RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 LRP5O75197 1615 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 SEC31AO94979 1220 aaKnown RBP7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 CCDC175P0C221 793 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 CYP2C19P33261 490 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 KARSQ15046 597 aaKnown RBP7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 STYK1Q6J9G0 422 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 AMOTL1Q8IY63 956 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 TBC1D22AQ8WUA7 517 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 COA1Q9GZY4 146 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 EPB41L4AQ9HCS5 686 aaPredicted RBP7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 GPHNQ9NQX3 736 aaPredicted RBP7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 USP17L12C9JPN9 530 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 USP17L21D6R901 530 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 ATP1A3P13637 1013 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 IRX5P78411 483 aaPredicted RBP7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 AKAP17AQ02040 695 aaKnown RBP7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 TSR1Q2NL82 804 aaKnown RBP7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 TBC1D10CQ8IV04 446 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 RNF41Q9H4P4 317 aaPredicted RBP7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 MCM9Q9NXL9 1143 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 ERICH2A1L162 156 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 IFIT3O14879 490 aaKnown RBP7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 RANBP6O60518 1105 aaKnown RBP7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 ABL1P00519 1130 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 IARSP41252 1262 aaKnown RBP7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 ZSCAN26Q16670 478 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 AKNAD1Q5T1N1 836 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 MICU3Q86XE3 530 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 SLF2Q8IX21 1173 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 TRIM22Q8IYM9 498 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 TTLL6Q8N841 843 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 WASF1Q92558 559 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 RASSF4Q9H2L5 321 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 KCND1Q9NSA2 647 aa7.91□□□□□ -1.14
SRGAP3-213ENST00000618999 CYP2D7A0A087X1C5 515 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 PRDM1O75626 825 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 ADD1P35611 737 aaKnown RBP7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 RBM5P52756 815 aaKnown RBP eCLIP7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 PPARAQ07869 468 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 ALX1Q15699 326 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 GRIK5Q16478 980 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 CEP112Q8N8E3 955 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 ZKSCAN3Q9BRR0 538 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 RIOK1Q9BRS2 568 aaKnown RBP7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 TNRC6CQ9HCJ0 1690 aaKnown RBP7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 PES1O00541 588 aaKnown RBP7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 IVLP07476 585 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 PNOCQ13519 176 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 SART3Q15020 963 aaKnown RBP7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 TMEM67Q5HYA8 995 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 C15orf52Q6ZUT6 534 aaKnown RBP7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 NBPF11Q86T75 865 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 CPLX3Q8WVH0 158 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 KRT23Q9C075 422 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 CNNM2Q9H8M5 875 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 CREBZFQ9NS37 354 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 TTF2Q9UNY4 1162 aaKnown RBP7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 COL24A1Q17RW2 1714 aa7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 COL1A1P02452 1464 aaPredicted RBP7.9□□□□□ -1.14
SRGAP3-213ENST00000618999 GOLGA8AA7E2F4 631 aa7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 TADA3O75528 432 aa7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 CTDNEP1O95476 244 aa7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 IL1R1P14778 569 aa7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 CLK2P49760 499 aaKnown RBP7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 CHMP4BP1P59074 171 aa7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 EXOSC10Q01780 885 aaKnown RBP7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 CERS3Q8IU89 383 aa7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 ZNF384Q8TF68 577 aa7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 RABGGTAQ92696 567 aa7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 UBAC1Q9BSL1 405 aa7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 VRTNQ9H8Y1 702 aa7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 LZTFL1Q9NQ48 299 aa7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 FANCLQ9NW38 375 aa7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 KCNH3Q9ULD8 1083 aa7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 FHOD1Q9Y613 1164 aa7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 PDS5AQ29RF7 1337 aaKnown RBP7.9□□□□□ -1.15
SRGAP3-213ENST00000618999 PPIP5K2O43314 1243 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 DPEP1P16444 411 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 CAPN2P17655 700 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 SLC39A14Q15043 492 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 SPECC1LQ69YQ0 1117 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 KLHL10Q6JEL2 608 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 VSTM4Q8IW00 320 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 C10orf67Q8IYJ2 551 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 TGFBRAP1Q8WUH2 860 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 MXD3Q9BW11 206 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 VPS18Q9P253 973 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 LAMB2P55268 1798 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 STX10O60499 249 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 RFC5P40937 340 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 BTDP43251 543 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 SCNN1DP51172 638 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 TUBB4BP68371 445 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 GOLGA8FQ08AF8 430 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 GOLGA8DPQ0D2H9 430 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 CCDC70Q6NSX1 233 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 MAPKAPK5Q8IW41 473 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 MB21D2Q8IYB1 491 aaPredicted RBP7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 TEX11Q8IYF3 940 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 ZNF446Q9NWS9 450 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms