RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PDE6AP16499 860 aa16.44■□□□□ 0.22
COL5A1-208ENST00000618395 STX1BP61266 288 aa16.44■□□□□ 0.22
COL5A1-208ENST00000618395 NNTQ13423 1086 aa16.44■□□□□ 0.22
COL5A1-208ENST00000618395 PARVBQ9HBI1 364 aa16.44■□□□□ 0.22
COL5A1-208ENST00000618395 HMGB2P26583 209 aaKnown RBP16.44■□□□□ 0.22
COL5A1-208ENST00000618395 DPH6Q7L8W6 267 aa16.44■□□□□ 0.22
COL5A1-208ENST00000618395 CD2APQ9Y5K6 639 aa16.44■□□□□ 0.22
COL5A1-208ENST00000618395 NFE2L3Q9Y4A8 694 aa16.44■□□□□ 0.22
COL5A1-208ENST00000618395 ADCY8P40145 1251 aa16.44■□□□□ 0.22
COL5A1-208ENST00000618395 CASP8Q14790 479 aa16.44■□□□□ 0.22
COL5A1-208ENST00000618395 LRMPQ12912 555 aa16.44■□□□□ 0.22
COL5A1-208ENST00000618395 KCNH3Q9ULD8 1083 aa16.44■□□□□ 0.22
COL5A1-208ENST00000618395 MAFGO15525 162 aa16.44■□□□□ 0.22
COL5A1-208ENST00000618395 ANO5Q75V66 913 aa16.44■□□□□ 0.22
COL5A1-208ENST00000618395 ANKRD35Q8N283 1001 aa16.44■□□□□ 0.22
COL5A1-208ENST00000618395 PPP2R5DQ14738 602 aa16.44■□□□□ 0.22
COL5A1-208ENST00000618395 MUM1L1Q5H9M0 696 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 WDR44Q5JSH3 913 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 KRT79Q5XKE5 535 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 THAP11Q96EK4 314 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 LRRC2Q9BYS8 371 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 ANKRD2Q9GZV1 360 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 SEPT3Q9UH03 358 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 H0Y3Z8 333 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 TYW1BQ6NUM6 668 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 TRIM56Q9BRZ2 755 aaKnown RBP16.43■□□□□ 0.22
COL5A1-208ENST00000618395 FBXO38Q6PIJ6 1188 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 GID8Q9NWU2 228 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 CAB39Q9Y376 341 aaPredicted RBP16.43■□□□□ 0.22
COL5A1-208ENST00000618395 PASKQ96RG2 1323 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 EXOC5O00471 708 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 C2CD5Q86YS7 1000 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 HAUS2Q9NVX0 235 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 TMCC1O94876 653 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 DRP2Q13474 957 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 VAT1LQ9HCJ6 419 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 TSHZ3Q63HK5 1081 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 RNF207Q6ZRF8 634 aa16.43■□□□□ 0.22
COL5A1-208ENST00000618395 BCRP11274 1271 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 GNAQP50148 359 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 BBOF1Q8ND07 529 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 SUPT3HO75486 399 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 STAT2P52630 851 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 DMPKQ09013 629 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 KLHL30Q0D2K2 578 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 ATG16L1Q676U5 607 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 SNX5Q9Y5X3 404 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 LRRC8BQ6P9F7 803 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 HDDC2Q7Z4H3 204 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 OR8K1Q8NGG5 319 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 DESI2Q9BSY9 194 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 NDEL1Q9GZM8 345 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 LRRIQ3A6PVS8 624 aaPredicted RBP16.42■□□□□ 0.22
COL5A1-208ENST00000618395 SERPINB1P30740 379 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 SLFN14P0C7P3 912 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 SRLQ86TD4 932 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 SCG2P13521 617 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 EIF3BP55884 814 aaKnown RBP16.42■□□□□ 0.22
COL5A1-208ENST00000618395 SV2BQ7L1I2 683 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 TRMT1LQ7Z2T5 733 aaKnown RBP16.42■□□□□ 0.22
COL5A1-208ENST00000618395 ASCC2Q9H1I8 757 aaPredicted RBP16.42■□□□□ 0.22
COL5A1-208ENST00000618395 TMEM191CA6NGB0 347 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 TMEM191BP0C7N4 346 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 POSTNQ15063 836 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 HORMAD1Q86X24 394 aa16.42■□□□□ 0.22
COL5A1-208ENST00000618395 PHF23Q9BUL5 403 aaPredicted RBP16.42■□□□□ 0.22
COL5A1-208ENST00000618395 STX18Q9P2W9 335 aaKnown RBP16.42■□□□□ 0.22
COL5A1-208ENST00000618395 SLC5A1P13866 664 aa16.41■□□□□ 0.22
COL5A1-208ENST00000618395 ZBTB22O15209 634 aa16.41■□□□□ 0.22
COL5A1-208ENST00000618395 CALUO43852 315 aaPredicted RBP16.41■□□□□ 0.22
COL5A1-208ENST00000618395 BTN2A1Q7KYR7 527 aa16.41■□□□□ 0.22
COL5A1-208ENST00000618395 DACH2Q96NX9 599 aa16.41■□□□□ 0.22
COL5A1-208ENST00000618395 HAUS4Q9H6D7 363 aa16.41■□□□□ 0.22
COL5A1-208ENST00000618395 TMEM63CQ9P1W3 806 aa16.41■□□□□ 0.22
COL5A1-208ENST00000618395 PDE6BP35913 854 aa16.41■□□□□ 0.22
COL5A1-208ENST00000618395 ADCY3O60266 1144 aa16.41■□□□□ 0.22
COL5A1-208ENST00000618395 PLCD1P51178 756 aa16.41■□□□□ 0.22
COL5A1-208ENST00000618395 DONSONQ9NYP3 566 aa16.41■□□□□ 0.22
COL5A1-208ENST00000618395 MCMDC2Q4G0Z9 681 aa16.41■□□□□ 0.22
COL5A1-208ENST00000618395 ECE1P42892 770 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 INAQ16352 499 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 SLF2Q8IX21 1173 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 TRIML1Q8N9V2 468 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 ARHGAP26Q9UNA1 814 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 VWA3AA6NCI4 1184 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 GUCY1A3Q02108 690 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 HP1BP3Q5SSJ5 553 aaPredicted RBP16.4■□□□□ 0.22
COL5A1-208ENST00000618395 RINLQ6ZS11 566 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 C6orf50Q9HD87 102 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 PTPDC1A2A3K4 754 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 H0Y626 953 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 TSPAN9O75954 239 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 TRIM16O95361 564 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 INHBAP08476 426 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 PYGBP11216 843 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 LLPHQ9BRT6 129 aaKnown RBP16.4■□□□□ 0.22
COL5A1-208ENST00000618395 PDE1AP54750 535 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 JPH4Q96JJ6 628 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 SCYL1Q96KG9 808 aa16.4■□□□□ 0.22
COL5A1-208ENST00000618395 RAD23BP54727 409 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms