RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 DCAF17Q5H9S7 520 aaPredicted RBP15.52■□□□□ 0.08
CNOT3-210ENST00000618939 NBPF11Q86T75 865 aa15.52■□□□□ 0.08
CNOT3-210ENST00000618939 STAG1Q8WVM7 1258 aa15.52■□□□□ 0.08
CNOT3-210ENST00000618939 LMBR1Q8WVP7 490 aa15.52■□□□□ 0.08
CNOT3-210ENST00000618939 PRPF3O43395 683 aaKnown RBP15.52■□□□□ 0.07
CNOT3-210ENST00000618939 CDC27P30260 824 aa15.52■□□□□ 0.07
CNOT3-210ENST00000618939 COPB1P53618 953 aaKnown RBP15.52■□□□□ 0.07
CNOT3-210ENST00000618939 SEPT7Q16181 437 aaKnown RBP15.52■□□□□ 0.07
CNOT3-210ENST00000618939 HERC4Q5GLZ8 1057 aaPredicted RBP15.52■□□□□ 0.07
CNOT3-210ENST00000618939 GLT8D2Q9H1C3 349 aa15.52■□□□□ 0.07
CNOT3-210ENST00000618939 STK36Q9NRP7 1315 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 CETN3O15182 167 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 HAUS3Q68CZ6 603 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 FAM207AQ9NSI2 230 aaPredicted RBP15.51■□□□□ 0.07
CNOT3-210ENST00000618939 MAPK8IP2Q13387 824 aaPredicted RBP15.51■□□□□ 0.07
CNOT3-210ENST00000618939 KIAA0753Q2KHM9 967 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 RNF187Q5TA31 235 aaPredicted RBP15.51■□□□□ 0.07
CNOT3-210ENST00000618939 GPIHBP1Q8IV16 184 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 LY9Q9HBG7 655 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 OAS2P29728 719 aaKnown RBP15.51■□□□□ 0.07
CNOT3-210ENST00000618939 NEK8Q86SG6 692 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 PHLPP2Q6ZVD8 1323 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 GOLGA6L7A0A1B0GV03 622 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 TECP42680 631 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 BRD3Q15059 726 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 ALX1Q15699 326 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 RASGRP4Q8TDF6 673 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 IFT81Q8WYA0 676 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 EPSTI1Q96J88 318 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 RIPOR2Q9Y4F9 1068 aa15.51■□□□□ 0.07
CNOT3-210ENST00000618939 COBLO75128 1261 aa15.5■□□□□ 0.07
CNOT3-210ENST00000618939 WHAMMP3Q1A5X7 153 aa15.5■□□□□ 0.07
CNOT3-210ENST00000618939 SLC9C1Q4G0N8 1177 aa15.5■□□□□ 0.07
CNOT3-210ENST00000618939 GSTTP1A0A1W2PQM5 241 aa15.5■□□□□ 0.07
CNOT3-210ENST00000618939 CYP19A1P11511 503 aaPredicted RBP15.5■□□□□ 0.07
CNOT3-210ENST00000618939 SLC1A4P43007 532 aa15.5■□□□□ 0.07
CNOT3-210ENST00000618939 OGFOD1Q8N543 542 aa15.5■□□□□ 0.07
CNOT3-210ENST00000618939 CTNNBL1Q8WYA6 563 aaPredicted RBP15.5■□□□□ 0.07
CNOT3-210ENST00000618939 BPIFA3Q9BQP9 254 aa15.5■□□□□ 0.07
CNOT3-210ENST00000618939 CCDC174Q6PII3 467 aa15.5■□□□□ 0.07
CNOT3-210ENST00000618939 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.5■□□□□ 0.07
CNOT3-210ENST00000618939 SAR1BQ9Y6B6 198 aa15.5■□□□□ 0.07
CNOT3-210ENST00000618939 KIF28PB7ZC32 967 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 TNNC1P63316 161 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 SMC1AQ14683 1233 aaKnown RBP15.49■□□□□ 0.07
CNOT3-210ENST00000618939 OSBPL5Q9H0X9 879 aaPredicted RBP15.49■□□□□ 0.07
CNOT3-210ENST00000618939 KCNF1Q9H3M0 494 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 HAUS4Q9H6D7 363 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 EPN1Q9Y6I3 576 aaPredicted RBP15.49■□□□□ 0.07
CNOT3-210ENST00000618939 VWA3BQ502W6 1294 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 DHX40Q8IX18 779 aaKnown RBP15.49■□□□□ 0.07
CNOT3-210ENST00000618939 EEF2KMTQ96G04 330 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 NOX5Q96PH1 765 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 UIMC1Q96RL1 719 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 TBC1D7Q9P0N9 293 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 PCDHA4Q9UN74 947 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 BTDP43251 543 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 GTF2IP78347 998 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 RBL2Q08999 1139 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 IQCB1Q15051 598 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 TYW1BQ6NUM6 668 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 C8orf74Q6P047 294 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 SGMS1Q86VZ5 419 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 C2CD5Q86YS7 1000 aa15.49■□□□□ 0.07
CNOT3-210ENST00000618939 IFIH1Q9BYX4 1025 aaKnown RBP15.49■□□□□ 0.07
CNOT3-210ENST00000618939 UBN2Q6ZU65 1347 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 GCOM1H8Y6P7 765 aaPredicted RBP15.48■□□□□ 0.07
CNOT3-210ENST00000618939 PLEKHA8P1O95397 391 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 MYZAPP0CAP1 466 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 RRAGAQ7L523 313 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 NELFCDQ8IXH7 590 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 IQCDQ96DY2 449 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 PLA2G12BQ9BX93 195 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 HDAC9Q9UKV0 1011 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 ZNF335Q9H4Z2 1342 aaPredicted RBP15.48■□□□□ 0.07
CNOT3-210ENST00000618939 CDC25AP30304 524 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 NCBP1Q09161 790 aaKnown RBP15.48■□□□□ 0.07
CNOT3-210ENST00000618939 RAD51AP2Q09MP3 1159 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 FAM76AQ8TAV0 307 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 PSMB7Q99436 277 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 PARP3Q9Y6F1 533 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 EPB41P11171 864 aaKnown RBP15.48■□□□□ 0.07
CNOT3-210ENST00000618939 PRPHP41219 470 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 DNAJC21Q5F1R6 531 aaKnown RBP15.48■□□□□ 0.07
CNOT3-210ENST00000618939 CFAP58Q5T655 872 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 PPP4R3AQ6IN85 833 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 RABGGTAQ92696 567 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 PAGE5Q96GU1 130 aa15.48■□□□□ 0.07
CNOT3-210ENST00000618939 KCNQ4P56696 695 aa15.47■□□□□ 0.07
CNOT3-210ENST00000618939 CDC23Q9UJX2 597 aa15.47■□□□□ 0.07
CNOT3-210ENST00000618939 GSG1L2A8MUP6 293 aa15.47■□□□□ 0.07
CNOT3-210ENST00000618939 BRIP1Q9BX63 1249 aa15.47■□□□□ 0.07
CNOT3-210ENST00000618939 NLRC4Q9NPP4 1024 aa15.47■□□□□ 0.07
CNOT3-210ENST00000618939 NCAPH2Q6IBW4 605 aa15.47■□□□□ 0.07
CNOT3-210ENST00000618939 MTA3Q9BTC8 594 aa15.47■□□□□ 0.07
CNOT3-210ENST00000618939 BSDC1Q9NW68 430 aaPredicted RBP15.47■□□□□ 0.07
CNOT3-210ENST00000618939 AK9Q5TCS8 1911 aa15.47■□□□□ 0.07
CNOT3-210ENST00000618939 CTDNEP1O95476 244 aa15.47■□□□□ 0.07
CNOT3-210ENST00000618939 ATP2B4P23634 1241 aa15.47■□□□□ 0.07
CNOT3-210ENST00000618939 MECOMQ03112 1051 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms