RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 KLRC3Q07444 240 aa24.44■■□□□ 1.5
SMC6-210ENST00000621152 SMC5Q8IY18 1101 aa24.44■■□□□ 1.5
SMC6-210ENST00000621152 ANKLE1Q8NAG6 615 aa24.44■■□□□ 1.5
SMC6-210ENST00000621152 DIS3LQ8TF46 1054 aaKnown RBP24.44■■□□□ 1.5
SMC6-210ENST00000621152 MROH8Q9H579 483 aa24.44■■□□□ 1.5
SMC6-210ENST00000621152 ADAMTS5Q9UNA0 930 aa24.44■■□□□ 1.5
SMC6-210ENST00000621152 PPARAQ07869 468 aa24.43■■□□□ 1.5
SMC6-210ENST00000621152 TMEM132BQ14DG7 1078 aa24.43■■□□□ 1.5
SMC6-210ENST00000621152 HABP4Q5JVS0 413 aaKnown RBP24.43■■□□□ 1.5
SMC6-210ENST00000621152 OGDHLQ9ULD0 1010 aa24.43■■□□□ 1.5
SMC6-210ENST00000621152 NR2E3Q9Y5X4 410 aa24.43■■□□□ 1.5
SMC6-210ENST00000621152 IGKV6D-41A0A0C4DH26 115 aa24.42■■□□□ 1.5
SMC6-210ENST00000621152 ADORA2AP29274 412 aa24.42■■□□□ 1.5
SMC6-210ENST00000621152 FAM47AQ5JRC9 791 aa24.42■■□□□ 1.5
SMC6-210ENST00000621152 NUP88Q99567 741 aaPredicted RBP24.42■■□□□ 1.5
SMC6-210ENST00000621152 HELLSQ9NRZ9 838 aa24.42■■□□□ 1.5
SMC6-210ENST00000621152 MTMR4Q9NYA4 1195 aa24.42■■□□□ 1.5
SMC6-210ENST00000621152 PPP1R9AQ9ULJ8 1098 aa24.42■■□□□ 1.5
SMC6-210ENST00000621152 SUPT16HQ9Y5B9 1047 aaKnown RBP24.42■■□□□ 1.5
SMC6-210ENST00000621152 TRIM6-TRIM34B2RNG4 842 aa24.41■■□□□ 1.5
SMC6-210ENST00000621152 VWA5AO00534 786 aa24.41■■□□□ 1.5
SMC6-210ENST00000621152 TSPY3P0CV98 308 aa24.41■■□□□ 1.5
SMC6-210ENST00000621152 TSPY8P0CW00 308 aa24.41■■□□□ 1.5
SMC6-210ENST00000621152 TFAP4Q01664 338 aa24.41■■□□□ 1.5
SMC6-210ENST00000621152 NEDD1Q8NHV4 660 aa24.41■■□□□ 1.5
SMC6-210ENST00000621152 MKL1Q969V6 931 aa24.41■■□□□ 1.5
SMC6-210ENST00000621152 CEP95Q96GE4 821 aa24.41■■□□□ 1.5
SMC6-210ENST00000621152 NBPF3Q9H094 633 aa24.41■■□□□ 1.5
SMC6-210ENST00000621152 COLQQ9Y215 455 aaPredicted RBP24.41■■□□□ 1.5
SMC6-210ENST00000621152 EVI5O60447 810 aa24.4■■□□□ 1.5
SMC6-210ENST00000621152 COBLO75128 1261 aa24.4■■□□□ 1.5
SMC6-210ENST00000621152 SLC25A27O95847 323 aa24.4■■□□□ 1.5
SMC6-210ENST00000621152 NDUFB10O96000 172 aa24.4■■□□□ 1.5
SMC6-210ENST00000621152 CYP2C19P33261 490 aa24.4■■□□□ 1.5
SMC6-210ENST00000621152 STAT3P40763 770 aa24.4■■□□□ 1.5
SMC6-210ENST00000621152 MNX1P50219 401 aaPredicted RBP24.4■■□□□ 1.5
SMC6-210ENST00000621152 VPS53Q5VIR6 699 aa24.4■■□□□ 1.5
SMC6-210ENST00000621152 LHX8Q68G74 356 aa24.4■■□□□ 1.5
SMC6-210ENST00000621152 CHD1LQ86WJ1 897 aa24.4■■□□□ 1.5
SMC6-210ENST00000621152 FOXP2O15409 715 aa24.39■■□□□ 1.49
SMC6-210ENST00000621152 TTLL1O95922 423 aa24.39■■□□□ 1.49
SMC6-210ENST00000621152 CNGA1P29973 690 aa24.39■■□□□ 1.49
SMC6-210ENST00000621152 CTDSPL2Q05D32 466 aa24.39■■□□□ 1.49
SMC6-210ENST00000621152 MCMDC2Q4G0Z9 681 aa24.39■■□□□ 1.49
SMC6-210ENST00000621152 RILPL2Q969X0 211 aa24.39■■□□□ 1.49
SMC6-210ENST00000621152 FAM227BQ96M60 508 aa24.39■■□□□ 1.49
SMC6-210ENST00000621152 INCENPQ9NQS7 918 aa24.39■■□□□ 1.49
SMC6-210ENST00000621152 SLC5A4Q9NY91 659 aa24.39■■□□□ 1.49
SMC6-210ENST00000621152 RLFQ13129 1914 aa24.38■■□□□ 1.49
SMC6-210ENST00000621152 FCER1AP12319 257 aa24.38■■□□□ 1.49
SMC6-210ENST00000621152 NUCB1Q02818 461 aa24.38■■□□□ 1.49
SMC6-210ENST00000621152 RIOX2Q8IUF8 465 aa24.38■■□□□ 1.49
SMC6-210ENST00000621152 ABRAQ8N0Z2 381 aa24.38■■□□□ 1.49
SMC6-210ENST00000621152 SLF1Q9BQI6 1058 aa24.38■■□□□ 1.49
SMC6-210ENST00000621152 TICAM2Q86XR7 235 aa24.37■■□□□ 1.49
SMC6-210ENST00000621152 PRPF38AQ8NAV1 312 aaKnown RBP24.37■■□□□ 1.49
SMC6-210ENST00000621152 C11orf49Q9H6J7 331 aa24.37■■□□□ 1.49
SMC6-210ENST00000621152 ALX1Q15699 326 aa24.36■■□□□ 1.49
SMC6-210ENST00000621152 OLFML2BQ68BL8 750 aa24.36■■□□□ 1.49
SMC6-210ENST00000621152 PLEKHM2Q8IWE5 1019 aa24.36■■□□□ 1.49
SMC6-210ENST00000621152 LRRC47Q8N1G4 583 aaKnown RBP24.36■■□□□ 1.49
SMC6-210ENST00000621152 REPS2Q8NFH8 660 aa24.36■■□□□ 1.49
SMC6-210ENST00000621152 MMP19Q99542 508 aa24.36■■□□□ 1.49
SMC6-210ENST00000621152 A0A0D9SFI3 127 aa24.35■■□□□ 1.49
SMC6-210ENST00000621152 IGHA2P01877 340 aa24.35■■□□□ 1.49
SMC6-210ENST00000621152 NMIQ13287 307 aaPredicted RBP24.35■■□□□ 1.49
SMC6-210ENST00000621152 SLFN13Q68D06 897 aa24.35■■□□□ 1.49
SMC6-210ENST00000621152 CHRDL2Q6WN34 429 aa24.35■■□□□ 1.49
SMC6-210ENST00000621152 TRPV1Q8NER1 839 aa24.35■■□□□ 1.49
SMC6-210ENST00000621152 DDX20Q9UHI6 824 aaKnown RBP24.35■■□□□ 1.49
SMC6-210ENST00000621152 ZNF214Q9UL59 606 aaPredicted RBP24.35■■□□□ 1.49
SMC6-210ENST00000621152 CTDP1Q9Y5B0 961 aaPredicted RBP24.35■■□□□ 1.49
SMC6-210ENST00000621152 TSPY2A6NKD2 308 aa24.34■■□□□ 1.49
SMC6-210ENST00000621152 ZBED4O75132 1171 aa24.34■■□□□ 1.49
SMC6-210ENST00000621152 FGAP02671 866 aa24.34■■□□□ 1.49
SMC6-210ENST00000621152 SLC4A3P48751 1232 aa24.34■■□□□ 1.49
SMC6-210ENST00000621152 GMCL1P1Q8NEA9 526 aa24.34■■□□□ 1.49
SMC6-210ENST00000621152 KIFC2Q96AC6 838 aa24.34■■□□□ 1.49
SMC6-210ENST00000621152 ANAPC4Q9UJX5 808 aa24.34■■□□□ 1.49
SMC6-210ENST00000621152 SYNPO2Q9UMS6 1093 aa24.34■■□□□ 1.49
SMC6-210ENST00000621152 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.34■■□□□ 1.49
SMC6-210ENST00000621152 RANBP6O60518 1105 aaKnown RBP24.33■■□□□ 1.49
SMC6-210ENST00000621152 COPB2P35606 906 aa24.33■■□□□ 1.49
SMC6-210ENST00000621152 KCTD2Q14681 263 aa24.33■■□□□ 1.49
SMC6-210ENST00000621152 PRAMEF19Q5SWL8 479 aa24.33■■□□□ 1.49
SMC6-210ENST00000621152 CPXCR1Q8N123 301 aa24.33■■□□□ 1.49
SMC6-210ENST00000621152 CHMP4CQ96CF2 233 aa24.33■■□□□ 1.49
SMC6-210ENST00000621152 OSBPL3Q9H4L5 887 aa24.33■■□□□ 1.49
SMC6-210ENST00000621152 FEM1BQ9UK73 627 aa24.33■■□□□ 1.49
SMC6-210ENST00000621152 TACC3Q9Y6A5 838 aa24.33■■□□□ 1.49
SMC6-210ENST00000621152 GREB1LQ9C091 1923 aaPredicted RBP24.32■■□□□ 1.48
SMC6-210ENST00000621152 MSCO60682 206 aa24.32■■□□□ 1.48
SMC6-210ENST00000621152 PGK2P07205 417 aa24.32■■□□□ 1.48
SMC6-210ENST00000621152 HSPD1P10809 573 aaKnown RBP24.32■■□□□ 1.48
SMC6-210ENST00000621152 BMP3P12645 472 aa24.32■■□□□ 1.48
SMC6-210ENST00000621152 SDSP20132 328 aa24.32■■□□□ 1.48
SMC6-210ENST00000621152 MAML3Q96JK9 1138 aa24.32■■□□□ 1.48
SMC6-210ENST00000621152 IL17RBQ9NRM6 502 aa24.32■■□□□ 1.48
SMC6-210ENST00000621152 RIPK3Q9Y572 518 aa24.32■■□□□ 1.48
SMC6-210ENST00000621152 PLIN4Q96Q06 1357 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms