RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 GMCL1Q96IK5 515 aa18.26■□□□□ 0.51
PCDHGC3-204ENST00000617222 USP17L15C9J2P7 530 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 USP17L13C9JLJ4 530 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 USP17L11C9JVI0 530 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 USP17L18D6R9N7 530 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 USP17L22D6RA61 530 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 USP17L17D6RBQ6 530 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 USP17L19D6RCP7 530 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 USP17L20D6RJB6 530 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 IGF2BP3O00425 579 aaKnown RBP eCLIP18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 SNHG28P0DPA3 235 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 RXRAP19793 462 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 USP17L24Q0WX57 530 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 TROAPQ12815 778 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 ANKRD1Q15327 319 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 NOL8Q76FK4 1167 aaKnown RBP18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 IFNL1Q8IU54 200 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 REM2Q8IYK8 340 aaPredicted RBP18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 DNAJC5GQ8N7S2 189 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 TANGO6Q9C0B7 1094 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 GPCPD1Q9NPB8 672 aa18.25■□□□□ 0.51
PCDHGC3-204ENST00000617222 FRMPD2Q68DX3 1309 aaPredicted RBP18.24■□□□□ 0.51
PCDHGC3-204ENST00000617222 PDHXO00330 501 aa18.24■□□□□ 0.51
PCDHGC3-204ENST00000617222 DDAH1O94760 285 aa18.24■□□□□ 0.51
PCDHGC3-204ENST00000617222 PARP1P09874 1014 aaKnown RBP18.24■□□□□ 0.51
PCDHGC3-204ENST00000617222 GOLGA8HP0CJ92 632 aa18.24■□□□□ 0.51
PCDHGC3-204ENST00000617222 HOXA7P31268 230 aaPredicted RBP18.24■□□□□ 0.51
PCDHGC3-204ENST00000617222 ZNF543Q08ER8 600 aa18.24■□□□□ 0.51
PCDHGC3-204ENST00000617222 PABPC4Q13310 644 aaKnown RBP eCLIP18.24■□□□□ 0.51
PCDHGC3-204ENST00000617222 OTUD7BQ6GQQ9 843 aa18.24■□□□□ 0.51
PCDHGC3-204ENST00000617222 APOA5Q6Q788 366 aa18.24■□□□□ 0.51
PCDHGC3-204ENST00000617222 CATSPERGQ6ZRH7 1159 aa18.24■□□□□ 0.51
PCDHGC3-204ENST00000617222 MICU3Q86XE3 530 aa18.24■□□□□ 0.51
PCDHGC3-204ENST00000617222 TMEM232C9JQI7 657 aa18.23■□□□□ 0.51
PCDHGC3-204ENST00000617222 ZBTB43O43298 467 aa18.23■□□□□ 0.51
PCDHGC3-204ENST00000617222 OSBPP22059 807 aa18.23■□□□□ 0.51
PCDHGC3-204ENST00000617222 EVCP57679 992 aa18.23■□□□□ 0.51
PCDHGC3-204ENST00000617222 GRM4Q14833 912 aa18.23■□□□□ 0.51
PCDHGC3-204ENST00000617222 TTBK2Q6IQ55 1244 aa18.23■□□□□ 0.51
PCDHGC3-204ENST00000617222 SAMD1Q6SPF0 538 aaPredicted RBP18.23■□□□□ 0.51
PCDHGC3-204ENST00000617222 CCDC144CPQ8IYA2 1237 aa18.23■□□□□ 0.51
PCDHGC3-204ENST00000617222 FBXO28Q9NVF7 368 aa18.23■□□□□ 0.51
PCDHGC3-204ENST00000617222 TPCN1Q9ULQ1 816 aa18.23■□□□□ 0.51
PCDHGC3-204ENST00000617222 GOLGA8BA8MQT2 603 aa18.22■□□□□ 0.51
PCDHGC3-204ENST00000617222 ST18O60284 1047 aa18.22■□□□□ 0.51
PCDHGC3-204ENST00000617222 FLOT1O75955 427 aa18.22■□□□□ 0.51
PCDHGC3-204ENST00000617222 CALM1P0DP23 149 aa18.22■□□□□ 0.51
PCDHGC3-204ENST00000617222 CALM2P0DP24 149 aa18.22■□□□□ 0.51
PCDHGC3-204ENST00000617222 CALM3P0DP25 149 aa18.22■□□□□ 0.51
PCDHGC3-204ENST00000617222 PDIA3P30101 505 aaKnown RBP18.22■□□□□ 0.51
PCDHGC3-204ENST00000617222 IRX3P78415 501 aaPredicted RBP18.22■□□□□ 0.51
PCDHGC3-204ENST00000617222 STAG2Q8N3U4 1231 aa18.22■□□□□ 0.51
PCDHGC3-204ENST00000617222 FANCBQ8NB91 859 aa18.22■□□□□ 0.51
PCDHGC3-204ENST00000617222 P2RX7Q99572 595 aaKnown RBP18.22■□□□□ 0.51
PCDHGC3-204ENST00000617222 ASCC2Q9H1I8 757 aaPredicted RBP18.22■□□□□ 0.51
PCDHGC3-204ENST00000617222 MAD2L2Q9UI95 211 aa18.22■□□□□ 0.51
PCDHGC3-204ENST00000617222 FEM1BQ9UK73 627 aa18.22■□□□□ 0.51
PCDHGC3-204ENST00000617222 SLC45A1Q9Y2W3 748 aa18.22■□□□□ 0.51
PCDHGC3-204ENST00000617222 PALM3A6NDB9 673 aaPredicted RBP18.21■□□□□ 0.51
PCDHGC3-204ENST00000617222 GOLGA8AA7E2F4 631 aa18.21■□□□□ 0.51
PCDHGC3-204ENST00000617222 CYP2C8P10632 490 aa18.21■□□□□ 0.51
PCDHGC3-204ENST00000617222 SLC16A2P36021 539 aa18.21■□□□□ 0.51
PCDHGC3-204ENST00000617222 IKQ13123 557 aaPredicted RBP18.21■□□□□ 0.51
PCDHGC3-204ENST00000617222 COG2Q14746 738 aa18.21■□□□□ 0.51
PCDHGC3-204ENST00000617222 ASPRV1Q53RT3 343 aa18.21■□□□□ 0.51
PCDHGC3-204ENST00000617222 GPATCH4Q5T3I0 446 aaKnown RBP18.21■□□□□ 0.51
PCDHGC3-204ENST00000617222 CTCFLQ8NI51 663 aaPredicted RBP18.21■□□□□ 0.51
PCDHGC3-204ENST00000617222 CHURC1Q8WUH1 139 aa18.21■□□□□ 0.51
PCDHGC3-204ENST00000617222 ZNF274Q96GC6 653 aaPredicted RBP18.21■□□□□ 0.51
PCDHGC3-204ENST00000617222 MAP3K14Q99558 947 aa18.21■□□□□ 0.51
PCDHGC3-204ENST00000617222 UBA5Q9GZZ9 404 aa18.21■□□□□ 0.51
PCDHGC3-204ENST00000617222 HPS5Q9UPZ3 1129 aa18.21■□□□□ 0.51
PCDHGC3-204ENST00000617222 MYH4Q9Y623 1939 aa18.21■□□□□ 0.51
PCDHGC3-204ENST00000617222 KIF5BP33176 963 aa18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 METAP2P50579 478 aaKnown RBP eCLIP18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 RCAN1P53805 252 aa18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 CCT2P78371 535 aaKnown RBP18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 STK3Q13188 491 aa18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 TAF1CQ15572 869 aaPredicted RBP18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 RTN1Q16799 776 aa18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 FAM160B2Q86V87 743 aa18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 IL27Q8NEV9 243 aa18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 KIFC2Q96AC6 838 aa18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 SLF1Q9BQI6 1058 aa18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 CPVLQ9H3G5 476 aa18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 ZCCHC17Q9NP64 241 aaKnown RBP18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 HOXC10Q9NYD6 342 aa18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 PNMA3Q9UL41 463 aa18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 LIMCH1Q9UPQ0 1083 aa18.2■□□□□ 0.5
PCDHGC3-204ENST00000617222 KLRF2D3W0D1 207 aa18.19■□□□□ 0.5
PCDHGC3-204ENST00000617222 PLA2G6O60733 806 aa18.19■□□□□ 0.5
PCDHGC3-204ENST00000617222 CD2BP2O95400 341 aaKnown RBP18.19■□□□□ 0.5
PCDHGC3-204ENST00000617222 ALDH1A1P00352 501 aa18.19■□□□□ 0.5
PCDHGC3-204ENST00000617222 DSG3P32926 999 aa18.19■□□□□ 0.5
PCDHGC3-204ENST00000617222 GNAQP50148 359 aa18.19■□□□□ 0.5
PCDHGC3-204ENST00000617222 STAT2P52630 851 aa18.19■□□□□ 0.5
PCDHGC3-204ENST00000617222 BTNL9Q6UXG8 535 aa18.19■□□□□ 0.5
PCDHGC3-204ENST00000617222 PRPF38AQ8NAV1 312 aaKnown RBP18.19■□□□□ 0.5
PCDHGC3-204ENST00000617222 PARK7Q99497 189 aaKnown RBP18.19■□□□□ 0.5
PCDHGC3-204ENST00000617222 SLKQ9H2G2 1235 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms