RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 SMIM5Q71RC9 77 aa10.01□□□□□ -0.81
CBWD1-228ENST00000619157 ZAR1Q86SH2 424 aa10.01□□□□□ -0.81
CBWD1-228ENST00000619157 LGR6Q9HBX8 967 aa10.01□□□□□ -0.81
CBWD1-228ENST00000619157 LRRC4CQ9HCJ2 640 aa10.01□□□□□ -0.81
CBWD1-228ENST00000619157 BSDC1Q9NW68 430 aaPredicted RBP10.01□□□□□ -0.81
CBWD1-228ENST00000619157 TMOD3Q9NYL9 352 aa10.01□□□□□ -0.81
CBWD1-228ENST00000619157 C5P01031 1676 aa10.01□□□□□ -0.81
CBWD1-228ENST00000619157 MRC1P22897 1456 aa10□□□□□ -0.81
CBWD1-228ENST00000619157 QSER1Q2KHR3 1735 aa10□□□□□ -0.81
CBWD1-228ENST00000619157 ERVV-2B6SEH9 535 aa10□□□□□ -0.81
CBWD1-228ENST00000619157 U2SURPO15042 1029 aaKnown RBP10□□□□□ -0.81
CBWD1-228ENST00000619157 PHACTR3Q96KR7 559 aa10□□□□□ -0.81
CBWD1-228ENST00000619157 LATS2Q9NRM7 1088 aa10□□□□□ -0.81
CBWD1-228ENST00000619157 TAF1LQ8IZX4 1826 aa10□□□□□ -0.81
CBWD1-228ENST00000619157 SCN11AQ9UI33 1791 aa9.99□□□□□ -0.81
CBWD1-228ENST00000619157 ESRRAP11474 423 aaPredicted RBP9.99□□□□□ -0.81
CBWD1-228ENST00000619157 ITGB5P18084 799 aa9.99□□□□□ -0.81
CBWD1-228ENST00000619157 TMEM132AQ24JP5 1023 aa9.99□□□□□ -0.81
CBWD1-228ENST00000619157 AKAP4Q5JQC9 854 aa9.99□□□□□ -0.81
CBWD1-228ENST00000619157 EXOSC6Q5RKV6 272 aaKnown RBP9.99□□□□□ -0.81
CBWD1-228ENST00000619157 POU5F2Q8N7G0 328 aa9.99□□□□□ -0.81
CBWD1-228ENST00000619157 LINC00116Q8NCU8 138 aa9.99□□□□□ -0.81
CBWD1-228ENST00000619157 HELQQ8TDG4 1101 aa9.99□□□□□ -0.81
CBWD1-228ENST00000619157 C4BP0C0L5 1744 aa9.99□□□□□ -0.81
CBWD1-228ENST00000619157 METTL12A8MUP2 240 aa9.98□□□□□ -0.81
CBWD1-228ENST00000619157 RNMTO43148 476 aaKnown RBP9.98□□□□□ -0.81
CBWD1-228ENST00000619157 HSP90AB1P08238 724 aaKnown RBP9.98□□□□□ -0.81
CBWD1-228ENST00000619157 RAB6AP20340 208 aa9.98□□□□□ -0.81
CBWD1-228ENST00000619157 MPSTP25325 297 aa9.98□□□□□ -0.81
CBWD1-228ENST00000619157 PRKAR2BP31323 418 aa9.98□□□□□ -0.81
CBWD1-228ENST00000619157 SOX4Q06945 474 aaPredicted RBP9.98□□□□□ -0.81
CBWD1-228ENST00000619157 NOM1Q5C9Z4 860 aaKnown RBP9.98□□□□□ -0.81
CBWD1-228ENST00000619157 COL23A1Q86Y22 540 aaPredicted RBP9.98□□□□□ -0.81
CBWD1-228ENST00000619157 SMARCC1Q92922 1105 aaPredicted RBP9.98□□□□□ -0.81
CBWD1-228ENST00000619157 PMEPA1Q969W9 287 aa9.98□□□□□ -0.81
CBWD1-228ENST00000619157 SPON1Q9HCB6 807 aa9.98□□□□□ -0.81
CBWD1-228ENST00000619157 PAK6Q9NQU5 681 aaPredicted RBP9.98□□□□□ -0.81
CBWD1-228ENST00000619157 COL24A1Q17RW2 1714 aa9.98□□□□□ -0.81
CBWD1-228ENST00000619157 GOLGB1Q14789 3259 aaKnown RBP9.98□□□□□ -0.81
CBWD1-228ENST00000619157 PHACTR2O75167 634 aa9.97□□□□□ -0.81
CBWD1-228ENST00000619157 MZF1P28698 734 aaPredicted RBP9.97□□□□□ -0.81
CBWD1-228ENST00000619157 EIF1AXP47813 144 aaKnown RBP9.97□□□□□ -0.81
CBWD1-228ENST00000619157 C1orf141Q5JVX7 400 aa9.97□□□□□ -0.81
CBWD1-228ENST00000619157 IL17REQ8NFR9 667 aa9.97□□□□□ -0.81
CBWD1-228ENST00000619157 GATA6Q92908 595 aa9.97□□□□□ -0.81
CBWD1-228ENST00000619157 SOX17Q9H6I2 414 aaPredicted RBP9.97□□□□□ -0.81
CBWD1-228ENST00000619157 FOXD3Q9UJU5 478 aaPredicted RBP9.97□□□□□ -0.81
CBWD1-228ENST00000619157 POLIQ9UNA4 740 aa9.97□□□□□ -0.81
CBWD1-228ENST00000619157 KCPQ6ZWJ8 1503 aa9.97□□□□□ -0.81
CBWD1-228ENST00000619157 NFICP08651 508 aa9.96□□□□□ -0.82
CBWD1-228ENST00000619157 ADH5P11766 374 aa9.96□□□□□ -0.82
CBWD1-228ENST00000619157 EZH1Q92800 747 aaPredicted RBP9.96□□□□□ -0.82
CBWD1-228ENST00000619157 CFAP53Q96M91 514 aa9.96□□□□□ -0.82
CBWD1-228ENST00000619157 YIPF2Q9BWQ6 316 aa9.96□□□□□ -0.82
CBWD1-228ENST00000619157 MTFR1LQ9H019 292 aa9.96□□□□□ -0.82
CBWD1-228ENST00000619157 SLC52A2Q9HAB3 445 aa9.96□□□□□ -0.82
CBWD1-228ENST00000619157 TFCP2L1Q9NZI6 479 aa9.96□□□□□ -0.82
CBWD1-228ENST00000619157 ZC3H7BQ9UGR2 993 aaKnown RBP9.96□□□□□ -0.82
CBWD1-228ENST00000619157 ACTL7BQ9Y614 415 aa9.96□□□□□ -0.82
CBWD1-228ENST00000619157 ZNF831Q5JPB2 1677 aa9.96□□□□□ -0.82
CBWD1-228ENST00000619157 COL5A3P25940 1745 aaPredicted RBP9.96□□□□□ -0.82
CBWD1-228ENST00000619157 TJP1Q07157 1748 aa9.96□□□□□ -0.82
CBWD1-228ENST00000619157 UBR3Q6ZT12 1888 aa9.96□□□□□ -0.82
CBWD1-228ENST00000619157 TNFRSF21O75509 655 aa9.95□□□□□ -0.82
CBWD1-228ENST00000619157 U2AF1L5P0DN76 240 aaPredicted RBP9.95□□□□□ -0.82
CBWD1-228ENST00000619157 EDN3P14138 238 aa9.95□□□□□ -0.82
CBWD1-228ENST00000619157 ZEB1P37275 1124 aaPredicted RBP9.95□□□□□ -0.82
CBWD1-228ENST00000619157 U2AF1Q01081 240 aaKnown RBP eCLIP9.95□□□□□ -0.82
CBWD1-228ENST00000619157 SLC39A6Q13433 755 aa9.95□□□□□ -0.82
CBWD1-228ENST00000619157 MTMR3Q13615 1198 aa9.95□□□□□ -0.82
CBWD1-228ENST00000619157 ZNF765Q7L2R6 523 aa9.95□□□□□ -0.82
CBWD1-228ENST00000619157 BHLHE41Q9C0J9 482 aaPredicted RBP9.95□□□□□ -0.82
CBWD1-228ENST00000619157 CEMIPQ8WUJ3 1361 aa9.95□□□□□ -0.82
CBWD1-228ENST00000619157 MAP3K5Q99683 1374 aa9.95□□□□□ -0.82
CBWD1-228ENST00000619157 CICQ96RK0 1608 aaPredicted RBP9.95□□□□□ -0.82
CBWD1-228ENST00000619157 VIRMAQ69YN4 1812 aaKnown RBP9.94□□□□□ -0.82
CBWD1-228ENST00000619157 SIPA1L3O60292 1781 aaPredicted RBP9.94□□□□□ -0.82
CBWD1-228ENST00000619157 CTSBP07858 339 aa9.94□□□□□ -0.82
CBWD1-228ENST00000619157 JUNBP17275 347 aaPredicted RBP9.94□□□□□ -0.82
CBWD1-228ENST00000619157 PLEKHF1Q96S99 279 aa9.94□□□□□ -0.82
CBWD1-228ENST00000619157 RALBP1Q15311 655 aa9.93□□□□□ -0.82
CBWD1-228ENST00000619157 PEAR1Q5VY43 1037 aaPredicted RBP9.93□□□□□ -0.82
CBWD1-228ENST00000619157 DUSP27Q5VZP5 1158 aa9.93□□□□□ -0.82
CBWD1-228ENST00000619157 ZNF574Q6ZN55 896 aaPredicted RBP9.93□□□□□ -0.82
CBWD1-228ENST00000619157 AGBL5Q8NDL9 886 aa9.93□□□□□ -0.82
CBWD1-228ENST00000619157 NRSN2Q9GZP1 204 aa9.93□□□□□ -0.82
CBWD1-228ENST00000619157 PRKRIP1Q9H875 184 aaPredicted RBP9.93□□□□□ -0.82
CBWD1-228ENST00000619157 NUDCQ9Y266 331 aa9.93□□□□□ -0.82
CBWD1-228ENST00000619157 MYH14Q7Z406 1995 aaKnown RBP9.93□□□□□ -0.82
CBWD1-228ENST00000619157 UBR2Q8IWV8 1755 aa9.93□□□□□ -0.82
CBWD1-228ENST00000619157 MYBBP1AQ9BQG0 1328 aaKnown RBP9.92□□□□□ -0.82
CBWD1-228ENST00000619157 GNAT3A8MTJ3 354 aa9.92□□□□□ -0.82
CBWD1-228ENST00000619157 DCTN1Q14203 1278 aa9.92□□□□□ -0.82
CBWD1-228ENST00000619157 ZNF648Q5T619 568 aaPredicted RBP9.92□□□□□ -0.82
CBWD1-228ENST00000619157 SNX29Q8TEQ0 813 aa9.92□□□□□ -0.82
CBWD1-228ENST00000619157 CNTNAP4Q9C0A0 1308 aa9.91□□□□□ -0.82
CBWD1-228ENST00000619157 KCNQ3O43525 872 aa9.91□□□□□ -0.82
CBWD1-228ENST00000619157 PAPLNO95428 1278 aa9.91□□□□□ -0.82
CBWD1-228ENST00000619157 MAOBP27338 520 aa9.91□□□□□ -0.82
CBWD1-228ENST00000619157 DYMQ7RTS9 669 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms