RNA–Protein interactions for RNA: ENST00000621840.4

TDRD3-209, Transcript of tudor domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TDRD3, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-209ENST00000621840 SLC8A1P32418 973 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 LSP1P33241 339 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 CCT6AP40227 531 aaKnown RBP8.79□□□□□ -1
TDRD3-209ENST00000621840 STX17P56962 302 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 CDK17Q00537 523 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 PAK1Q13153 545 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 SEMA3FQ13275 785 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 PDCLQ13371 301 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 KCNJ12Q14500 433 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 PTGISQ16647 500 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 HSP90AB3PQ58FF7 597 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 ANKRD13DQ6ZTN6 518 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 RAB11FIP4Q86YS3 637 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 GSPT2Q8IYD1 628 aaKnown RBP8.79□□□□□ -1
TDRD3-209ENST00000621840 ARFGAP2Q8N6H7 521 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 RETREG2Q8NC44 543 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 TRIM58Q8NG06 486 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 CAPZA3Q96KX2 299 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 ATP6V0A4Q9HBG4 840 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 FBXO3Q9UK99 471 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 SNX12Q9UMY4 172 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 LUC7L2Q9Y383 392 aaKnown RBP8.79□□□□□ -1
TDRD3-209ENST00000621840 NUP188Q5SRE5 1749 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 HMGB1P1B2RPK0 211 aaPredicted RBP8.79□□□□□ -1
TDRD3-209ENST00000621840 EYA2O00167 538 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 RANBP6O60518 1105 aaKnown RBP8.79□□□□□ -1
TDRD3-209ENST00000621840 PPP1R37O75864 691 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 IDEP14735 1019 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 TCP1P17987 556 aaKnown RBP8.79□□□□□ -1
TDRD3-209ENST00000621840 C2orf54Q08AI8 447 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 PPP4R3AQ6IN85 833 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 CCDC13Q8IYE1 715 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 ABTB2Q8N961 1025 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 KCNH5Q8NCM2 988 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 NOC3LQ8WTT2 800 aaKnown RBP8.79□□□□□ -1
TDRD3-209ENST00000621840 PHKBQ93100 1093 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 NUP58Q9BVL2 599 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 CSRNP2Q9H175 543 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 EHD4Q9H223 541 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 SEC31BQ9NQW1 1179 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 STIM2Q9P246 746 aa8.79□□□□□ -1
TDRD3-209ENST00000621840 PDS5AQ29RF7 1337 aaKnown RBP8.78□□□□□ -1
TDRD3-209ENST00000621840 A0A087WZG4 1122 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 H7C1D1 291 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 ENC1O14682 589 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 TACC1O75410 805 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 FAM107AO95990 144 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 EEF1GP26641 437 aaKnown RBP8.78□□□□□ -1
TDRD3-209ENST00000621840 VAV2P52735 878 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 SLC8A3P57103 927 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 GRIN1Q05586 938 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 PAK2Q13177 524 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 SPECC1Q5M775 1068 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 NFXL1Q6ZNB6 911 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 COPS6Q7L5N1 327 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 ARMC9Q7Z3E5 817 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 MICU3Q86XE3 530 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 AIDAQ96BJ3 306 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 MTA3Q9BTC8 594 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 SLC26A6Q9BXS9 759 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.78□□□□□ -1
TDRD3-209ENST00000621840 CD248Q9HCU0 757 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 SLC40A1Q9NP59 571 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 TAB2Q9NYJ8 693 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 BCCIPQ9P287 314 aaKnown RBP eCLIP8.78□□□□□ -1
TDRD3-209ENST00000621840 TRIM10Q9UDY6 481 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 PRAMEF22A3QJZ6 481 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 TRIM75PA6NK02 468 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 PDE2AO00408 941 aaPredicted RBP8.78□□□□□ -1
TDRD3-209ENST00000621840 GPAA1O43292 621 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 GTPBP6O43824 516 aaPredicted RBP8.78□□□□□ -1
TDRD3-209ENST00000621840 DEXIO95424 95 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 NR1D1P20393 614 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 FOXO4P98177 505 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 UBXN1Q04323 297 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 SKIDA1Q1XH10 827 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 LMBR1LQ6UX01 489 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 CCDC121Q6ZUS5 278 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 NLRP14Q86W24 1093 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 MYCBPAPQ8TBZ2 947 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.78□□□□□ -13e-10■■■■■ 88.3
TDRD3-209ENST00000621840 CHP1Q99653 195 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 LY9Q9HBG7 655 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 FAM217BQ9NTX9 383 aaPredicted RBP8.78□□□□□ -1
TDRD3-209ENST00000621840 RNF14Q9UBS8 474 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 HYOU1Q9Y4L1 999 aa8.78□□□□□ -1
TDRD3-209ENST00000621840 BTBD18B2RXH4 712 aa8.77□□□□□ -1.01
TDRD3-209ENST00000621840 USO1O60763 962 aaKnown RBP8.77□□□□□ -1.01
TDRD3-209ENST00000621840 SRGAP2O75044 1071 aa8.77□□□□□ -1.01
TDRD3-209ENST00000621840 ZMYND10O75800 440 aa8.77□□□□□ -1.01
TDRD3-209ENST00000621840 ZKSCAN8Q15776 578 aaPredicted RBP8.77□□□□□ -1.01
TDRD3-209ENST00000621840 C11orf91Q3C1V1 193 aa8.77□□□□□ -1.01
TDRD3-209ENST00000621840 CFAP58Q5T655 872 aa8.77□□□□□ -1.01
TDRD3-209ENST00000621840 RNF187Q5TA31 235 aaPredicted RBP8.77□□□□□ -1.01
TDRD3-209ENST00000621840 RCSD1Q6JBY9 416 aa8.77□□□□□ -1.01
TDRD3-209ENST00000621840 C6orf89Q6UWU4 347 aa8.77□□□□□ -1.01
TDRD3-209ENST00000621840 CYB5R4Q7L1T6 521 aa8.77□□□□□ -1.01
TDRD3-209ENST00000621840 LRP10Q7Z4F1 713 aa8.77□□□□□ -1.01
TDRD3-209ENST00000621840 PARP9Q8IXQ6 854 aa8.77□□□□□ -1.01
TDRD3-209ENST00000621840 IFT20Q8IY31 132 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms