RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 PAG1Q9NWQ8 432 aa13.23□□□□□ -0.29
LINC00963-214ENST00000622680 HOXC10Q9NYD6 342 aa13.23□□□□□ -0.29
LINC00963-214ENST00000622680 SWAP70Q9UH65 585 aa13.23□□□□□ -0.29
LINC00963-214ENST00000622680 POTEB2H3BUK9 544 aa13.22□□□□□ -0.29
LINC00963-214ENST00000622680 ADD2P35612 726 aa13.22□□□□□ -0.29
LINC00963-214ENST00000622680 ADCYAP1R1P41586 468 aa13.22□□□□□ -0.29
LINC00963-214ENST00000622680 TMEM132BQ14DG7 1078 aa13.22□□□□□ -0.29
LINC00963-214ENST00000622680 LRRC41Q15345 812 aa13.22□□□□□ -0.29
LINC00963-214ENST00000622680 SHHQ15465 462 aa13.22□□□□□ -0.29
LINC00963-214ENST00000622680 SH3RF1Q7Z6J0 888 aa13.22□□□□□ -0.29
LINC00963-214ENST00000622680 SIRT2Q8IXJ6 389 aa13.22□□□□□ -0.29
LINC00963-214ENST00000622680 MB21D1Q8N884 522 aa13.22□□□□□ -0.29
LINC00963-214ENST00000622680 ARRDC4Q8NCT1 418 aa13.22□□□□□ -0.29
LINC00963-214ENST00000622680 LENG1Q96BZ8 264 aaPredicted RBP13.22□□□□□ -0.29
LINC00963-214ENST00000622680 BOLA2Q9H3K6 86 aa13.22□□□□□ -0.29
LINC00963-214ENST00000622680 MROH8Q9H579 483 aa13.22□□□□□ -0.29
LINC00963-214ENST00000622680 TMX2Q9Y320 296 aa13.22□□□□□ -0.29
LINC00963-214ENST00000622680 CHD7Q9P2D1 2997 aa13.22□□□□□ -0.29
LINC00963-214ENST00000622680 SCN5AQ14524 2016 aa13.22□□□□□ -0.29
LINC00963-214ENST00000622680 WDR46O15213 610 aaKnown RBP13.21□□□□□ -0.29
LINC00963-214ENST00000622680 RAD21O60216 631 aa13.21□□□□□ -0.29
LINC00963-214ENST00000622680 PGK2P07205 417 aa13.21□□□□□ -0.29
LINC00963-214ENST00000622680 CDK8P49336 464 aa13.21□□□□□ -0.29
LINC00963-214ENST00000622680 SNX17Q15036 470 aa13.21□□□□□ -0.29
LINC00963-214ENST00000622680 ZNF697Q5TEC3 545 aa13.21□□□□□ -0.29
LINC00963-214ENST00000622680 BADQ92934 168 aa13.21□□□□□ -0.29
LINC00963-214ENST00000622680 SH2D4AQ9H788 454 aa13.21□□□□□ -0.29
LINC00963-214ENST00000622680 MUC3AQ02505 3323 aa13.21□□□□□ -0.3
LINC00963-214ENST00000622680 TRIM43BA6NCK2 446 aa13.2□□□□□ -0.3
LINC00963-214ENST00000622680 USP17L12C9JPN9 530 aa13.2□□□□□ -0.3
LINC00963-214ENST00000622680 USP17L21D6R901 530 aa13.2□□□□□ -0.3
LINC00963-214ENST00000622680 FCER1AP12319 257 aa13.2□□□□□ -0.3
LINC00963-214ENST00000622680 EEF2P13639 858 aaKnown RBP13.2□□□□□ -0.3
LINC00963-214ENST00000622680 TAL1P17542 331 aaPredicted RBP13.2□□□□□ -0.3
LINC00963-214ENST00000622680 C12orf60Q5U649 245 aa13.2□□□□□ -0.3
LINC00963-214ENST00000622680 FAM109BQ6ICB4 259 aaPredicted RBP13.2□□□□□ -0.3
LINC00963-214ENST00000622680 C16orf86Q6ZW13 317 aa13.2□□□□□ -0.3
LINC00963-214ENST00000622680 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.2□□□□□ -0.32e-6■■■■□ 21.4
LINC00963-214ENST00000622680 TRIM43Q96BQ3 446 aaPredicted RBP13.2□□□□□ -0.3
LINC00963-214ENST00000622680 MMP19Q99542 508 aa13.2□□□□□ -0.3
LINC00963-214ENST00000622680 COL25A1Q9BXS0 654 aaPredicted RBP13.2□□□□□ -0.3
LINC00963-214ENST00000622680 ATP8A2Q9NTI2 1148 aa13.2□□□□□ -0.3
LINC00963-214ENST00000622680 SLC5A4Q9NY91 659 aa13.2□□□□□ -0.3
LINC00963-214ENST00000622680 COG6Q9Y2V7 657 aa13.2□□□□□ -0.3
LINC00963-214ENST00000622680 ROBO3Q96MS0 1386 aa13.2□□□□□ -0.3
LINC00963-214ENST00000622680 TRANK1O15050 2925 aa13.19□□□□□ -0.3
LINC00963-214ENST00000622680 ZBED9Q6R2W3 1325 aa13.19□□□□□ -0.3
LINC00963-214ENST00000622680 HMMRO75330 724 aa13.19□□□□□ -0.3
LINC00963-214ENST00000622680 PGK1P00558 417 aa13.19□□□□□ -0.3
LINC00963-214ENST00000622680 ITGB8P26012 769 aa13.19□□□□□ -0.3
LINC00963-214ENST00000622680 FAM83BQ5T0W9 1011 aa13.19□□□□□ -0.3
LINC00963-214ENST00000622680 ABRAQ8N0Z2 381 aa13.19□□□□□ -0.3
LINC00963-214ENST00000622680 MIER1Q8N108 512 aa13.19□□□□□ -0.3
LINC00963-214ENST00000622680 NUP88Q99567 741 aaPredicted RBP13.19□□□□□ -0.3
LINC00963-214ENST00000622680 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.19□□□□□ -0.3
LINC00963-214ENST00000622680 XPNPEP3Q9NQH7 507 aa13.19□□□□□ -0.3
LINC00963-214ENST00000622680 SLC4A4Q9Y6R1 1079 aa13.19□□□□□ -0.3
LINC00963-214ENST00000622680 TRIP12Q14669 1992 aaPredicted RBP13.19□□□□□ -0.3
LINC00963-214ENST00000622680 TCF20Q9UGU0 1960 aaKnown RBP13.18□□□□□ -0.3
LINC00963-214ENST00000622680 ATP5JP18859 108 aa13.18□□□□□ -0.3
LINC00963-214ENST00000622680 TLE2Q04725 743 aa13.18□□□□□ -0.3
LINC00963-214ENST00000622680 RIOX2Q8IUF8 465 aa13.18□□□□□ -0.3
LINC00963-214ENST00000622680 RPAP2Q8IXW5 612 aaPredicted RBP13.18□□□□□ -0.3
LINC00963-214ENST00000622680 AMOTL1Q8IY63 956 aa13.18□□□□□ -0.3
LINC00963-214ENST00000622680 STK11IPQ8N1F8 1099 aa13.18□□□□□ -0.3
LINC00963-214ENST00000622680 CCDC17Q96LX7 622 aa13.18□□□□□ -0.3
LINC00963-214ENST00000622680 HAUS7Q99871 368 aa13.18□□□□□ -0.3
LINC00963-214ENST00000622680 TINF2Q9BSI4 451 aa13.18□□□□□ -0.3
LINC00963-214ENST00000622680 PUS7LQ9H0K6 701 aaKnown RBP13.18□□□□□ -0.3
LINC00963-214ENST00000622680 GOPCQ9HD26 462 aa13.18□□□□□ -0.3
LINC00963-214ENST00000622680 ZBTB40Q9NUA8 1239 aa13.18□□□□□ -0.3
LINC00963-214ENST00000622680 ZNF214Q9UL59 606 aaPredicted RBP13.18□□□□□ -0.3
LINC00963-214ENST00000622680 PPP1R9AQ9ULJ8 1098 aa13.18□□□□□ -0.3
LINC00963-214ENST00000622680 ADAMTS5Q9UNA0 930 aa13.18□□□□□ -0.3
LINC00963-214ENST00000622680 PHF24Q9UPV7 400 aa13.18□□□□□ -0.3
LINC00963-214ENST00000622680 A0A1W2PQ45 241 aaPredicted RBP13.17□□□□□ -0.3
LINC00963-214ENST00000622680 A0A1W2PQY0 241 aa13.17□□□□□ -0.3
LINC00963-214ENST00000622680 VWA5AO00534 786 aa13.17□□□□□ -0.3
LINC00963-214ENST00000622680 SMARCA5O60264 1052 aaPredicted RBP13.17□□□□□ -0.3
LINC00963-214ENST00000622680 SLC25A27O95847 323 aa13.17□□□□□ -0.3
LINC00963-214ENST00000622680 RARBP10826 455 aa13.17□□□□□ -0.3
LINC00963-214ENST00000622680 KCTD2Q14681 263 aa13.17□□□□□ -0.3
LINC00963-214ENST00000622680 ZNF792Q3KQV3 632 aa13.17□□□□□ -0.3
LINC00963-214ENST00000622680 CTR9Q6PD62 1173 aa13.17□□□□□ -0.3
LINC00963-214ENST00000622680 REPS2Q8NFH8 660 aa13.17□□□□□ -0.3
LINC00963-214ENST00000622680 MYLIPQ8WY64 445 aa13.17□□□□□ -0.3
LINC00963-214ENST00000622680 CDX2Q99626 313 aaPredicted RBP13.17□□□□□ -0.3
LINC00963-214ENST00000622680 TTYH1Q9H313 450 aaPredicted RBP13.17□□□□□ -0.3
LINC00963-214ENST00000622680 DDX19BQ9UMR2 479 aa13.17□□□□□ -0.3
LINC00963-214ENST00000622680 PTPRSQ13332 1948 aa13.17□□□□□ -0.3
LINC00963-214ENST00000622680 TANC1Q9C0D5 1861 aa13.16□□□□□ -0.3
LINC00963-214ENST00000622680 PQBP1O60828 265 aaKnown RBP13.16□□□□□ -0.3
LINC00963-214ENST00000622680 RAB11FIP3O75154 756 aa13.16□□□□□ -0.3
LINC00963-214ENST00000622680 CLTBP09497 229 aa13.16□□□□□ -0.3
LINC00963-214ENST00000622680 STAT3P40763 770 aa13.16□□□□□ -0.3
LINC00963-214ENST00000622680 EPHB4P54760 987 aa13.16□□□□□ -0.3
LINC00963-214ENST00000622680 DDRGK1Q96HY6 314 aa13.16□□□□□ -0.3
LINC00963-214ENST00000622680 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC00963-214ENST00000622680 KANSL2Q9H9L4 492 aa13.16□□□□□ -0.3
LINC00963-214ENST00000622680 SYNRGQ9UMZ2 1314 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms