RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 PPEF1O14829 653 aaPredicted RBP17.29■□□□□ 0.36
NOP56-220ENST00000616692 MARCH6O60337 910 aa17.29■□□□□ 0.36
NOP56-220ENST00000616692 HSPA8P11142 646 aaKnown RBP17.29■□□□□ 0.36
NOP56-220ENST00000616692 ADCY1Q08828 1119 aa17.29■□□□□ 0.36
NOP56-220ENST00000616692 PDE11AQ9HCR9 933 aa17.29■□□□□ 0.36
NOP56-220ENST00000616692 ZNF521Q96K83 1311 aa17.29■□□□□ 0.36
NOP56-220ENST00000616692 ATXN2Q99700 1313 aaKnown RBP17.29■□□□□ 0.36
NOP56-220ENST00000616692 TPPPO94811 219 aa17.28■□□□□ 0.36
NOP56-220ENST00000616692 OLFML1Q6UWY5 402 aa17.28■□□□□ 0.36
NOP56-220ENST00000616692 CEP57Q86XR8 500 aa17.28■□□□□ 0.36
NOP56-220ENST00000616692 NIM1KQ8IY84 436 aa17.28■□□□□ 0.36
NOP56-220ENST00000616692 ATP11CQ8NB49 1132 aa17.28■□□□□ 0.36
NOP56-220ENST00000616692 PANK1Q8TE04 598 aa17.28■□□□□ 0.36
NOP56-220ENST00000616692 PGAP2Q9UHJ9 254 aa17.28■□□□□ 0.36
NOP56-220ENST00000616692 ATP6V0A2Q9Y487 856 aa17.28■□□□□ 0.36
NOP56-220ENST00000616692 FERP16591 822 aa17.28■□□□□ 0.36
NOP56-220ENST00000616692 DCTN1Q14203 1278 aa17.28■□□□□ 0.36
NOP56-220ENST00000616692 MYBPC3Q14896 1274 aa17.28■□□□□ 0.36
NOP56-220ENST00000616692 YIPF3Q9GZM5 350 aa17.28■□□□□ 0.36
NOP56-220ENST00000616692 ZNF510Q9Y2H8 683 aa17.28■□□□□ 0.36
NOP56-220ENST00000616692 TRPM7Q96QT4 1865 aa17.28■□□□□ 0.36
NOP56-220ENST00000616692 CA12O43570 354 aa17.27■□□□□ 0.36
NOP56-220ENST00000616692 BBOX1O75936 387 aa17.27■□□□□ 0.36
NOP56-220ENST00000616692 POSTNQ15063 836 aa17.27■□□□□ 0.36
NOP56-220ENST00000616692 CCAR2Q8N163 923 aaKnown RBP17.27■□□□□ 0.36
NOP56-220ENST00000616692 LARGE2Q8N3Y3 721 aa17.27■□□□□ 0.36
NOP56-220ENST00000616692 DTNBP1Q96EV8 351 aa17.27■□□□□ 0.36
NOP56-220ENST00000616692 NLRP3Q96P20 1036 aa17.27■□□□□ 0.36
NOP56-220ENST00000616692 PAPOLBQ9NRJ5 636 aaKnown RBP17.27■□□□□ 0.36
NOP56-220ENST00000616692 WDR37Q9Y2I8 494 aa17.27■□□□□ 0.36
NOP56-220ENST00000616692 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.27■□□□□ 0.36
NOP56-220ENST00000616692 LTBP1Q14766 1721 aa17.27■□□□□ 0.36
NOP56-220ENST00000616692 ANKRD36CQ5JPF3 1778 aa17.27■□□□□ 0.36
NOP56-220ENST00000616692 UHMK1Q8TAS1 419 aaKnown RBP17.27■□□□□ 0.35
NOP56-220ENST00000616692 ZC3H15Q8WU90 426 aaKnown RBP17.27■□□□□ 0.35
NOP56-220ENST00000616692 ADARB2Q9NS39 739 aaKnown RBP17.27■□□□□ 0.35
NOP56-220ENST00000616692 SCNN1DP51172 638 aa17.26■□□□□ 0.35
NOP56-220ENST00000616692 SLFN5Q08AF3 891 aa17.26■□□□□ 0.35
NOP56-220ENST00000616692 SUSD4Q5VX71 490 aa17.26■□□□□ 0.35
NOP56-220ENST00000616692 CCDC70Q6NSX1 233 aa17.26■□□□□ 0.35
NOP56-220ENST00000616692 GPR161Q8N6U8 529 aaKnown RBP17.26■□□□□ 0.35
NOP56-220ENST00000616692 ZFAND2BQ8WV99 257 aa17.26■□□□□ 0.35
NOP56-220ENST00000616692 TLL2Q9Y6L7 1015 aa17.26■□□□□ 0.35
NOP56-220ENST00000616692 UBN2Q6ZU65 1347 aa17.26■□□□□ 0.35
NOP56-220ENST00000616692 GADD45BO75293 160 aaPredicted RBP17.26■□□□□ 0.35
NOP56-220ENST00000616692 COL4A5P29400 1685 aa17.26■□□□□ 0.35
NOP56-220ENST00000616692 LONRF2Q1L5Z9 754 aa17.26■□□□□ 0.35
NOP56-220ENST00000616692 MAP1SQ66K74 1059 aaPredicted RBP17.26■□□□□ 0.35
NOP56-220ENST00000616692 CCDC65Q8IXS2 484 aa17.26■□□□□ 0.35
NOP56-220ENST00000616692 BHMTQ93088 406 aa17.26■□□□□ 0.35
NOP56-220ENST00000616692 SMNDC1O75940 238 aaKnown RBP eCLIP17.25■□□□□ 0.351e-38■■■■□ 24.3
NOP56-220ENST00000616692 MMEP08473 750 aa17.25■□□□□ 0.35
NOP56-220ENST00000616692 PABPC4Q13310 644 aaKnown RBP eCLIP17.25■□□□□ 0.353e-9■□□□□ 9.5
NOP56-220ENST00000616692 KIAA0753Q2KHM9 967 aa17.25■□□□□ 0.35
NOP56-220ENST00000616692 SP8Q8IXZ3 490 aa17.25■□□□□ 0.35
NOP56-220ENST00000616692 ZGPATQ8N5A5 531 aaKnown RBP17.25■□□□□ 0.35
NOP56-220ENST00000616692 HOOK2Q96ED9 719 aa17.25■□□□□ 0.35
NOP56-220ENST00000616692 CCT5P48643 541 aa17.25■□□□□ 0.35
NOP56-220ENST00000616692 SNW1Q13573 536 aaKnown RBP17.25■□□□□ 0.35
NOP56-220ENST00000616692 CCDC92Q53HC0 331 aaPredicted RBP17.25■□□□□ 0.35
NOP56-220ENST00000616692 OLFM4Q6UX06 510 aa17.25■□□□□ 0.35
NOP56-220ENST00000616692 FAM71BQ8TC56 605 aa17.25■□□□□ 0.35
NOP56-220ENST00000616692 RUFY1Q96T51 708 aa17.25■□□□□ 0.35
NOP56-220ENST00000616692 UBAP1Q9NZ09 502 aa17.25■□□□□ 0.35
NOP56-220ENST00000616692 ZNRF3Q9ULT6 936 aa17.25■□□□□ 0.35
NOP56-220ENST00000616692 CORO1CQ9ULV4 474 aaPredicted RBP17.25■□□□□ 0.35
NOP56-220ENST00000616692 VIL1P09327 827 aaKnown RBP17.24■□□□□ 0.35
NOP56-220ENST00000616692 CUL3Q13618 768 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 CCDC50Q8IVM0 306 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 SYCP3Q8IZU3 236 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 SMYD1Q8NB12 490 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 SUGT1Q9Y2Z0 365 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.24■□□□□ 0.35
NOP56-220ENST00000616692 MBD4O95243 580 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 INHBCP55103 352 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 LRP10Q7Z4F1 713 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 CCDC150Q8NCX0 1101 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 ABT1Q9ULW3 272 aaKnown RBP17.24■□□□□ 0.35
NOP56-220ENST00000616692 SMARCA5O60264 1052 aaPredicted RBP17.24■□□□□ 0.35
NOP56-220ENST00000616692 TUBB4AP04350 444 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 ZNF75DP51815 510 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 SMTNP53814 917 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 SNCBQ16143 134 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 PLA2G4DQ86XP0 818 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 CCDC170Q8IYT3 715 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 TRMT1Q9NXH9 659 aaKnown RBP17.24■□□□□ 0.35
NOP56-220ENST00000616692 GPRC5DQ9NZD1 345 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 RRP7AQ9Y3A4 280 aaKnown RBP17.24■□□□□ 0.35
NOP56-220ENST00000616692 GJA3Q9Y6H8 435 aa17.24■□□□□ 0.35
NOP56-220ENST00000616692 LBX1P52954 281 aa17.23■□□□□ 0.35
NOP56-220ENST00000616692 EVCP57679 992 aa17.23■□□□□ 0.35
NOP56-220ENST00000616692 TNIP1Q15025 636 aa17.23■□□□□ 0.35
NOP56-220ENST00000616692 BRAPQ7Z569 592 aa17.23■□□□□ 0.35
NOP56-220ENST00000616692 LRRC8AQ8IWT6 810 aa17.23■□□□□ 0.35
NOP56-220ENST00000616692 TRIM58Q8NG06 486 aa17.23■□□□□ 0.35
NOP56-220ENST00000616692 AGBL1Q96MI9 1066 aa17.23■□□□□ 0.35
NOP56-220ENST00000616692 CORO1BQ9BR76 489 aa17.23■□□□□ 0.35
NOP56-220ENST00000616692 USP26Q9BXU7 913 aa17.23■□□□□ 0.35
NOP56-220ENST00000616692 RPSAP08865 295 aaKnown RBP17.23■□□□□ 0.35
NOP56-220ENST00000616692 SYT1P21579 422 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms