RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 TGIF2Q9GZN2 237 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 SSU72Q9NP77 194 aaKnown RBP5.12□□□□□ -1.59
CDKL5-208ENST00000624953 PRDM5Q9NQX1 630 aaPredicted RBP5.12□□□□□ -1.59
CDKL5-208ENST00000624953 PODXL2Q9NZ53 605 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 GMIPQ9P107 970 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 GTF2IRD1Q9UHL9 959 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 CEP131Q9UPN4 1083 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 PCDHB14Q9Y5E9 798 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 PITPNM2Q9BZ72 1349 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 AKNAQ7Z591 1439 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 CDK13Q14004 1512 aaKnown RBP5.12□□□□□ -1.59
CDKL5-208ENST00000624953 MROH2AA6NES4 1674 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 CDC42BPAQ5VT25 1732 aa5.11□□□□□ -1.59
CDKL5-208ENST00000624953 RGS13O14921 159 aa5.11□□□□□ -1.59
CDKL5-208ENST00000624953 GRIN3BO60391 1043 aa5.11□□□□□ -1.59
CDKL5-208ENST00000624953 UBOX5O94941 541 aa5.11□□□□□ -1.59
CDKL5-208ENST00000624953 KIR3DL1P43629 444 aa5.11□□□□□ -1.59
CDKL5-208ENST00000624953 COL9A2Q14055 689 aaPredicted RBP5.11□□□□□ -1.59
CDKL5-208ENST00000624953 ZNF746Q6NUN9 644 aaPredicted RBP5.11□□□□□ -1.59
CDKL5-208ENST00000624953 SPRED2Q7Z698 418 aa5.11□□□□□ -1.59
CDKL5-208ENST00000624953 FBXL18Q96ME1 805 aa5.11□□□□□ -1.59
CDKL5-208ENST00000624953 DPH2Q9BQC3 489 aaPredicted RBP5.11□□□□□ -1.59
CDKL5-208ENST00000624953 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.11□□□□□ -1.59
CDKL5-208ENST00000624953 POGZQ7Z3K3 1410 aa5.11□□□□□ -1.59
CDKL5-208ENST00000624953 REREQ9P2R6 1566 aa5.11□□□□□ -1.59
CDKL5-208ENST00000624953 ALKQ9UM73 1620 aa5.11□□□□□ -1.59
CDKL5-208ENST00000624953 POLR1AO95602 1720 aaPredicted RBP5.11□□□□□ -1.59
CDKL5-208ENST00000624953 STRCP1A6NGW2 1772 aa5.11□□□□□ -1.59
CDKL5-208ENST00000624953 TMEM265A0A087WTH1 108 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 CCNFP41002 786 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 ZNF165P49910 485 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 YARSP54577 528 aaKnown RBP5.1□□□□□ -1.59
CDKL5-208ENST00000624953 PAK2Q13177 524 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 MED1Q15648 1581 aaPredicted RBP5.1□□□□□ -1.59
CDKL5-208ENST00000624953 GAB4Q2WGN9 574 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 ARID4BQ4LE39 1312 aaPredicted RBP5.1□□□□□ -1.59
CDKL5-208ENST00000624953 SEZ6Q53EL9 994 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 INTS3Q68E01 1043 aaKnown RBP5.1□□□□□ -1.59
CDKL5-208ENST00000624953 OVOS1Q6IE37 1185 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 THAP5Q7Z6K1 395 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 MAGI2Q86UL8 1455 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 STK11IPQ8N1F8 1099 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 FAM13CQ8NE31 585 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 MYO3AQ8NEV4 1616 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 PIWIL2Q8TC59 973 aaKnown RBP5.1□□□□□ -1.59
CDKL5-208ENST00000624953 RNF141Q8WVD5 230 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 TMEM40Q8WWA1 233 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 NKD1Q969G9 470 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 ATG4CQ96DT6 458 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 PICK1Q9NRD5 415 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 ADGRE2Q9UHX3 823 aa5.1□□□□□ -1.59
CDKL5-208ENST00000624953 XIRP1Q702N8 1843 aaKnown RBP5.09□□□□□ -1.59
CDKL5-208ENST00000624953 CLTCQ00610 1675 aaKnown RBP5.09□□□□□ -1.59
CDKL5-208ENST00000624953 PREX2Q70Z35 1606 aa5.09□□□□□ -1.59
CDKL5-208ENST00000624953 WNT11O96014 354 aa5.09□□□□□ -1.59
CDKL5-208ENST00000624953 TCF3P15923 654 aa5.09□□□□□ -1.59
CDKL5-208ENST00000624953 YBX3P16989 372 aaKnown RBP eCLIP5.09□□□□□ -1.59
CDKL5-208ENST00000624953 ETV3P41162 512 aa5.09□□□□□ -1.59
CDKL5-208ENST00000624953 CEBPAP49715 358 aaPredicted RBP5.09□□□□□ -1.59
CDKL5-208ENST00000624953 SFRP5Q5T4F7 317 aa5.09□□□□□ -1.59
CDKL5-208ENST00000624953 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
CDKL5-208ENST00000624953 SPATA32Q96LK8 384 aa5.09□□□□□ -1.59
CDKL5-208ENST00000624953 GPR62Q9BZJ7 368 aa5.09□□□□□ -1.59
CDKL5-208ENST00000624953 LRRC4CQ9HCJ2 640 aa5.09□□□□□ -1.59
CDKL5-208ENST00000624953 CAMSAP1Q5T5Y3 1602 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 ATP10AO60312 1499 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 IQSEC2Q5JU85 1478 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 C9orf84Q5VXU9 1444 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 ACRP10323 421 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 IMPDH2P12268 514 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 NME1P15531 152 aaKnown RBP5.08□□□□□ -1.6
CDKL5-208ENST00000624953 FUT4P22083 530 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 TNK2Q07912 1038 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 LRRFIP1Q32MZ4 808 aaKnown RBP5.08□□□□□ -1.6
CDKL5-208ENST00000624953 DIEXFQ68CQ4 756 aaKnown RBP5.08□□□□□ -1.6
CDKL5-208ENST00000624953 ZNF574Q6ZN55 896 aaPredicted RBP5.08□□□□□ -1.6
CDKL5-208ENST00000624953 NLRC3Q7RTR2 1065 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 CDH24Q86UP0 819 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 MFSD4AQ8N468 514 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 DTWD2Q8NBA8 298 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 BAHD1Q8TBE0 780 aaPredicted RBP5.08□□□□□ -1.6
CDKL5-208ENST00000624953 GPRASP2Q96D09 838 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 CCDC74BQ96LY2 380 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 TINF2Q9BSI4 451 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 ASPNQ9BXN1 380 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 DUSP15Q9H1R2 295 aaPredicted RBP5.08□□□□□ -1.6
CDKL5-208ENST00000624953 ANTXR1Q9H6X2 564 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 ZNF281Q9Y2X9 895 aa5.08□□□□□ -1.6
CDKL5-208ENST00000624953 PTPRTO14522 1441 aa5.07□□□□□ -1.6
CDKL5-208ENST00000624953 NCOA1Q15788 1441 aa5.07□□□□□ -1.6
CDKL5-208ENST00000624953 CD8BP10966 210 aa5.07□□□□□ -1.6
CDKL5-208ENST00000624953 ITGB5P18084 799 aa5.07□□□□□ -1.6
CDKL5-208ENST00000624953 ABI1Q8IZP0 508 aa5.07□□□□□ -1.6
CDKL5-208ENST00000624953 HRASLS5Q96KN8 279 aa5.07□□□□□ -1.6
CDKL5-208ENST00000624953 KREMEN1Q96MU8 473 aa5.07□□□□□ -1.6
CDKL5-208ENST00000624953 GINM1Q9NU53 330 aa5.07□□□□□ -1.6
CDKL5-208ENST00000624953 SLC5A6Q9Y289 635 aa5.07□□□□□ -1.6
CDKL5-208ENST00000624953 UHRF1BP1Q6BDS2 1440 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 SCAPERQ9BY12 1400 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms