1-214ENST00000625244 GORABQ5T7V8 394 aa17.05■□□□□ 0.32
SNX1-214ENST00000625244 KRT40Q6A162 431 aa17.05■□□□□ 0.32
SNX1-214ENST00000625244 MTIF3Q9H2K0 278 aaKnown RBP17.05■□□□□ 0.32
SNX1-214ENST00000625244 TRIOO75962 3097 aa17.05■□□□□ 0.32
SNX1-214ENST00000625244 CACNA1AO00555 2505 aa17.05■□□□□ 0.32
SNX1-214ENST00000625244 LRRC37A2A6NM11 1700 aa17.04■□□□□ 0.32
SNX1-214ENST00000625244 ELP1O95163 1332 aa17.04■□□□□ 0.32
SNX1-214ENST00000625244 DSG3P32926 999 aa17.04■□□□□ 0.32
SNX1-214ENST00000625244 ZNF792Q3KQV3 632 aa17.04■□□□□ 0.32
SNX1-214ENST00000625244 KIAA1755Q5JYT7 1200 aa17.04■□□□□ 0.32
SNX1-214ENST00000625244 FAM126BQ8IXS8 530 aa17.04■□□□□ 0.32
SNX1-214ENST00000625244 MB21D1Q8N884 522 aa17.04■□□□□ 0.32
SNX1-214ENST00000625244 ATG4CQ96DT6 458 aa17.04■□□□□ 0.32
SNX1-214ENST00000625244 GLT1D1Q96MS3 346 aa17.04■□□□□ 0.32
SNX1-214ENST00000625244 MMP19Q99542 508 aa17.04■□□□□ 0.32
SNX1-214ENST00000625244 SNRKQ9NRH2 765 aa17.04■□□□□ 0.32
SNX1-214ENST00000625244 SERPINB13Q9UIV8 391 aa17.04■□□□□ 0.32
SNX1-214ENST00000625244 A0A0G2JMZ2 1700 aa17.04■□□□□ 0.32
SNX1-214ENST00000625244 FOCADQ5VW36 1801 aa17.03■□□□□ 0.32
SNX1-214ENST00000625244 EPOPA6NHQ4 379 aa17.03■□□□□ 0.32
SNX1-214ENST00000625244 PRR33A8MZF0 331 aa17.03■□□□□ 0.32
SNX1-214ENST00000625244 ARVCFO00192 962 aa17.03■□□□□ 0.32
SNX1-214ENST00000625244 GTPBP6O43824 516 aaPredicted RBP17.03■□□□□ 0.32
SNX1-214ENST00000625244 NHLH1Q02575 133 aa17.03■□□□□ 0.32
SNX1-214ENST00000625244 SEPT2Q15019 361 aa17.03■□□□□ 0.32
SNX1-214ENST00000625244 EHD4Q9H223 541 aa17.03■□□□□ 0.32
SNX1-214ENST00000625244 CABP5Q9NP86 173 aa17.03■□□□□ 0.32
SNX1-214ENST00000625244 PCDHA11Q9Y5I1 949 aa17.03■□□□□ 0.32
SNX1-214ENST00000625244 BRWD1Q9NSI6 2320 aa17.03■□□□□ 0.32
SNX1-214ENST00000625244 UMODL1Q5DID0 1318 aa17.02■□□□□ 0.32
SNX1-214ENST00000625244 SHMT1P34896 483 aa17.02■□□□□ 0.32
SNX1-214ENST00000625244 TMEM132BQ14DG7 1078 aa17.02■□□□□ 0.32
SNX1-214ENST00000625244 SSH1Q8WYL5 1049 aa17.02■□□□□ 0.32
SNX1-214ENST00000625244 HLA-CQ95604 372 aa17.02■□□□□ 0.32
SNX1-214ENST00000625244 VTI1AQ96AJ9 217 aa17.02■□□□□ 0.32
SNX1-214ENST00000625244 CERS4Q9HA82 394 aa17.02■□□□□ 0.32
SNX1-214ENST00000625244 CNPY2Q9Y2B0 182 aa17.02■□□□□ 0.32
SNX1-214ENST00000625244 DIS3Q9Y2L1 958 aaKnown RBP17.02■□□□□ 0.32
SNX1-214ENST00000625244 ZNFX1Q9P2E3 1918 aaKnown RBP17.02■□□□□ 0.31
SNX1-214ENST00000625244 CD4P01730 458 aa17.01■□□□□ 0.31
SNX1-214ENST00000625244 ASGR1P07306 291 aa17.01■□□□□ 0.31
SNX1-214ENST00000625244 FAM184BQ9ULE4 1060 aa17.01■□□□□ 0.31
SNX1-214ENST00000625244 SLC4A7Q9Y6M7 1214 aa17.01■□□□□ 0.31
SNX1-214ENST00000625244 A0A0U1RQG5 324 aaPredicted RBP17■□□□□ 0.31
SNX1-214ENST00000625244 FLOT1O75955 427 aa17■□□□□ 0.31
SNX1-214ENST00000625244 SLC25A27O95847 323 aa17■□□□□ 0.31
SNX1-214ENST00000625244 UQCRFS1P1P0C7P4 283 aa17■□□□□ 0.31
SNX1-214ENST00000625244 CST5P28325 142 aaPredicted RBP17■□□□□ 0.31
SNX1-214ENST00000625244 SAMD1Q6SPF0 538 aaPredicted RBP17■□□□□ 0.31
SNX1-214ENST00000625244 UIMC1Q96RL1 719 aa17■□□□□ 0.31
SNX1-214ENST00000625244 ZNF316A6NFI3 1004 aaPredicted RBP16.99■□□□□ 0.31
SNX1-214ENST00000625244 TLR3O15455 904 aaKnown RBP16.99■□□□□ 0.31
SNX1-214ENST00000625244 ADCY6O43306 1168 aa16.99■□□□□ 0.31
SNX1-214ENST00000625244 DUSP11O75319 330 aaKnown RBP16.99■□□□□ 0.31
SNX1-214ENST00000625244 CYP2E1P05181 493 aaPredicted RBP16.99■□□□□ 0.31
SNX1-214ENST00000625244 CA3P07451 260 aa16.99■□□□□ 0.31
SNX1-214ENST00000625244 C6orf222P0C671 652 aaPredicted RBP16.99■□□□□ 0.31
SNX1-214ENST00000625244 USP5P45974 858 aa16.99■□□□□ 0.31
SNX1-214ENST00000625244 PLCD1P51178 756 aa16.99■□□□□ 0.31
SNX1-214ENST00000625244 CCL23P55773 120 aa16.99■□□□□ 0.31
SNX1-214ENST00000625244 KCTD2Q14681 263 aa16.99■□□□□ 0.31
SNX1-214ENST00000625244 VWCEQ96DN2 955 aa16.99■□□□□ 0.31
SNX1-214ENST00000625244 HIPK3Q9H422 1215 aa16.99■□□□□ 0.31
SNX1-214ENST00000625244 SNAI1O95863 264 aaPredicted RBP16.98■□□□□ 0.31
SNX1-214ENST00000625244 ATP2A2P16615 1042 aaKnown RBP16.98■□□□□ 0.31
SNX1-214ENST00000625244 SPICE1Q8N0Z3 855 aa16.98■□□□□ 0.31
SNX1-214ENST00000625244 PCSK9Q8NBP7 692 aaKnown RBP16.98■□□□□ 0.31
SNX1-214ENST00000625244 FBXL18Q96ME1 805 aa16.98■□□□□ 0.31
SNX1-214ENST00000625244 ZHX1Q9UKY1 873 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms