RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ERC2O15083 957 aa19.15■□□□□ 0.66
CD40-207ENST00000620709 ZFYP08048 801 aaPredicted RBP19.15■□□□□ 0.66
CD40-207ENST00000620709 GRB14Q14449 540 aa19.15■□□□□ 0.66
CD40-207ENST00000620709 NPLOC4Q8TAT6 608 aa19.15■□□□□ 0.66
CD40-207ENST00000620709 FSD1Q9BTV5 496 aa19.15■□□□□ 0.66
CD40-207ENST00000620709 GOPCQ9HD26 462 aa19.15■□□□□ 0.66
CD40-207ENST00000620709 WDR46O15213 610 aaKnown RBP19.15■□□□□ 0.66
CD40-207ENST00000620709 CDC45O75419 566 aa19.15■□□□□ 0.66
CD40-207ENST00000620709 ERCC3P19447 782 aa19.15■□□□□ 0.66
CD40-207ENST00000620709 CYP2C19P33261 490 aa19.15■□□□□ 0.66
CD40-207ENST00000620709 LRRFIP1Q32MZ4 808 aaKnown RBP19.15■□□□□ 0.66
CD40-207ENST00000620709 ALPK3Q96L96 1907 aa19.14■□□□□ 0.65
CD40-207ENST00000620709 SDSP20132 328 aa19.14■□□□□ 0.65
CD40-207ENST00000620709 ADORA2AP29274 412 aa19.14■□□□□ 0.65
CD40-207ENST00000620709 SBK1Q52WX2 424 aa19.14■□□□□ 0.65
CD40-207ENST00000620709 MB21D1Q8N884 522 aa19.14■□□□□ 0.65
CD40-207ENST00000620709 PI4K2BQ8TCG2 481 aa19.14■□□□□ 0.65
CD40-207ENST00000620709 ZMYND8Q9ULU4 1186 aaPredicted RBP19.14■□□□□ 0.65
CD40-207ENST00000620709 GNAT2P19087 354 aa19.13■□□□□ 0.65
CD40-207ENST00000620709 RASA1P20936 1047 aa19.13■□□□□ 0.65
CD40-207ENST00000620709 MNX1P50219 401 aaPredicted RBP19.13■□□□□ 0.65
CD40-207ENST00000620709 FAM83BQ5T0W9 1011 aa19.13■□□□□ 0.65
CD40-207ENST00000620709 GIMAP6Q6P9H5 292 aa19.13■□□□□ 0.65
CD40-207ENST00000620709 SEC62Q99442 399 aaKnown RBP19.13■□□□□ 0.65
CD40-207ENST00000620709 FBXO28Q9NVF7 368 aa19.13■□□□□ 0.65
CD40-207ENST00000620709 PCDH10Q9P2E7 1040 aa19.13■□□□□ 0.65
CD40-207ENST00000620709 RLFQ13129 1914 aa19.13■□□□□ 0.65
CD40-207ENST00000620709 RANBP2P49792 3224 aaKnown RBP19.12■□□□□ 0.65
CD40-207ENST00000620709 STRNO43815 780 aa19.12■□□□□ 0.65
CD40-207ENST00000620709 PRDM1O75626 825 aa19.12■□□□□ 0.65
CD40-207ENST00000620709 LHX8Q68G74 356 aa19.12■□□□□ 0.65
CD40-207ENST00000620709 ZNF444Q8N0Y2 327 aaPredicted RBP19.12■□□□□ 0.65
CD40-207ENST00000620709 SHCBP1Q8NEM2 672 aa19.12■□□□□ 0.65
CD40-207ENST00000620709 EPB41L4AQ9HCS5 686 aaPredicted RBP19.12■□□□□ 0.65
CD40-207ENST00000620709 EIF5BO60841 1220 aaKnown RBP19.11■□□□□ 0.65
CD40-207ENST00000620709 HOXC6P09630 235 aa19.11■□□□□ 0.65
CD40-207ENST00000620709 SYN1P17600 705 aa19.11■□□□□ 0.65
CD40-207ENST00000620709 NUP88Q99567 741 aaPredicted RBP19.11■□□□□ 0.65
CD40-207ENST00000620709 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.11■□□□□ 0.65
CD40-207ENST00000620709 MROH8Q9H579 483 aa19.11■□□□□ 0.65
CD40-207ENST00000620709 UPF2Q9HAU5 1272 aaKnown RBP19.11■□□□□ 0.65
CD40-207ENST00000620709 A0A0G2JMZ2 1700 aa19.11■□□□□ 0.65
CD40-207ENST00000620709 PATL2C9JE40 543 aaKnown RBP19.1■□□□□ 0.65
CD40-207ENST00000620709 TMEM132BQ14DG7 1078 aa19.1■□□□□ 0.65
CD40-207ENST00000620709 CASC1Q6TDU7 716 aa19.1■□□□□ 0.65
CD40-207ENST00000620709 IFNL3Q8IZI9 196 aa19.1■□□□□ 0.65
CD40-207ENST00000620709 NACAP1Q9BZK3 213 aa19.1■□□□□ 0.65
CD40-207ENST00000620709 SLC5A4Q9NY91 659 aa19.1■□□□□ 0.65
CD40-207ENST00000620709 CLIP2Q9UDT6 1046 aa19.1■□□□□ 0.65
CD40-207ENST00000620709 DDX20Q9UHI6 824 aaKnown RBP19.1■□□□□ 0.65
CD40-207ENST00000620709 TRIM6-TRIM34B2RNG4 842 aa19.1■□□□□ 0.65
CD40-207ENST00000620709 COBLO75128 1261 aa19.1■□□□□ 0.65
CD40-207ENST00000620709 MYCNP04198 464 aaPredicted RBP19.1■□□□□ 0.65
CD40-207ENST00000620709 FCER1AP12319 257 aa19.1■□□□□ 0.65
CD40-207ENST00000620709 SLC4A3P48751 1232 aa19.1■□□□□ 0.65
CD40-207ENST00000620709 ZNF287Q9HBT7 754 aa19.1■□□□□ 0.65
CD40-207ENST00000620709 COL11A1P12107 1806 aaPredicted RBP19.09■□□□□ 0.65
CD40-207ENST00000620709 PFASO15067 1338 aa19.09■□□□□ 0.65
CD40-207ENST00000620709 SEC24BO95487 1268 aa19.09■□□□□ 0.65
CD40-207ENST00000620709 ANO1Q5XXA6 986 aa19.09■□□□□ 0.65
CD40-207ENST00000620709 TRPV1Q8NER1 839 aa19.09■□□□□ 0.65
CD40-207ENST00000620709 MMP19Q99542 508 aa19.09■□□□□ 0.65
CD40-207ENST00000620709 NAPBQ9H115 298 aa19.09■□□□□ 0.65
CD40-207ENST00000620709 ISY1Q9ULR0 285 aaKnown RBP19.09■□□□□ 0.65
CD40-207ENST00000620709 PARP14Q460N5 1801 aa19.08■□□□□ 0.65
CD40-207ENST00000620709 ROBO3Q96MS0 1386 aa19.08■□□□□ 0.64
CD40-207ENST00000620709 SLC25A27O95847 323 aa19.08■□□□□ 0.64
CD40-207ENST00000620709 PRAMEF19Q5SWL8 479 aa19.08■□□□□ 0.64
CD40-207ENST00000620709 RILPL2Q969X0 211 aa19.08■□□□□ 0.64
CD40-207ENST00000620709 SENP6Q9GZR1 1112 aaPredicted RBP19.08■□□□□ 0.64
CD40-207ENST00000620709 PPP1R9AQ9ULJ8 1098 aa19.08■□□□□ 0.64
CD40-207ENST00000620709 CTDP1Q9Y5B0 961 aaPredicted RBP19.08■□□□□ 0.64
CD40-207ENST00000620709 FRMPD3Q5JV73 1810 aa19.07■□□□□ 0.64
CD40-207ENST00000620709 F5H6K3 240 aa19.07■□□□□ 0.64
CD40-207ENST00000620709 VWA5AO00534 786 aa19.07■□□□□ 0.64
CD40-207ENST00000620709 MSCO60682 206 aa19.07■□□□□ 0.64
CD40-207ENST00000620709 SLC3A2P08195 630 aaKnown RBP19.07■□□□□ 0.64
CD40-207ENST00000620709 STAT3P40763 770 aa19.07■□□□□ 0.64
CD40-207ENST00000620709 KLRC3Q07444 240 aa19.07■□□□□ 0.64
CD40-207ENST00000620709 OLFML2BQ68BL8 750 aa19.07■□□□□ 0.64
CD40-207ENST00000620709 CCDC129Q6ZRS4 1044 aa19.07■□□□□ 0.64
CD40-207ENST00000620709 SLF1Q9BQI6 1058 aa19.07■□□□□ 0.64
CD40-207ENST00000620709 NYAP2Q9P242 653 aa19.07■□□□□ 0.64
CD40-207ENST00000620709 ZNF236Q9UL36 1845 aa19.07■□□□□ 0.64
CD40-207ENST00000620709 NDUFB10O96000 172 aa19.06■□□□□ 0.64
CD40-207ENST00000620709 PGK2P07205 417 aa19.06■□□□□ 0.64
CD40-207ENST00000620709 TSPY3P0CV98 308 aa19.06■□□□□ 0.64
CD40-207ENST00000620709 TSPY8P0CW00 308 aa19.06■□□□□ 0.64
CD40-207ENST00000620709 CYBAP13498 195 aa19.06■□□□□ 0.64
CD40-207ENST00000620709 MFAP1P55081 439 aaKnown RBP19.06■□□□□ 0.64
CD40-207ENST00000620709 PDE4BQ07343 736 aa19.06■□□□□ 0.64
CD40-207ENST00000620709 KCTD2Q14681 263 aa19.06■□□□□ 0.64
CD40-207ENST00000620709 FAM47AQ5JRC9 791 aa19.06■□□□□ 0.64
CD40-207ENST00000620709 ZMYM1Q5SVZ6 1142 aa19.06■□□□□ 0.64
CD40-207ENST00000620709 RIOX2Q8IUF8 465 aa19.06■□□□□ 0.64
CD40-207ENST00000620709 LRRC47Q8N1G4 583 aaKnown RBP19.06■□□□□ 0.64
CD40-207ENST00000620709 CHMP4CQ96CF2 233 aa19.06■□□□□ 0.64
CD40-207ENST00000620709 PRO3102Q9H379 93 aa19.06■□□□□ 0.64
CD40-207ENST00000620709 ZNFX1Q9P2E3 1918 aaKnown RBP19.06■□□□□ 0.64
CD40-207ENST00000620709 MYH4Q9Y623 1939 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms