RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 TMTC2Q8N394 836 aa19.22■□□□□ 0.67
SPTSSB-204ENST00000617024 GMCL1P1Q8NEA9 526 aa19.22■□□□□ 0.67
SPTSSB-204ENST00000617024 C22orf23Q9BZE7 217 aa19.22■□□□□ 0.67
SPTSSB-204ENST00000617024 TM6SF1Q9BZW5 370 aa19.22■□□□□ 0.67
SPTSSB-204ENST00000617024 SLC45A1Q9Y2W3 748 aa19.22■□□□□ 0.67
SPTSSB-204ENST00000617024 WDR19Q8NEZ3 1342 aa19.22■□□□□ 0.67
SPTSSB-204ENST00000617024 MYH4Q9Y623 1939 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 USP17L15C9J2P7 530 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 USP17L13C9JLJ4 530 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 USP17L11C9JVI0 530 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 USP17L18D6R9N7 530 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 USP17L22D6RA61 530 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 USP17L17D6RBQ6 530 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 USP17L19D6RCP7 530 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 USP17L20D6RJB6 530 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 VCAM1P19320 739 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 HOXA7P31268 230 aaPredicted RBP19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 USP17L24Q0WX57 530 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 OTOP1Q7RTM1 612 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 ZSWIM6Q9HCJ5 1215 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 TRIM17Q9Y577 477 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 CYP46A1Q9Y6A2 500 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 PTPRFP10586 1907 aa19.21■□□□□ 0.67
SPTSSB-204ENST00000617024 WDR46O15213 610 aaKnown RBP19.2■□□□□ 0.66
SPTSSB-204ENST00000617024 NDUFB10O96000 172 aa19.2■□□□□ 0.66
SPTSSB-204ENST00000617024 RPS6KB1P23443 525 aa19.2■□□□□ 0.66
SPTSSB-204ENST00000617024 COL9A3Q14050 684 aaPredicted RBP19.2■□□□□ 0.66
SPTSSB-204ENST00000617024 CATSPERGQ6ZRH7 1159 aa19.2■□□□□ 0.66
SPTSSB-204ENST00000617024 RUFY3Q7L099 469 aa19.2■□□□□ 0.66
SPTSSB-204ENST00000617024 PNMA1Q8ND90 353 aa19.2■□□□□ 0.66
SPTSSB-204ENST00000617024 LRRC2Q9BYS8 371 aa19.2■□□□□ 0.66
SPTSSB-204ENST00000617024 RPAP3Q9H6T3 665 aaPredicted RBP19.2■□□□□ 0.66
SPTSSB-204ENST00000617024 MTMR7Q9Y216 660 aa19.2■□□□□ 0.66
SPTSSB-204ENST00000617024 CEP290O15078 2479 aa19.19■□□□□ 0.66
SPTSSB-204ENST00000617024 CPA1P15085 419 aa19.19■□□□□ 0.66
SPTSSB-204ENST00000617024 FGD1P98174 961 aa19.19■□□□□ 0.66
SPTSSB-204ENST00000617024 CAP1Q01518 475 aa19.19■□□□□ 0.66
SPTSSB-204ENST00000617024 TAF1CQ15572 869 aaPredicted RBP19.19■□□□□ 0.66
SPTSSB-204ENST00000617024 NFXL1Q6ZNB6 911 aa19.19■□□□□ 0.66
SPTSSB-204ENST00000617024 LY9Q9HBG7 655 aa19.19■□□□□ 0.66
SPTSSB-204ENST00000617024 ZFYVE28Q9HCC9 887 aa19.19■□□□□ 0.66
SPTSSB-204ENST00000617024 PNMA3Q9UL41 463 aa19.19■□□□□ 0.66
SPTSSB-204ENST00000617024 SH2B2O14492 632 aaPredicted RBP19.18■□□□□ 0.66
SPTSSB-204ENST00000617024 LIFRP42702 1097 aa19.18■□□□□ 0.66
SPTSSB-204ENST00000617024 SLC1A4P43007 532 aa19.18■□□□□ 0.66
SPTSSB-204ENST00000617024 IRX3P78415 501 aaPredicted RBP19.18■□□□□ 0.66
SPTSSB-204ENST00000617024 FAM83BQ5T0W9 1011 aa19.18■□□□□ 0.66
SPTSSB-204ENST00000617024 DCAF4Q8WV16 495 aa19.18■□□□□ 0.66
SPTSSB-204ENST00000617024 CHMP4CQ96CF2 233 aa19.18■□□□□ 0.66
SPTSSB-204ENST00000617024 IL17RAQ96F46 866 aa19.18■□□□□ 0.66
SPTSSB-204ENST00000617024 GMCL1Q96IK5 515 aa19.18■□□□□ 0.66
SPTSSB-204ENST00000617024 TCEANC2Q96MN5 208 aa19.18■□□□□ 0.66
SPTSSB-204ENST00000617024 TANGO6Q9C0B7 1094 aa19.18■□□□□ 0.66
SPTSSB-204ENST00000617024 ASCC2Q9H1I8 757 aaPredicted RBP19.18■□□□□ 0.66
SPTSSB-204ENST00000617024 GPHNQ9NQX3 736 aaPredicted RBP19.18■□□□□ 0.66
SPTSSB-204ENST00000617024 RANBP2P49792 3224 aaKnown RBP19.18■□□□□ 0.66
SPTSSB-204ENST00000617024 CCDC69A6NI79 296 aa19.17■□□□□ 0.66
SPTSSB-204ENST00000617024 BMP3P12645 472 aa19.17■□□□□ 0.66
SPTSSB-204ENST00000617024 RBM25P49756 843 aaKnown RBP19.17■□□□□ 0.66
SPTSSB-204ENST00000617024 FXR1P51114 621 aaKnown RBP eCLIP19.17■□□□□ 0.66
SPTSSB-204ENST00000617024 COG2Q14746 738 aa19.17■□□□□ 0.66
SPTSSB-204ENST00000617024 Q6ZUG5 572 aa19.17■□□□□ 0.66
SPTSSB-204ENST00000617024 CATIPQ7Z7H3 387 aa19.17■□□□□ 0.66
SPTSSB-204ENST00000617024 PARK7Q99497 189 aaKnown RBP19.17■□□□□ 0.66
SPTSSB-204ENST00000617024 NUP88Q99567 741 aaPredicted RBP19.17■□□□□ 0.66
SPTSSB-204ENST00000617024 P2RX7Q99572 595 aaKnown RBP19.17■□□□□ 0.66
SPTSSB-204ENST00000617024 SENP2Q9HC62 589 aa19.17■□□□□ 0.66
SPTSSB-204ENST00000617024 HOXC10Q9NYD6 342 aa19.17■□□□□ 0.66
SPTSSB-204ENST00000617024 ISY1Q9ULR0 285 aaKnown RBP19.17■□□□□ 0.66
SPTSSB-204ENST00000617024 SYNE3Q6ZMZ3 975 aa19.16■□□□□ 0.66
SPTSSB-204ENST00000617024 PDRG1Q9NUG6 133 aa19.16■□□□□ 0.66
SPTSSB-204ENST00000617024 LOC285556D6RIA3 1793 aa19.16■□□□□ 0.66
SPTSSB-204ENST00000617024 FLOT1O75955 427 aa19.15■□□□□ 0.66
SPTSSB-204ENST00000617024 CYP2C8P10632 490 aa19.15■□□□□ 0.66
SPTSSB-204ENST00000617024 PDHBP11177 359 aa19.15■□□□□ 0.66
SPTSSB-204ENST00000617024 EN2P19622 333 aaPredicted RBP19.15■□□□□ 0.66
SPTSSB-204ENST00000617024 CRHR2Q13324 411 aa19.15■□□□□ 0.66
SPTSSB-204ENST00000617024 CCDC96Q2M329 555 aa19.15■□□□□ 0.66
SPTSSB-204ENST00000617024 KCTD1Q719H9 257 aa19.15■□□□□ 0.66
SPTSSB-204ENST00000617024 CD99L2Q8TCZ2 262 aa19.15■□□□□ 0.66
SPTSSB-204ENST00000617024 SMCR8Q8TEV9 937 aaPredicted RBP19.15■□□□□ 0.66
SPTSSB-204ENST00000617024 CHURC1Q8WUH1 139 aa19.15■□□□□ 0.66
SPTSSB-204ENST00000617024 UPF3BQ9BZI7 483 aaKnown RBP19.15■□□□□ 0.66
SPTSSB-204ENST00000617024 FEM1BQ9UK73 627 aa19.15■□□□□ 0.66
SPTSSB-204ENST00000617024 PTPN22Q9Y2R2 807 aa19.15■□□□□ 0.66
SPTSSB-204ENST00000617024 TRIOBPQ9H2D6 2365 aa19.14■□□□□ 0.66
SPTSSB-204ENST00000617024 TMEM232C9JQI7 657 aa19.14■□□□□ 0.65
SPTSSB-204ENST00000617024 SNHG28P0DPA3 235 aa19.14■□□□□ 0.65
SPTSSB-204ENST00000617024 SAMD1Q6SPF0 538 aaPredicted RBP19.14■□□□□ 0.65
SPTSSB-204ENST00000617024 SGMS1Q86VZ5 419 aa19.14■□□□□ 0.65
SPTSSB-204ENST00000617024 FBXL16Q8N461 479 aa19.14■□□□□ 0.65
SPTSSB-204ENST00000617024 GPCPD1Q9NPB8 672 aa19.14■□□□□ 0.65
SPTSSB-204ENST00000617024 SLC12A7Q9Y666 1083 aa19.14■□□□□ 0.65
SPTSSB-204ENST00000617024 TLR2O60603 784 aa19.13■□□□□ 0.65
SPTSSB-204ENST00000617024 PLA2G6O60733 806 aa19.13■□□□□ 0.65
SPTSSB-204ENST00000617024 PARP1P09874 1014 aaKnown RBP19.13■□□□□ 0.65
SPTSSB-204ENST00000617024 DSG3P32926 999 aa19.13■□□□□ 0.65
SPTSSB-204ENST00000617024 GCLCP48506 637 aaPredicted RBP19.13■□□□□ 0.65
SPTSSB-204ENST00000617024 HERVK_113P62684 666 aa19.13■□□□□ 0.65
SPTSSB-204ENST00000617024 ZNF543Q08ER8 600 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms